Deep divergences among inconspicuously colored clades of Epipedobates poison frogs

[Display omitted] •The poison frog genus Epipedobates is ∼11 My old and contains eight putative species.•Inconspicuous Epipedobates spp. are more deeply diverged genetically than aposematic spp.•We reorganize the E. boulengeri/espinosai species complex into four species.•We synonymize E. darwinwalla...

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Veröffentlicht in:Molecular phylogenetics and evolution 2024-06, Vol.195, p.108065-108065, Article 108065
Hauptverfasser: López-Hervas, Karem, Santos, Juan C., Ron, Santiago R., Betancourth-Cundar, Mileidy, Cannatella, David C., Tarvin, Rebecca D.
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container_title Molecular phylogenetics and evolution
container_volume 195
creator López-Hervas, Karem
Santos, Juan C.
Ron, Santiago R.
Betancourth-Cundar, Mileidy
Cannatella, David C.
Tarvin, Rebecca D.
description [Display omitted] •The poison frog genus Epipedobates is ∼11 My old and contains eight putative species.•Inconspicuous Epipedobates spp. are more deeply diverged genetically than aposematic spp.•We reorganize the E. boulengeri/espinosai species complex into four species.•We synonymize E. darwinwallacei with E. espinosai.•We provide the first genetic data for E. narinensis. Poison frogs (Dendrobatidae) are famous for their aposematic species, having a combination of diverse color patterns and defensive skin toxins, yet most species in this family are inconspicuously colored and considered non-aposematic. Epipedobates is among the youngest genus-level clades of Dendrobatidae that includes both aposematic and inconspicuous species. Using Sanger-sequenced mitochondrial and nuclear markers, we demonstrate deep genetic divergences among inconspicuous species of Epipedobates but relatively shallow genetic divergences among conspicuous species. Our phylogenetic analysis includes broad geographic sampling of the inconspicuous lineages typically identified as E. boulengeri and E. espinosai, which reveals two putative new species, one in west-central Colombia (E. sp. 1) and the other in north-central Ecuador (E. aff. espinosai). We conclude that E. darwinwallacei is a junior subjective synonym of E. espinosai. We also clarify the geographic distributions of inconspicuous Epipedobates species including the widespread E. boulengeri. We provide a qualitative assessment of the phenotypic diversity in each nominal species, with a focus on the color and pattern of inconspicuous species. We conclude that Epipedobates contains eight known valid species, six of which are inconspicuous. A relaxed molecular clock analysis suggests that the most recent common ancestor of Epipedobates is ∼11.1 million years old, which nearly doubles previous estimates. Last, genetic information points to a center of species diversity in the Chocó at the southwestern border of Colombia with Ecuador. A Spanish translation of this text is available in the supplementary materials. Las ranas venenosas (Dendrobatidae) son famosas por sus especies aposemáticas, que se caracterizan por una combinación de diversos patrones de color y toxinas cutáneas defensivas. Sin embargo, la mayoría de las especies de esta familia tienen colores inconspicuos y no se consideran aposemáticas. Epipedobates se encuentra entre los clados más jóvenes a nivel de género de Dendrobatidae que incluye especies tanto aposemáticas
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Poison frogs (Dendrobatidae) are famous for their aposematic species, having a combination of diverse color patterns and defensive skin toxins, yet most species in this family are inconspicuously colored and considered non-aposematic. Epipedobates is among the youngest genus-level clades of Dendrobatidae that includes both aposematic and inconspicuous species. Using Sanger-sequenced mitochondrial and nuclear markers, we demonstrate deep genetic divergences among inconspicuous species of Epipedobates but relatively shallow genetic divergences among conspicuous species. Our phylogenetic analysis includes broad geographic sampling of the inconspicuous lineages typically identified as E. boulengeri and E. espinosai, which reveals two putative new species, one in west-central Colombia (E. sp. 1) and the other in north-central Ecuador (E. aff. espinosai). We conclude that E. darwinwallacei is a junior subjective synonym of E. espinosai. We also clarify the geographic distributions of inconspicuous Epipedobates species including the widespread E. boulengeri. We provide a qualitative assessment of the phenotypic diversity in each nominal species, with a focus on the color and pattern of inconspicuous species. We conclude that Epipedobates contains eight known valid species, six of which are inconspicuous. A relaxed molecular clock analysis suggests that the most recent common ancestor of Epipedobates is ∼11.1 million years old, which nearly doubles previous estimates. Last, genetic information points to a center of species diversity in the Chocó at the southwestern border of Colombia with Ecuador. A Spanish translation of this text is available in the supplementary materials. Las ranas venenosas (Dendrobatidae) son famosas por sus especies aposemáticas, que se caracterizan por una combinación de diversos patrones de color y toxinas cutáneas defensivas. Sin embargo, la mayoría de las especies de esta familia tienen colores inconspicuos y no se consideran aposemáticas. Epipedobates se encuentra entre los clados más jóvenes a nivel de género de Dendrobatidae que incluye especies tanto aposemáticas como inconspicuos. Usando marcadores mitocondriales y nucleares, demostramos profundas divergencias genéticas entre especies inconspicuos de Epipedobates pero divergencias genéticas relativamente superficiales entre especies conspicuas. Nuestro análisis filogenético incluye un amplio muestreo geográfico de los linajes inconspicuos típicamente identificados como E. boulengeri y E. espinosai. Los resultados revelan dos nuevas especies putativas, una en el centro-oeste de Colombia (E. sp. 1) y la otra en el centro-norte de Ecuador (E. aff. espinosai). Determinamos que E. darwinwallacei es un sinónimo subjetivo menor de E. espinosai y aclaramos las distribuciones geográficas de las especies inconspicuos de Epipedobates, incluyendo E. boulengeri. Con una evaluación cualitativa enfocado en el color y el patrón de las especies inconspicuas describimos la diversidad fenotípica en cada especie nominal. Concluimos que el género Epipedobates contiene ocho especies válidas conocidas, seis de las cuales son en su mayoría inconspicuas. Un análisis de reloj molecular relajado nos sugiere que el ancestro común más reciente de Epipedobates tiene ∼11,1 millones de años, lo que casi duplica las estimaciones anteriores. Por último, la información genética apunta a un centro de diversidad de especies en el Chocó en la frontera suroeste de Colombia con Ecuador. Una traducción al español de este texto está disponible en los materiales suplementarios.</description><identifier>ISSN: 1055-7903</identifier><identifier>EISSN: 1095-9513</identifier><identifier>DOI: 10.1016/j.ympev.2024.108065</identifier><identifier>PMID: 38531492</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>ancestry ; aposematic species ; Aposematism ; Colombia ; color ; Cryptic species ; Ecuador ; Epipedobates ; family ; Genetic divergence ; mimicry (behavior) ; mitochondria ; new species ; phenotypic variation ; Phylogenetics ; phylogeny ; Polytypic species ; species ; Species delimitation ; species diversity</subject><ispartof>Molecular phylogenetics and evolution, 2024-06, Vol.195, p.108065-108065, Article 108065</ispartof><rights>2024 The Author(s)</rights><rights>Copyright © 2024 The Author(s). Published by Elsevier Inc. All rights reserved.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c437t-b81d56507963842706a83873c7e4964ba8c4e50043db51e554d7cbdac0389e0d3</citedby><cites>FETCH-LOGICAL-c437t-b81d56507963842706a83873c7e4964ba8c4e50043db51e554d7cbdac0389e0d3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S1055790324000575$$EHTML$$P50$$Gelsevier$$Hfree_for_read</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38531492$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>López-Hervas, Karem</creatorcontrib><creatorcontrib>Santos, Juan C.</creatorcontrib><creatorcontrib>Ron, Santiago R.</creatorcontrib><creatorcontrib>Betancourth-Cundar, Mileidy</creatorcontrib><creatorcontrib>Cannatella, David C.</creatorcontrib><creatorcontrib>Tarvin, Rebecca D.</creatorcontrib><title>Deep divergences among inconspicuously colored clades of Epipedobates poison frogs</title><title>Molecular phylogenetics and evolution</title><addtitle>Mol Phylogenet Evol</addtitle><description>[Display omitted] •The poison frog genus Epipedobates is ∼11 My old and contains eight putative species.•Inconspicuous Epipedobates spp. are more deeply diverged genetically than aposematic spp.•We reorganize the E. boulengeri/espinosai species complex into four species.•We synonymize E. darwinwallacei with E. espinosai.•We provide the first genetic data for E. narinensis. Poison frogs (Dendrobatidae) are famous for their aposematic species, having a combination of diverse color patterns and defensive skin toxins, yet most species in this family are inconspicuously colored and considered non-aposematic. Epipedobates is among the youngest genus-level clades of Dendrobatidae that includes both aposematic and inconspicuous species. Using Sanger-sequenced mitochondrial and nuclear markers, we demonstrate deep genetic divergences among inconspicuous species of Epipedobates but relatively shallow genetic divergences among conspicuous species. Our phylogenetic analysis includes broad geographic sampling of the inconspicuous lineages typically identified as E. boulengeri and E. espinosai, which reveals two putative new species, one in west-central Colombia (E. sp. 1) and the other in north-central Ecuador (E. aff. espinosai). We conclude that E. darwinwallacei is a junior subjective synonym of E. espinosai. We also clarify the geographic distributions of inconspicuous Epipedobates species including the widespread E. boulengeri. We provide a qualitative assessment of the phenotypic diversity in each nominal species, with a focus on the color and pattern of inconspicuous species. We conclude that Epipedobates contains eight known valid species, six of which are inconspicuous. A relaxed molecular clock analysis suggests that the most recent common ancestor of Epipedobates is ∼11.1 million years old, which nearly doubles previous estimates. Last, genetic information points to a center of species diversity in the Chocó at the southwestern border of Colombia with Ecuador. A Spanish translation of this text is available in the supplementary materials. Las ranas venenosas (Dendrobatidae) son famosas por sus especies aposemáticas, que se caracterizan por una combinación de diversos patrones de color y toxinas cutáneas defensivas. Sin embargo, la mayoría de las especies de esta familia tienen colores inconspicuos y no se consideran aposemáticas. Epipedobates se encuentra entre los clados más jóvenes a nivel de género de Dendrobatidae que incluye especies tanto aposemáticas como inconspicuos. Usando marcadores mitocondriales y nucleares, demostramos profundas divergencias genéticas entre especies inconspicuos de Epipedobates pero divergencias genéticas relativamente superficiales entre especies conspicuas. Nuestro análisis filogenético incluye un amplio muestreo geográfico de los linajes inconspicuos típicamente identificados como E. boulengeri y E. espinosai. Los resultados revelan dos nuevas especies putativas, una en el centro-oeste de Colombia (E. sp. 1) y la otra en el centro-norte de Ecuador (E. aff. espinosai). Determinamos que E. darwinwallacei es un sinónimo subjetivo menor de E. espinosai y aclaramos las distribuciones geográficas de las especies inconspicuos de Epipedobates, incluyendo E. boulengeri. Con una evaluación cualitativa enfocado en el color y el patrón de las especies inconspicuas describimos la diversidad fenotípica en cada especie nominal. Concluimos que el género Epipedobates contiene ocho especies válidas conocidas, seis de las cuales son en su mayoría inconspicuas. Un análisis de reloj molecular relajado nos sugiere que el ancestro común más reciente de Epipedobates tiene ∼11,1 millones de años, lo que casi duplica las estimaciones anteriores. Por último, la información genética apunta a un centro de diversidad de especies en el Chocó en la frontera suroeste de Colombia con Ecuador. Una traducción al español de este texto está disponible en los materiales suplementarios.</description><subject>ancestry</subject><subject>aposematic species</subject><subject>Aposematism</subject><subject>Colombia</subject><subject>color</subject><subject>Cryptic species</subject><subject>Ecuador</subject><subject>Epipedobates</subject><subject>family</subject><subject>Genetic divergence</subject><subject>mimicry (behavior)</subject><subject>mitochondria</subject><subject>new species</subject><subject>phenotypic variation</subject><subject>Phylogenetics</subject><subject>phylogeny</subject><subject>Polytypic species</subject><subject>species</subject><subject>Species delimitation</subject><subject>species diversity</subject><issn>1055-7903</issn><issn>1095-9513</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><recordid>eNqFkEtLxDAQgIMovn-BID166TppkjY5eBDfIAii55Ams0uWtqnJ7sL-e7OuetTTZIZvMjMfIWcUJhRofTmfrPsRV5MKKp4rEmqxQw4pKFEqQdnu5i1E2ShgB-QopTkApUKJfXLApGCUq-qQvN4ijoXzK4wzHCymwvRhmBV-sGFIo7fLsEzdurChCxFdYTvjMhSmxd3oR3ShNYucj8GnMBTTGGbphOxNTZfw9Dsek_f7u7ebx_L55eHp5vq5tJw1i7KV1IlaQKNqJnnVQG0kkw2zDXJV89ZIy1EAcOZaQVEI7hrbOmOBSYXg2DG52P47xvCxxLTQvU8Wu84MmJfWjOYjhaqq6n8UgHEmKaszyraojSGliFM9Rt-buNYU9Ma7nusv73rjXW-9567z7wHLtkf32_MjOgNXWwCzkZXHqJP1G-HOR7QL7YL_c8AnAlmUbw</recordid><startdate>20240601</startdate><enddate>20240601</enddate><creator>López-Hervas, Karem</creator><creator>Santos, Juan C.</creator><creator>Ron, Santiago R.</creator><creator>Betancourth-Cundar, Mileidy</creator><creator>Cannatella, David C.</creator><creator>Tarvin, Rebecca D.</creator><general>Elsevier Inc</general><scope>6I.</scope><scope>AAFTH</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7S9</scope><scope>L.6</scope></search><sort><creationdate>20240601</creationdate><title>Deep divergences among inconspicuously colored clades of Epipedobates poison frogs</title><author>López-Hervas, Karem ; Santos, Juan C. ; Ron, Santiago R. ; Betancourth-Cundar, Mileidy ; Cannatella, David C. ; Tarvin, Rebecca D.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c437t-b81d56507963842706a83873c7e4964ba8c4e50043db51e554d7cbdac0389e0d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>ancestry</topic><topic>aposematic species</topic><topic>Aposematism</topic><topic>Colombia</topic><topic>color</topic><topic>Cryptic species</topic><topic>Ecuador</topic><topic>Epipedobates</topic><topic>family</topic><topic>Genetic divergence</topic><topic>mimicry (behavior)</topic><topic>mitochondria</topic><topic>new species</topic><topic>phenotypic variation</topic><topic>Phylogenetics</topic><topic>phylogeny</topic><topic>Polytypic species</topic><topic>species</topic><topic>Species delimitation</topic><topic>species diversity</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>López-Hervas, Karem</creatorcontrib><creatorcontrib>Santos, Juan C.</creatorcontrib><creatorcontrib>Ron, Santiago R.</creatorcontrib><creatorcontrib>Betancourth-Cundar, Mileidy</creatorcontrib><creatorcontrib>Cannatella, David C.</creatorcontrib><creatorcontrib>Tarvin, Rebecca D.</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><jtitle>Molecular phylogenetics and evolution</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>López-Hervas, Karem</au><au>Santos, Juan C.</au><au>Ron, Santiago R.</au><au>Betancourth-Cundar, Mileidy</au><au>Cannatella, David C.</au><au>Tarvin, Rebecca D.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Deep divergences among inconspicuously colored clades of Epipedobates poison frogs</atitle><jtitle>Molecular phylogenetics and evolution</jtitle><addtitle>Mol Phylogenet Evol</addtitle><date>2024-06-01</date><risdate>2024</risdate><volume>195</volume><spage>108065</spage><epage>108065</epage><pages>108065-108065</pages><artnum>108065</artnum><issn>1055-7903</issn><eissn>1095-9513</eissn><abstract>[Display omitted] •The poison frog genus Epipedobates is ∼11 My old and contains eight putative species.•Inconspicuous Epipedobates spp. are more deeply diverged genetically than aposematic spp.•We reorganize the E. boulengeri/espinosai species complex into four species.•We synonymize E. darwinwallacei with E. espinosai.•We provide the first genetic data for E. narinensis. Poison frogs (Dendrobatidae) are famous for their aposematic species, having a combination of diverse color patterns and defensive skin toxins, yet most species in this family are inconspicuously colored and considered non-aposematic. Epipedobates is among the youngest genus-level clades of Dendrobatidae that includes both aposematic and inconspicuous species. Using Sanger-sequenced mitochondrial and nuclear markers, we demonstrate deep genetic divergences among inconspicuous species of Epipedobates but relatively shallow genetic divergences among conspicuous species. Our phylogenetic analysis includes broad geographic sampling of the inconspicuous lineages typically identified as E. boulengeri and E. espinosai, which reveals two putative new species, one in west-central Colombia (E. sp. 1) and the other in north-central Ecuador (E. aff. espinosai). We conclude that E. darwinwallacei is a junior subjective synonym of E. espinosai. We also clarify the geographic distributions of inconspicuous Epipedobates species including the widespread E. boulengeri. We provide a qualitative assessment of the phenotypic diversity in each nominal species, with a focus on the color and pattern of inconspicuous species. We conclude that Epipedobates contains eight known valid species, six of which are inconspicuous. A relaxed molecular clock analysis suggests that the most recent common ancestor of Epipedobates is ∼11.1 million years old, which nearly doubles previous estimates. Last, genetic information points to a center of species diversity in the Chocó at the southwestern border of Colombia with Ecuador. A Spanish translation of this text is available in the supplementary materials. Las ranas venenosas (Dendrobatidae) son famosas por sus especies aposemáticas, que se caracterizan por una combinación de diversos patrones de color y toxinas cutáneas defensivas. Sin embargo, la mayoría de las especies de esta familia tienen colores inconspicuos y no se consideran aposemáticas. Epipedobates se encuentra entre los clados más jóvenes a nivel de género de Dendrobatidae que incluye especies tanto aposemáticas como inconspicuos. Usando marcadores mitocondriales y nucleares, demostramos profundas divergencias genéticas entre especies inconspicuos de Epipedobates pero divergencias genéticas relativamente superficiales entre especies conspicuas. Nuestro análisis filogenético incluye un amplio muestreo geográfico de los linajes inconspicuos típicamente identificados como E. boulengeri y E. espinosai. Los resultados revelan dos nuevas especies putativas, una en el centro-oeste de Colombia (E. sp. 1) y la otra en el centro-norte de Ecuador (E. aff. espinosai). Determinamos que E. darwinwallacei es un sinónimo subjetivo menor de E. espinosai y aclaramos las distribuciones geográficas de las especies inconspicuos de Epipedobates, incluyendo E. boulengeri. Con una evaluación cualitativa enfocado en el color y el patrón de las especies inconspicuas describimos la diversidad fenotípica en cada especie nominal. Concluimos que el género Epipedobates contiene ocho especies válidas conocidas, seis de las cuales son en su mayoría inconspicuas. Un análisis de reloj molecular relajado nos sugiere que el ancestro común más reciente de Epipedobates tiene ∼11,1 millones de años, lo que casi duplica las estimaciones anteriores. Por último, la información genética apunta a un centro de diversidad de especies en el Chocó en la frontera suroeste de Colombia con Ecuador. Una traducción al español de este texto está disponible en los materiales suplementarios.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>38531492</pmid><doi>10.1016/j.ympev.2024.108065</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record>
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subjects ancestry
aposematic species
Aposematism
Colombia
color
Cryptic species
Ecuador
Epipedobates
family
Genetic divergence
mimicry (behavior)
mitochondria
new species
phenotypic variation
Phylogenetics
phylogeny
Polytypic species
species
Species delimitation
species diversity
title Deep divergences among inconspicuously colored clades of Epipedobates poison frogs
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