Comparison analysis of ABCG subfamily in bamboo and the potential function of PeABCG15 in monolignol transport

Lignin is a principal component of secondary cell wall and plays vital roles in various biological processes. In this study, 68 and 42 members of ABC transporter G subfamily (ABCG) were identified in Bambusa amplexicaulis and Olyra latifolia, which were less than that of 77 in moso bamboo (Phyllosta...

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Veröffentlicht in:Plant physiology and biochemistry 2024-12, Vol.217, p.109278, Article 109278
Hauptverfasser: Li, Hui, Li, Ziyang, Yang, Kebin, Lin, Zeming, Zhu, Chenglei, Liu, Yan, Gao, Zhimin
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container_start_page 109278
container_title Plant physiology and biochemistry
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creator Li, Hui
Li, Ziyang
Yang, Kebin
Lin, Zeming
Zhu, Chenglei
Liu, Yan
Gao, Zhimin
description Lignin is a principal component of secondary cell wall and plays vital roles in various biological processes. In this study, 68 and 42 members of ABC transporter G subfamily (ABCG) were identified in Bambusa amplexicaulis and Olyra latifolia, which were less than that of 77 in moso bamboo (Phyllostachys edulis). Collinearity analysis showed that ABCGs had undergone robust purifying selection with lower functional differentiation. These ABCGs were clustered into two clades of WBC and PDR. Notably, PeABCG15 was highly expressed with the lignification of bamboo shoot. The WGCNA revealed that PeABCG15 was co-expressed with eight MYB genes, among which PeMYB203 was able to activate PeABCG15 validated by Y1H, DLR, and GUS assays. Furthermore, over-expressing PeABCG15 significantly enhanced the content of lignin and the expression levels of monolignol biosynthetic genes in Arabidopsis thaliana, conferring improved tolerance to exogenous coniferyl alcohol. Collectively, our findings elucidated the prospective contribution of PeABCG15 to monolignol transport, providing insights into the lignin biosynthesis mechanism in bamboo. •ABCG members in three bamboos species were relatively conserved.•PeMYB203 activated the expression of PeABCG15 by directly binding to its promoter.•Overexpressing PeABCG15 enhanced lignin content and conferred tolerance of exogenous monolignol in A. thaliana transgenic lines.
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In this study, 68 and 42 members of ABC transporter G subfamily (ABCG) were identified in Bambusa amplexicaulis and Olyra latifolia, which were less than that of 77 in moso bamboo (Phyllostachys edulis). Collinearity analysis showed that ABCGs had undergone robust purifying selection with lower functional differentiation. These ABCGs were clustered into two clades of WBC and PDR. Notably, PeABCG15 was highly expressed with the lignification of bamboo shoot. The WGCNA revealed that PeABCG15 was co-expressed with eight MYB genes, among which PeMYB203 was able to activate PeABCG15 validated by Y1H, DLR, and GUS assays. Furthermore, over-expressing PeABCG15 significantly enhanced the content of lignin and the expression levels of monolignol biosynthetic genes in Arabidopsis thaliana, conferring improved tolerance to exogenous coniferyl alcohol. Collectively, our findings elucidated the prospective contribution of PeABCG15 to monolignol transport, providing insights into the lignin biosynthesis mechanism in bamboo. •ABCG members in three bamboos species were relatively conserved.•PeMYB203 activated the expression of PeABCG15 by directly binding to its promoter.•Overexpressing PeABCG15 enhanced lignin content and conferred tolerance of exogenous monolignol in A. thaliana transgenic lines.</description><identifier>ISSN: 0981-9428</identifier><identifier>ISSN: 1873-2690</identifier><identifier>EISSN: 1873-2690</identifier><identifier>DOI: 10.1016/j.plaphy.2024.109278</identifier><identifier>PMID: 39536506</identifier><language>eng</language><publisher>France: Elsevier Masson SAS</publisher><subject>ABCG transporter ; Arabidopsis - genetics ; Arabidopsis - metabolism ; ATP Binding Cassette Transporter, Subfamily G - genetics ; ATP Binding Cassette Transporter, Subfamily G - metabolism ; Bamboo ; Bambusa - genetics ; Bambusa - metabolism ; Biological Transport ; Cell wall ; Gene Expression Regulation, Plant ; Lignin ; Lignin - metabolism ; Monolignol transport ; Phylogeny ; Plant Proteins - genetics ; Plant Proteins - metabolism ; Poaceae - genetics ; Poaceae - metabolism</subject><ispartof>Plant physiology and biochemistry, 2024-12, Vol.217, p.109278, Article 109278</ispartof><rights>2024 Elsevier Masson SAS</rights><rights>Copyright © 2024 Elsevier Masson SAS. 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In this study, 68 and 42 members of ABC transporter G subfamily (ABCG) were identified in Bambusa amplexicaulis and Olyra latifolia, which were less than that of 77 in moso bamboo (Phyllostachys edulis). Collinearity analysis showed that ABCGs had undergone robust purifying selection with lower functional differentiation. These ABCGs were clustered into two clades of WBC and PDR. Notably, PeABCG15 was highly expressed with the lignification of bamboo shoot. The WGCNA revealed that PeABCG15 was co-expressed with eight MYB genes, among which PeMYB203 was able to activate PeABCG15 validated by Y1H, DLR, and GUS assays. Furthermore, over-expressing PeABCG15 significantly enhanced the content of lignin and the expression levels of monolignol biosynthetic genes in Arabidopsis thaliana, conferring improved tolerance to exogenous coniferyl alcohol. Collectively, our findings elucidated the prospective contribution of PeABCG15 to monolignol transport, providing insights into the lignin biosynthesis mechanism in bamboo. •ABCG members in three bamboos species were relatively conserved.•PeMYB203 activated the expression of PeABCG15 by directly binding to its promoter.•Overexpressing PeABCG15 enhanced lignin content and conferred tolerance of exogenous monolignol in A. thaliana transgenic lines.</description><subject>ABCG transporter</subject><subject>Arabidopsis - genetics</subject><subject>Arabidopsis - metabolism</subject><subject>ATP Binding Cassette Transporter, Subfamily G - genetics</subject><subject>ATP Binding Cassette Transporter, Subfamily G - metabolism</subject><subject>Bamboo</subject><subject>Bambusa - genetics</subject><subject>Bambusa - metabolism</subject><subject>Biological Transport</subject><subject>Cell wall</subject><subject>Gene Expression Regulation, Plant</subject><subject>Lignin</subject><subject>Lignin - metabolism</subject><subject>Monolignol transport</subject><subject>Phylogeny</subject><subject>Plant Proteins - genetics</subject><subject>Plant Proteins - metabolism</subject><subject>Poaceae - genetics</subject><subject>Poaceae - metabolism</subject><issn>0981-9428</issn><issn>1873-2690</issn><issn>1873-2690</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kMtu3CAUQFHUKpmk_YOqYtmNJ4ANxptIySgvKVK6aNcI8HXDyAYXcKT5-zBy0mU3IKFzuLoHoW-UbCmh4nK_nUc9vxy2jLCmPHWslSdoQ2VbV0x05BPakE7SqmuYPEPnKe0JKWRbn6KzuuO14ERskN-FadbRpeCx9no8JJdwGPD1ze4ep8UMenLjATuPjZ5MCAXqcX4BPIcMPjs94mHxNrviF-0nHEXKj8IUfBjdn3LgHLVPc4j5C_o86DHB1_f7Av2-u_21e6ienu8fd9dPlWUNzVXTkHbg1rTWmF4Ya5uaCms6kKxnXNOBiJYzIY2GvgPOWtb0vAbeGkattLq-QD_Wf-cY_i6QsppcsjCO2kNYkqopk5IK2bGCNitqY0gpwqDm6CYdD4oSdSyt9motrY6l1Vq6aN_fJyxmgv6f9JG2AFcrAGXPVwdRJevAW-hdBJtVH9z_J7wBrnWR7g</recordid><startdate>202412</startdate><enddate>202412</enddate><creator>Li, Hui</creator><creator>Li, Ziyang</creator><creator>Yang, Kebin</creator><creator>Lin, Zeming</creator><creator>Zhu, Chenglei</creator><creator>Liu, Yan</creator><creator>Gao, Zhimin</creator><general>Elsevier Masson SAS</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0009-0001-0445-7716</orcidid></search><sort><creationdate>202412</creationdate><title>Comparison analysis of ABCG subfamily in bamboo and the potential function of PeABCG15 in monolignol transport</title><author>Li, Hui ; 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Collectively, our findings elucidated the prospective contribution of PeABCG15 to monolignol transport, providing insights into the lignin biosynthesis mechanism in bamboo. •ABCG members in three bamboos species were relatively conserved.•PeMYB203 activated the expression of PeABCG15 by directly binding to its promoter.•Overexpressing PeABCG15 enhanced lignin content and conferred tolerance of exogenous monolignol in A. thaliana transgenic lines.</abstract><cop>France</cop><pub>Elsevier Masson SAS</pub><pmid>39536506</pmid><doi>10.1016/j.plaphy.2024.109278</doi><orcidid>https://orcid.org/0009-0001-0445-7716</orcidid></addata></record>
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subjects ABCG transporter
Arabidopsis - genetics
Arabidopsis - metabolism
ATP Binding Cassette Transporter, Subfamily G - genetics
ATP Binding Cassette Transporter, Subfamily G - metabolism
Bamboo
Bambusa - genetics
Bambusa - metabolism
Biological Transport
Cell wall
Gene Expression Regulation, Plant
Lignin
Lignin - metabolism
Monolignol transport
Phylogeny
Plant Proteins - genetics
Plant Proteins - metabolism
Poaceae - genetics
Poaceae - metabolism
title Comparison analysis of ABCG subfamily in bamboo and the potential function of PeABCG15 in monolignol transport
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