Adlercreutzia wanghongyangiae sp. nov., and Adlercreutzia shanghongiae sp. nov., two new members of the genus Adlercreutzia isolated from plateau pika ( Ochotona curzoniae )
Four anaerobic, Gram-stain-positive, non-motile, non-sporulating rod-shaped bacterial strains (R7 , R21, R22 and R25 ) were isolated from the intestinal contents of plateau pika ( ) collected from the Qinghai-Tibet Plateau, PR China. The four isolates grew at between 25 and 42 °C (optimally at 35-37...
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creator | Liu, Xiaorui Ye, Lin Yang, Jing Yang, Caixin Huang, Yuyuan Pu, Ji Liu, Liyun Zhou, Huimin Ning, Shuo Cao, Linglin Xu, Jianguo |
description | Four anaerobic, Gram-stain-positive, non-motile, non-sporulating rod-shaped bacterial strains (R7
, R21, R22 and R25
) were isolated from the intestinal contents of plateau pika (
) collected from the Qinghai-Tibet Plateau, PR China. The four isolates grew at between 25 and 42 °C (optimally at 35-37 °C), and with 0.3-3.3% NaCl (w/v) [optimum, 1.3% (w/v)]. Adding l-arginine to the medium could promote their growth. Strains R7
and R21 were most closely related to
B7
(97.48% 16S rRNA gene sequence similarity). Strains R25
and R22 were most closely related to
e
DSM 19450
(98.25% 16S rRNA gene sequence similarity). The genome sequences of R7
and R25
were 2.89 and 2.90 Mb in size with 63.6 and 62.8 mol% DNA G+C contents, respectively. Phylogenetic analysis based on 16S rRNA gene sequences and core genes revealed that R7
and R21 were most closely related to
B7
and
DSM 19490
, whereas R25
and R22 were most closely related to
DSM 19450
and
ResAG-91
. R7
, R25
and the closely related species had average nucleotide identity (ANI) values of 81.9-83.2% as well as digital DNA-DNA hybridisation (dDDH) values between 27.3 and 27.9%, which clearly indicated that they represent two novel species within the genus
. For R7
and R25
, meso-diaminopimelic acid was the diagnostic diamino acid in the cell-wall peptidoglycan, and the whole cell sugars included galactose, glucose and ribose. On the basis of these results, we propose that strains R7
and R25
represent two novel species of the genus
namely
sp. nov. and
sp. nov., respectively. The type strains are R7
(=GDMCC 1.4459
=KCTC 25860
) and R25
(=GDMCC 1.4458
=KCTC 25861
). |
doi_str_mv | 10.1099/ijsem.0.006531 |
format | Article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_3112857481</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>3112857481</sourcerecordid><originalsourceid>FETCH-LOGICAL-c180t-9b2873853e08041d463735337a5c9b3b11656bfe35f0cb296d6f0ac74747905e3</originalsourceid><addsrcrecordid>eNpdkUtPwzAQhC0E4lG4ckQ-gkTDuo6d5IgqXlKlXuAcOc6mTUnsYCdU7X_iP5LSUgm0hxmtvp09DCGXDAIGSXJXLjzWAQQAUnB2QE5ZKOVQAA8P934kT8iZ9wuAfgFwTE54wiUTLDolX_d5hU477Np1qehSmdncmtmq11Ih9U1Ajf0MbqkyOf3L-vkO_gu2S0sNLmmNdYbOU1vQdo50hqbz_xJKbyvVYk4LZ2vabLzqaFO-K3pNp3puW2sU1Z1bW7N5cnNOjgpVebzY6YC8PT68jp-Hk-nTy_h-MtQshnaYZKM44rHgCDGELA8lj7jgPFJCJxnPGJNCZgVyUYDORonMZQFKR2E_CQjkA3K9zW2c_ejQt2ldeo1VpQzazqecsVEsojBmPRpsUe2s9w6LtHFlrdwqZZBuKkp_Kkoh3VbUH1ztsrusxnyP_3bCvwEf2o8i</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>3112857481</pqid></control><display><type>article</type><title>Adlercreutzia wanghongyangiae sp. nov., and Adlercreutzia shanghongiae sp. nov., two new members of the genus Adlercreutzia isolated from plateau pika ( Ochotona curzoniae )</title><source>MEDLINE</source><source>Microbiology Society</source><creator>Liu, Xiaorui ; Ye, Lin ; Yang, Jing ; Yang, Caixin ; Huang, Yuyuan ; Pu, Ji ; Liu, Liyun ; Zhou, Huimin ; Ning, Shuo ; Cao, Linglin ; Xu, Jianguo</creator><creatorcontrib>Liu, Xiaorui ; Ye, Lin ; Yang, Jing ; Yang, Caixin ; Huang, Yuyuan ; Pu, Ji ; Liu, Liyun ; Zhou, Huimin ; Ning, Shuo ; Cao, Linglin ; Xu, Jianguo</creatorcontrib><description>Four anaerobic, Gram-stain-positive, non-motile, non-sporulating rod-shaped bacterial strains (R7
, R21, R22 and R25
) were isolated from the intestinal contents of plateau pika (
) collected from the Qinghai-Tibet Plateau, PR China. The four isolates grew at between 25 and 42 °C (optimally at 35-37 °C), and with 0.3-3.3% NaCl (w/v) [optimum, 1.3% (w/v)]. Adding l-arginine to the medium could promote their growth. Strains R7
and R21 were most closely related to
B7
(97.48% 16S rRNA gene sequence similarity). Strains R25
and R22 were most closely related to
e
DSM 19450
(98.25% 16S rRNA gene sequence similarity). The genome sequences of R7
and R25
were 2.89 and 2.90 Mb in size with 63.6 and 62.8 mol% DNA G+C contents, respectively. Phylogenetic analysis based on 16S rRNA gene sequences and core genes revealed that R7
and R21 were most closely related to
B7
and
DSM 19490
, whereas R25
and R22 were most closely related to
DSM 19450
and
ResAG-91
. R7
, R25
and the closely related species had average nucleotide identity (ANI) values of 81.9-83.2% as well as digital DNA-DNA hybridisation (dDDH) values between 27.3 and 27.9%, which clearly indicated that they represent two novel species within the genus
. For R7
and R25
, meso-diaminopimelic acid was the diagnostic diamino acid in the cell-wall peptidoglycan, and the whole cell sugars included galactose, glucose and ribose. On the basis of these results, we propose that strains R7
and R25
represent two novel species of the genus
namely
sp. nov. and
sp. nov., respectively. The type strains are R7
(=GDMCC 1.4459
=KCTC 25860
) and R25
(=GDMCC 1.4458
=KCTC 25861
).</description><identifier>ISSN: 1466-5026</identifier><identifier>ISSN: 1466-5034</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijsem.0.006531</identifier><identifier>PMID: 39361517</identifier><language>eng</language><publisher>England</publisher><subject>Animals ; Bacterial Typing Techniques ; Base Composition ; China ; DNA, Bacterial - genetics ; Fatty Acids - chemistry ; Lagomorpha - microbiology ; Nucleic Acid Hybridization ; Peptidoglycan ; Phylogeny ; RNA, Ribosomal, 16S - genetics ; Sequence Analysis, DNA ; Tibet</subject><ispartof>International journal of systematic and evolutionary microbiology, 2024-10, Vol.74 (10)</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c180t-9b2873853e08041d463735337a5c9b3b11656bfe35f0cb296d6f0ac74747905e3</cites><orcidid>0000-0003-3649-8229</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>315,781,785,3747,27929,27930</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/39361517$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Liu, Xiaorui</creatorcontrib><creatorcontrib>Ye, Lin</creatorcontrib><creatorcontrib>Yang, Jing</creatorcontrib><creatorcontrib>Yang, Caixin</creatorcontrib><creatorcontrib>Huang, Yuyuan</creatorcontrib><creatorcontrib>Pu, Ji</creatorcontrib><creatorcontrib>Liu, Liyun</creatorcontrib><creatorcontrib>Zhou, Huimin</creatorcontrib><creatorcontrib>Ning, Shuo</creatorcontrib><creatorcontrib>Cao, Linglin</creatorcontrib><creatorcontrib>Xu, Jianguo</creatorcontrib><title>Adlercreutzia wanghongyangiae sp. nov., and Adlercreutzia shanghongiae sp. nov., two new members of the genus Adlercreutzia isolated from plateau pika ( Ochotona curzoniae )</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>Four anaerobic, Gram-stain-positive, non-motile, non-sporulating rod-shaped bacterial strains (R7
, R21, R22 and R25
) were isolated from the intestinal contents of plateau pika (
) collected from the Qinghai-Tibet Plateau, PR China. The four isolates grew at between 25 and 42 °C (optimally at 35-37 °C), and with 0.3-3.3% NaCl (w/v) [optimum, 1.3% (w/v)]. Adding l-arginine to the medium could promote their growth. Strains R7
and R21 were most closely related to
B7
(97.48% 16S rRNA gene sequence similarity). Strains R25
and R22 were most closely related to
e
DSM 19450
(98.25% 16S rRNA gene sequence similarity). The genome sequences of R7
and R25
were 2.89 and 2.90 Mb in size with 63.6 and 62.8 mol% DNA G+C contents, respectively. Phylogenetic analysis based on 16S rRNA gene sequences and core genes revealed that R7
and R21 were most closely related to
B7
and
DSM 19490
, whereas R25
and R22 were most closely related to
DSM 19450
and
ResAG-91
. R7
, R25
and the closely related species had average nucleotide identity (ANI) values of 81.9-83.2% as well as digital DNA-DNA hybridisation (dDDH) values between 27.3 and 27.9%, which clearly indicated that they represent two novel species within the genus
. For R7
and R25
, meso-diaminopimelic acid was the diagnostic diamino acid in the cell-wall peptidoglycan, and the whole cell sugars included galactose, glucose and ribose. On the basis of these results, we propose that strains R7
and R25
represent two novel species of the genus
namely
sp. nov. and
sp. nov., respectively. The type strains are R7
(=GDMCC 1.4459
=KCTC 25860
) and R25
(=GDMCC 1.4458
=KCTC 25861
).</description><subject>Animals</subject><subject>Bacterial Typing Techniques</subject><subject>Base Composition</subject><subject>China</subject><subject>DNA, Bacterial - genetics</subject><subject>Fatty Acids - chemistry</subject><subject>Lagomorpha - microbiology</subject><subject>Nucleic Acid Hybridization</subject><subject>Peptidoglycan</subject><subject>Phylogeny</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Sequence Analysis, DNA</subject><subject>Tibet</subject><issn>1466-5026</issn><issn>1466-5034</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpdkUtPwzAQhC0E4lG4ckQ-gkTDuo6d5IgqXlKlXuAcOc6mTUnsYCdU7X_iP5LSUgm0hxmtvp09DCGXDAIGSXJXLjzWAQQAUnB2QE5ZKOVQAA8P934kT8iZ9wuAfgFwTE54wiUTLDolX_d5hU477Np1qehSmdncmtmq11Ih9U1Ajf0MbqkyOf3L-vkO_gu2S0sNLmmNdYbOU1vQdo50hqbz_xJKbyvVYk4LZ2vabLzqaFO-K3pNp3puW2sU1Z1bW7N5cnNOjgpVebzY6YC8PT68jp-Hk-nTy_h-MtQshnaYZKM44rHgCDGELA8lj7jgPFJCJxnPGJNCZgVyUYDORonMZQFKR2E_CQjkA3K9zW2c_ejQt2ldeo1VpQzazqecsVEsojBmPRpsUe2s9w6LtHFlrdwqZZBuKkp_Kkoh3VbUH1ztsrusxnyP_3bCvwEf2o8i</recordid><startdate>202410</startdate><enddate>202410</enddate><creator>Liu, Xiaorui</creator><creator>Ye, Lin</creator><creator>Yang, Jing</creator><creator>Yang, Caixin</creator><creator>Huang, Yuyuan</creator><creator>Pu, Ji</creator><creator>Liu, Liyun</creator><creator>Zhou, Huimin</creator><creator>Ning, Shuo</creator><creator>Cao, Linglin</creator><creator>Xu, Jianguo</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0003-3649-8229</orcidid></search><sort><creationdate>202410</creationdate><title>Adlercreutzia wanghongyangiae sp. nov., and Adlercreutzia shanghongiae sp. nov., two new members of the genus Adlercreutzia isolated from plateau pika ( Ochotona curzoniae )</title><author>Liu, Xiaorui ; Ye, Lin ; Yang, Jing ; Yang, Caixin ; Huang, Yuyuan ; Pu, Ji ; Liu, Liyun ; Zhou, Huimin ; Ning, Shuo ; Cao, Linglin ; Xu, Jianguo</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c180t-9b2873853e08041d463735337a5c9b3b11656bfe35f0cb296d6f0ac74747905e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Animals</topic><topic>Bacterial Typing Techniques</topic><topic>Base Composition</topic><topic>China</topic><topic>DNA, Bacterial - genetics</topic><topic>Fatty Acids - chemistry</topic><topic>Lagomorpha - microbiology</topic><topic>Nucleic Acid Hybridization</topic><topic>Peptidoglycan</topic><topic>Phylogeny</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Sequence Analysis, DNA</topic><topic>Tibet</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Liu, Xiaorui</creatorcontrib><creatorcontrib>Ye, Lin</creatorcontrib><creatorcontrib>Yang, Jing</creatorcontrib><creatorcontrib>Yang, Caixin</creatorcontrib><creatorcontrib>Huang, Yuyuan</creatorcontrib><creatorcontrib>Pu, Ji</creatorcontrib><creatorcontrib>Liu, Liyun</creatorcontrib><creatorcontrib>Zhou, Huimin</creatorcontrib><creatorcontrib>Ning, Shuo</creatorcontrib><creatorcontrib>Cao, Linglin</creatorcontrib><creatorcontrib>Xu, Jianguo</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Liu, Xiaorui</au><au>Ye, Lin</au><au>Yang, Jing</au><au>Yang, Caixin</au><au>Huang, Yuyuan</au><au>Pu, Ji</au><au>Liu, Liyun</au><au>Zhou, Huimin</au><au>Ning, Shuo</au><au>Cao, Linglin</au><au>Xu, Jianguo</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Adlercreutzia wanghongyangiae sp. nov., and Adlercreutzia shanghongiae sp. nov., two new members of the genus Adlercreutzia isolated from plateau pika ( Ochotona curzoniae )</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2024-10</date><risdate>2024</risdate><volume>74</volume><issue>10</issue><issn>1466-5026</issn><issn>1466-5034</issn><eissn>1466-5034</eissn><abstract>Four anaerobic, Gram-stain-positive, non-motile, non-sporulating rod-shaped bacterial strains (R7
, R21, R22 and R25
) were isolated from the intestinal contents of plateau pika (
) collected from the Qinghai-Tibet Plateau, PR China. The four isolates grew at between 25 and 42 °C (optimally at 35-37 °C), and with 0.3-3.3% NaCl (w/v) [optimum, 1.3% (w/v)]. Adding l-arginine to the medium could promote their growth. Strains R7
and R21 were most closely related to
B7
(97.48% 16S rRNA gene sequence similarity). Strains R25
and R22 were most closely related to
e
DSM 19450
(98.25% 16S rRNA gene sequence similarity). The genome sequences of R7
and R25
were 2.89 and 2.90 Mb in size with 63.6 and 62.8 mol% DNA G+C contents, respectively. Phylogenetic analysis based on 16S rRNA gene sequences and core genes revealed that R7
and R21 were most closely related to
B7
and
DSM 19490
, whereas R25
and R22 were most closely related to
DSM 19450
and
ResAG-91
. R7
, R25
and the closely related species had average nucleotide identity (ANI) values of 81.9-83.2% as well as digital DNA-DNA hybridisation (dDDH) values between 27.3 and 27.9%, which clearly indicated that they represent two novel species within the genus
. For R7
and R25
, meso-diaminopimelic acid was the diagnostic diamino acid in the cell-wall peptidoglycan, and the whole cell sugars included galactose, glucose and ribose. On the basis of these results, we propose that strains R7
and R25
represent two novel species of the genus
namely
sp. nov. and
sp. nov., respectively. The type strains are R7
(=GDMCC 1.4459
=KCTC 25860
) and R25
(=GDMCC 1.4458
=KCTC 25861
).</abstract><cop>England</cop><pmid>39361517</pmid><doi>10.1099/ijsem.0.006531</doi><orcidid>https://orcid.org/0000-0003-3649-8229</orcidid></addata></record> |
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source | MEDLINE; Microbiology Society |
subjects | Animals Bacterial Typing Techniques Base Composition China DNA, Bacterial - genetics Fatty Acids - chemistry Lagomorpha - microbiology Nucleic Acid Hybridization Peptidoglycan Phylogeny RNA, Ribosomal, 16S - genetics Sequence Analysis, DNA Tibet |
title | Adlercreutzia wanghongyangiae sp. nov., and Adlercreutzia shanghongiae sp. nov., two new members of the genus Adlercreutzia isolated from plateau pika ( Ochotona curzoniae ) |
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