Multiomics Combined with Expression Pattern Analysis Reveals the Regulatory Response of Key Genes in Potato Jasmonic Acid Signaling Pathways to Cadmium Stress
Jasmonic acid (JA) is an endogenous phytohormone that regulates plant physiological metabolism and stress response processes, either independently or through hormone crosstalk. Our phytohormone assay and transcriptome–metabolome analysis revealed the key genes and metabolites involved in the JA path...
Gespeichert in:
Veröffentlicht in: | Journal of agricultural and food chemistry 2024-10, Vol.72 (40), p.22369-22384 |
---|---|
Hauptverfasser: | , , , , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 22384 |
---|---|
container_issue | 40 |
container_start_page | 22369 |
container_title | Journal of agricultural and food chemistry |
container_volume | 72 |
creator | Yang, Mingfang Yang, Sanwei Wang, Weidong Wei, Xiaoliao Lou, Fei He, GuanDi He, Tengbing |
description | Jasmonic acid (JA) is an endogenous phytohormone that regulates plant physiological metabolism and stress response processes, either independently or through hormone crosstalk. Our phytohormone assay and transcriptome–metabolome analysis revealed the key genes and metabolites involved in the JA pathway in response to 0–250 μM cadmium (Cd) in potato seedlings. Transcriptome gene set enrichment and gene ontology analysis indicated that JA-related genes were significantly enriched. Specifically, members from the StOPR and StJAZ gene families showed pronounced responses to Cd stress and methyl jasmonate treatment. As a negative regulatory transcription factor of the JA signaling pathway, StJAZ14 exhibited a decreasing trend under Cd stress. Yeast two-hybrid assay identified an interaction between StJAZ14 and StBZR1, which is located on the brassinolide pathway. In addition to unveiling the critical role of the JA pathway in regulating potato response to Cd stress, the functional mechanism was preliminarily explored. |
doi_str_mv | 10.1021/acs.jafc.4c04883 |
format | Article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_3110405792</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>3110405792</sourcerecordid><originalsourceid>FETCH-LOGICAL-a219t-2144b0c8a4062fa8f3b624c5ab72acace01d024e02a12b5e30e03659678c5c873</originalsourceid><addsrcrecordid>eNp1kU2P0zAQhi0EYsvCnRPykQMpYzsfzrGqluVjEYiFc-Q4k9arxC4ZhyV_ht-KSws3TjOH531Gmpex5wLWAqR4bSyt70xv17mFXGv1gK1EISErhNAP2QoSk-miFBfsCdEdAOiigsfsQtVK1kqJFfv1cR6iC6OzxLdhbJ3Hjt-7uOdXPw8TErng-WcTI06eb7wZFnLEv-APNAPxuMe07-bBxDAtaaVD8IQ89PwDLvwaPRJ3SRBiIvh7Q2PwzvKNdR2_dbvkc3539O_vzZJ8gW9NN7p55LfxeP0pe9SnQ_jsPC_ZtzdXX7dvs5tP1--2m5vMSFHHTIo8b8Fqk0Mpe6N71ZYyt4VpK2mssQiiA5kjSCNkW6ACBFUWdVlpW1hdqUv28uQ9TOH7jBSb0ZHFYTAew0yNEgJyKKpaJhROqJ0C0YR9c5jcaKalEdAcW2lSK82xlebcSoq8ONvndsTuX-BvDQl4dQL-RMM8pcfQ_32_AdNEmxk</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>3110405792</pqid></control><display><type>article</type><title>Multiomics Combined with Expression Pattern Analysis Reveals the Regulatory Response of Key Genes in Potato Jasmonic Acid Signaling Pathways to Cadmium Stress</title><source>ACS Publications</source><creator>Yang, Mingfang ; Yang, Sanwei ; Wang, Weidong ; Wei, Xiaoliao ; Lou, Fei ; He, GuanDi ; He, Tengbing</creator><creatorcontrib>Yang, Mingfang ; Yang, Sanwei ; Wang, Weidong ; Wei, Xiaoliao ; Lou, Fei ; He, GuanDi ; He, Tengbing</creatorcontrib><description>Jasmonic acid (JA) is an endogenous phytohormone that regulates plant physiological metabolism and stress response processes, either independently or through hormone crosstalk. Our phytohormone assay and transcriptome–metabolome analysis revealed the key genes and metabolites involved in the JA pathway in response to 0–250 μM cadmium (Cd) in potato seedlings. Transcriptome gene set enrichment and gene ontology analysis indicated that JA-related genes were significantly enriched. Specifically, members from the StOPR and StJAZ gene families showed pronounced responses to Cd stress and methyl jasmonate treatment. As a negative regulatory transcription factor of the JA signaling pathway, StJAZ14 exhibited a decreasing trend under Cd stress. Yeast two-hybrid assay identified an interaction between StJAZ14 and StBZR1, which is located on the brassinolide pathway. In addition to unveiling the critical role of the JA pathway in regulating potato response to Cd stress, the functional mechanism was preliminarily explored.</description><identifier>ISSN: 0021-8561</identifier><identifier>ISSN: 1520-5118</identifier><identifier>EISSN: 1520-5118</identifier><identifier>DOI: 10.1021/acs.jafc.4c04883</identifier><identifier>PMID: 39329331</identifier><language>eng</language><publisher>United States: American Chemical Society</publisher><subject>Omics Technologies Applied to Agriculture and Food</subject><ispartof>Journal of agricultural and food chemistry, 2024-10, Vol.72 (40), p.22369-22384</ispartof><rights>2024 American Chemical Society</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-a219t-2144b0c8a4062fa8f3b624c5ab72acace01d024e02a12b5e30e03659678c5c873</cites><orcidid>0000-0002-6720-3369</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://pubs.acs.org/doi/pdf/10.1021/acs.jafc.4c04883$$EPDF$$P50$$Gacs$$H</linktopdf><linktohtml>$$Uhttps://pubs.acs.org/doi/10.1021/acs.jafc.4c04883$$EHTML$$P50$$Gacs$$H</linktohtml><link.rule.ids>315,781,785,2766,27081,27929,27930,56743,56793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/39329331$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Yang, Mingfang</creatorcontrib><creatorcontrib>Yang, Sanwei</creatorcontrib><creatorcontrib>Wang, Weidong</creatorcontrib><creatorcontrib>Wei, Xiaoliao</creatorcontrib><creatorcontrib>Lou, Fei</creatorcontrib><creatorcontrib>He, GuanDi</creatorcontrib><creatorcontrib>He, Tengbing</creatorcontrib><title>Multiomics Combined with Expression Pattern Analysis Reveals the Regulatory Response of Key Genes in Potato Jasmonic Acid Signaling Pathways to Cadmium Stress</title><title>Journal of agricultural and food chemistry</title><addtitle>J. Agric. Food Chem</addtitle><description>Jasmonic acid (JA) is an endogenous phytohormone that regulates plant physiological metabolism and stress response processes, either independently or through hormone crosstalk. Our phytohormone assay and transcriptome–metabolome analysis revealed the key genes and metabolites involved in the JA pathway in response to 0–250 μM cadmium (Cd) in potato seedlings. Transcriptome gene set enrichment and gene ontology analysis indicated that JA-related genes were significantly enriched. Specifically, members from the StOPR and StJAZ gene families showed pronounced responses to Cd stress and methyl jasmonate treatment. As a negative regulatory transcription factor of the JA signaling pathway, StJAZ14 exhibited a decreasing trend under Cd stress. Yeast two-hybrid assay identified an interaction between StJAZ14 and StBZR1, which is located on the brassinolide pathway. In addition to unveiling the critical role of the JA pathway in regulating potato response to Cd stress, the functional mechanism was preliminarily explored.</description><subject>Omics Technologies Applied to Agriculture and Food</subject><issn>0021-8561</issn><issn>1520-5118</issn><issn>1520-5118</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><recordid>eNp1kU2P0zAQhi0EYsvCnRPykQMpYzsfzrGqluVjEYiFc-Q4k9arxC4ZhyV_ht-KSws3TjOH531Gmpex5wLWAqR4bSyt70xv17mFXGv1gK1EISErhNAP2QoSk-miFBfsCdEdAOiigsfsQtVK1kqJFfv1cR6iC6OzxLdhbJ3Hjt-7uOdXPw8TErng-WcTI06eb7wZFnLEv-APNAPxuMe07-bBxDAtaaVD8IQ89PwDLvwaPRJ3SRBiIvh7Q2PwzvKNdR2_dbvkc3539O_vzZJ8gW9NN7p55LfxeP0pe9SnQ_jsPC_ZtzdXX7dvs5tP1--2m5vMSFHHTIo8b8Fqk0Mpe6N71ZYyt4VpK2mssQiiA5kjSCNkW6ACBFUWdVlpW1hdqUv28uQ9TOH7jBSb0ZHFYTAew0yNEgJyKKpaJhROqJ0C0YR9c5jcaKalEdAcW2lSK82xlebcSoq8ONvndsTuX-BvDQl4dQL-RMM8pcfQ_32_AdNEmxk</recordid><startdate>20241009</startdate><enddate>20241009</enddate><creator>Yang, Mingfang</creator><creator>Yang, Sanwei</creator><creator>Wang, Weidong</creator><creator>Wei, Xiaoliao</creator><creator>Lou, Fei</creator><creator>He, GuanDi</creator><creator>He, Tengbing</creator><general>American Chemical Society</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-6720-3369</orcidid></search><sort><creationdate>20241009</creationdate><title>Multiomics Combined with Expression Pattern Analysis Reveals the Regulatory Response of Key Genes in Potato Jasmonic Acid Signaling Pathways to Cadmium Stress</title><author>Yang, Mingfang ; Yang, Sanwei ; Wang, Weidong ; Wei, Xiaoliao ; Lou, Fei ; He, GuanDi ; He, Tengbing</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a219t-2144b0c8a4062fa8f3b624c5ab72acace01d024e02a12b5e30e03659678c5c873</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Omics Technologies Applied to Agriculture and Food</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Yang, Mingfang</creatorcontrib><creatorcontrib>Yang, Sanwei</creatorcontrib><creatorcontrib>Wang, Weidong</creatorcontrib><creatorcontrib>Wei, Xiaoliao</creatorcontrib><creatorcontrib>Lou, Fei</creatorcontrib><creatorcontrib>He, GuanDi</creatorcontrib><creatorcontrib>He, Tengbing</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of agricultural and food chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Yang, Mingfang</au><au>Yang, Sanwei</au><au>Wang, Weidong</au><au>Wei, Xiaoliao</au><au>Lou, Fei</au><au>He, GuanDi</au><au>He, Tengbing</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Multiomics Combined with Expression Pattern Analysis Reveals the Regulatory Response of Key Genes in Potato Jasmonic Acid Signaling Pathways to Cadmium Stress</atitle><jtitle>Journal of agricultural and food chemistry</jtitle><addtitle>J. Agric. Food Chem</addtitle><date>2024-10-09</date><risdate>2024</risdate><volume>72</volume><issue>40</issue><spage>22369</spage><epage>22384</epage><pages>22369-22384</pages><issn>0021-8561</issn><issn>1520-5118</issn><eissn>1520-5118</eissn><abstract>Jasmonic acid (JA) is an endogenous phytohormone that regulates plant physiological metabolism and stress response processes, either independently or through hormone crosstalk. Our phytohormone assay and transcriptome–metabolome analysis revealed the key genes and metabolites involved in the JA pathway in response to 0–250 μM cadmium (Cd) in potato seedlings. Transcriptome gene set enrichment and gene ontology analysis indicated that JA-related genes were significantly enriched. Specifically, members from the StOPR and StJAZ gene families showed pronounced responses to Cd stress and methyl jasmonate treatment. As a negative regulatory transcription factor of the JA signaling pathway, StJAZ14 exhibited a decreasing trend under Cd stress. Yeast two-hybrid assay identified an interaction between StJAZ14 and StBZR1, which is located on the brassinolide pathway. In addition to unveiling the critical role of the JA pathway in regulating potato response to Cd stress, the functional mechanism was preliminarily explored.</abstract><cop>United States</cop><pub>American Chemical Society</pub><pmid>39329331</pmid><doi>10.1021/acs.jafc.4c04883</doi><tpages>16</tpages><orcidid>https://orcid.org/0000-0002-6720-3369</orcidid></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0021-8561 |
ispartof | Journal of agricultural and food chemistry, 2024-10, Vol.72 (40), p.22369-22384 |
issn | 0021-8561 1520-5118 1520-5118 |
language | eng |
recordid | cdi_proquest_miscellaneous_3110405792 |
source | ACS Publications |
subjects | Omics Technologies Applied to Agriculture and Food |
title | Multiomics Combined with Expression Pattern Analysis Reveals the Regulatory Response of Key Genes in Potato Jasmonic Acid Signaling Pathways to Cadmium Stress |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-15T01%3A57%3A39IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Multiomics%20Combined%20with%20Expression%20Pattern%20Analysis%20Reveals%20the%20Regulatory%20Response%20of%20Key%20Genes%20in%20Potato%20Jasmonic%20Acid%20Signaling%20Pathways%20to%20Cadmium%20Stress&rft.jtitle=Journal%20of%20agricultural%20and%20food%20chemistry&rft.au=Yang,%20Mingfang&rft.date=2024-10-09&rft.volume=72&rft.issue=40&rft.spage=22369&rft.epage=22384&rft.pages=22369-22384&rft.issn=0021-8561&rft.eissn=1520-5118&rft_id=info:doi/10.1021/acs.jafc.4c04883&rft_dat=%3Cproquest_cross%3E3110405792%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=3110405792&rft_id=info:pmid/39329331&rfr_iscdi=true |