The MYB transcription factor PpMYB5 regulates Pp4CL1/Pp4CL2 expression to promote lignin biosynthesis of fruit russeting in the flat nectarine
Key message Transcription factor PpMYB5 promotes lignin synthesis by directly binding to the Pp4CL1/Pp4CL2 promoter and affecting their expression, which may be related to nectarine russeting formation. Nectarine russeting is usually considered to be a non-invasive physiological disease that usually...
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| Veröffentlicht in: | Plant cell reports 2024-10, Vol.43 (10), p.231-231, Article 231 |
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| creator | Miao, Yule Duan, Wenyi Li, Ang Yuan, Mingzhu Meng, Junren Wang, Hongmei Pan, Lei Sun, Shihang Cui, Guochao Shi, Caiyun Niu, Liang Zeng, Wenfang |
| description | Key message
Transcription factor PpMYB5 promotes lignin synthesis by directly binding to the
Pp4CL1/Pp4CL2
promoter and affecting their expression, which may be related to nectarine russeting formation.
Nectarine russeting is usually considered to be a non-invasive physiological disease that usually occurs on late-maturing cultivars and seriously affects their appearance quality and commercial value. The cause of nectarine fruit rust is currently unknown. In this study, we compared two flat nectarine cultivars, ‘zhongyoupanweidi’ (HD; russeting-free cultivar) and ‘zhongyoupanweihou’ (TH; russeting-prone cultivar), with respect to nectarine russeting by means of microscopy, transcriptomics, and hormone analysis. Compared to HD fruits, TH fruits had a broken cuticle, missing wax layer, and heavy lignin deposition. RNA sequencing (RNA-seq) revealed significant alternations in the expression of genes related to lignin synthesis. Moreover, structure genes
Pp4CL1
and
Pp4CL2
, MYB transcription factor (TF) gene
PpMYB5
were identified through weighted gene co-expression network analysis (WGCNA). Molecular experiments and transgenic evidence suggested that PpMYB5 regulates
Pp4CL1
/
Pp4CL2
expression to promote lignin synthesis. Overall, in addition to providing new insights into the formation of mechanisms for nectarine russeting, our study also establishes a foundation for nectarine russeting prevention. |
| doi_str_mv | 10.1007/s00299-024-03321-9 |
| format | Article |
| fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_3104819488</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>3104819488</sourcerecordid><originalsourceid>FETCH-LOGICAL-c289t-494d64e20e79433f4c8842003dc300a409b6ffd37858469930cdfb6955acd59b3</originalsourceid><addsrcrecordid>eNqNkUuLFDEUhYMoTjv6B1xIwI2bcm4e9chSm_EBLboYQVdFVeqmJ0N10uamwPkT_mbT3aOCC3F14Z7vnNxwGHsq4KUAaC8IQBpTgdQVKCVFZe6xldBKVhLUl_tsBW1Ztq3QZ-wR0Q1AEdvmITtTRraNVGbFflxdI__w9TXPaQhkk99nHwN3g80x8U_7ItU84XaZh4xUFnq9ERfHITl-3yckOhhy5PsUdzEjn_02-MBHH-k25GskTzw67tLiM08LEWYftrwgReSuBPOANg_JB3zMHrhhJnxyN8_Z5zeXV-t31ebj2_frV5vKys7kShs9NRolYGu0Uk7brtMSQE1WAQwazNg4N6m2qzvdGKPATm5sTF0PdqrNqM7Zi1NuOfrbgpT7nSeL8zwEjAv1StSqrU1Xw3-goDthdNcV9Plf6E1cUigfOVKNaBptCiVPlE2RKKHr98nvhnTbC-gPxfanYvtSbH8stj-Ynt1FL-MOp9-WX00WQJ0AKlLYYvrz9j9ifwI9ta1-</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>3104616649</pqid></control><display><type>article</type><title>The MYB transcription factor PpMYB5 regulates Pp4CL1/Pp4CL2 expression to promote lignin biosynthesis of fruit russeting in the flat nectarine</title><source>MEDLINE</source><source>Springer Nature - Complete Springer Journals</source><creator>Miao, Yule ; Duan, Wenyi ; Li, Ang ; Yuan, Mingzhu ; Meng, Junren ; Wang, Hongmei ; Pan, Lei ; Sun, Shihang ; Cui, Guochao ; Shi, Caiyun ; Niu, Liang ; Zeng, Wenfang</creator><creatorcontrib>Miao, Yule ; Duan, Wenyi ; Li, Ang ; Yuan, Mingzhu ; Meng, Junren ; Wang, Hongmei ; Pan, Lei ; Sun, Shihang ; Cui, Guochao ; Shi, Caiyun ; Niu, Liang ; Zeng, Wenfang</creatorcontrib><description>Key message
Transcription factor PpMYB5 promotes lignin synthesis by directly binding to the
Pp4CL1/Pp4CL2
promoter and affecting their expression, which may be related to nectarine russeting formation.
Nectarine russeting is usually considered to be a non-invasive physiological disease that usually occurs on late-maturing cultivars and seriously affects their appearance quality and commercial value. The cause of nectarine fruit rust is currently unknown. In this study, we compared two flat nectarine cultivars, ‘zhongyoupanweidi’ (HD; russeting-free cultivar) and ‘zhongyoupanweihou’ (TH; russeting-prone cultivar), with respect to nectarine russeting by means of microscopy, transcriptomics, and hormone analysis. Compared to HD fruits, TH fruits had a broken cuticle, missing wax layer, and heavy lignin deposition. RNA sequencing (RNA-seq) revealed significant alternations in the expression of genes related to lignin synthesis. Moreover, structure genes
Pp4CL1
and
Pp4CL2
, MYB transcription factor (TF) gene
PpMYB5
were identified through weighted gene co-expression network analysis (WGCNA). Molecular experiments and transgenic evidence suggested that PpMYB5 regulates
Pp4CL1
/
Pp4CL2
expression to promote lignin synthesis. Overall, in addition to providing new insights into the formation of mechanisms for nectarine russeting, our study also establishes a foundation for nectarine russeting prevention.</description><identifier>ISSN: 0721-7714</identifier><identifier>ISSN: 1432-203X</identifier><identifier>EISSN: 1432-203X</identifier><identifier>DOI: 10.1007/s00299-024-03321-9</identifier><identifier>PMID: 39276239</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Alternations ; Biomedical and Life Sciences ; Biosynthesis ; Biotechnology ; Cell Biology ; Chemical synthesis ; Cultivars ; Fruit - genetics ; Fruit - metabolism ; Fruits ; Gene expression ; Gene Expression Regulation, Plant ; Gene sequencing ; Genes ; genetically modified organisms ; Life Sciences ; Lignin ; Lignin - biosynthesis ; Lignin - metabolism ; microscopy ; nectarines ; Network analysis ; Original Article ; Physiological effects ; Plant Biochemistry ; Plant cuticle ; Plant Diseases - genetics ; Plant Diseases - microbiology ; Plant Proteins - genetics ; Plant Proteins - metabolism ; Plant Sciences ; Plants, Genetically Modified ; Promoter Regions, Genetic - genetics ; Prunus persica nucipersica ; Ribonucleic acid ; RNA ; Rust fungi ; sequence analysis ; Transcription ; Transcription factors ; Transcription Factors - genetics ; Transcription Factors - metabolism ; Transcriptomics</subject><ispartof>Plant cell reports, 2024-10, Vol.43 (10), p.231-231, Article 231</ispartof><rights>The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature 2024. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.</rights><rights>2024. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c289t-494d64e20e79433f4c8842003dc300a409b6ffd37858469930cdfb6955acd59b3</cites><orcidid>0000-0002-7792-4725 ; 0000-0001-6232-4877</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00299-024-03321-9$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00299-024-03321-9$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27903,27904,41467,42536,51298</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/39276239$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Miao, Yule</creatorcontrib><creatorcontrib>Duan, Wenyi</creatorcontrib><creatorcontrib>Li, Ang</creatorcontrib><creatorcontrib>Yuan, Mingzhu</creatorcontrib><creatorcontrib>Meng, Junren</creatorcontrib><creatorcontrib>Wang, Hongmei</creatorcontrib><creatorcontrib>Pan, Lei</creatorcontrib><creatorcontrib>Sun, Shihang</creatorcontrib><creatorcontrib>Cui, Guochao</creatorcontrib><creatorcontrib>Shi, Caiyun</creatorcontrib><creatorcontrib>Niu, Liang</creatorcontrib><creatorcontrib>Zeng, Wenfang</creatorcontrib><title>The MYB transcription factor PpMYB5 regulates Pp4CL1/Pp4CL2 expression to promote lignin biosynthesis of fruit russeting in the flat nectarine</title><title>Plant cell reports</title><addtitle>Plant Cell Rep</addtitle><addtitle>Plant Cell Rep</addtitle><description>Key message
Transcription factor PpMYB5 promotes lignin synthesis by directly binding to the
Pp4CL1/Pp4CL2
promoter and affecting their expression, which may be related to nectarine russeting formation.
Nectarine russeting is usually considered to be a non-invasive physiological disease that usually occurs on late-maturing cultivars and seriously affects their appearance quality and commercial value. The cause of nectarine fruit rust is currently unknown. In this study, we compared two flat nectarine cultivars, ‘zhongyoupanweidi’ (HD; russeting-free cultivar) and ‘zhongyoupanweihou’ (TH; russeting-prone cultivar), with respect to nectarine russeting by means of microscopy, transcriptomics, and hormone analysis. Compared to HD fruits, TH fruits had a broken cuticle, missing wax layer, and heavy lignin deposition. RNA sequencing (RNA-seq) revealed significant alternations in the expression of genes related to lignin synthesis. Moreover, structure genes
Pp4CL1
and
Pp4CL2
, MYB transcription factor (TF) gene
PpMYB5
were identified through weighted gene co-expression network analysis (WGCNA). Molecular experiments and transgenic evidence suggested that PpMYB5 regulates
Pp4CL1
/
Pp4CL2
expression to promote lignin synthesis. Overall, in addition to providing new insights into the formation of mechanisms for nectarine russeting, our study also establishes a foundation for nectarine russeting prevention.</description><subject>Alternations</subject><subject>Biomedical and Life Sciences</subject><subject>Biosynthesis</subject><subject>Biotechnology</subject><subject>Cell Biology</subject><subject>Chemical synthesis</subject><subject>Cultivars</subject><subject>Fruit - genetics</subject><subject>Fruit - metabolism</subject><subject>Fruits</subject><subject>Gene expression</subject><subject>Gene Expression Regulation, Plant</subject><subject>Gene sequencing</subject><subject>Genes</subject><subject>genetically modified organisms</subject><subject>Life Sciences</subject><subject>Lignin</subject><subject>Lignin - biosynthesis</subject><subject>Lignin - metabolism</subject><subject>microscopy</subject><subject>nectarines</subject><subject>Network analysis</subject><subject>Original Article</subject><subject>Physiological effects</subject><subject>Plant Biochemistry</subject><subject>Plant cuticle</subject><subject>Plant Diseases - genetics</subject><subject>Plant Diseases - microbiology</subject><subject>Plant Proteins - genetics</subject><subject>Plant Proteins - metabolism</subject><subject>Plant Sciences</subject><subject>Plants, Genetically Modified</subject><subject>Promoter Regions, Genetic - genetics</subject><subject>Prunus persica nucipersica</subject><subject>Ribonucleic acid</subject><subject>RNA</subject><subject>Rust fungi</subject><subject>sequence analysis</subject><subject>Transcription</subject><subject>Transcription factors</subject><subject>Transcription Factors - genetics</subject><subject>Transcription Factors - metabolism</subject><subject>Transcriptomics</subject><issn>0721-7714</issn><issn>1432-203X</issn><issn>1432-203X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkUuLFDEUhYMoTjv6B1xIwI2bcm4e9chSm_EBLboYQVdFVeqmJ0N10uamwPkT_mbT3aOCC3F14Z7vnNxwGHsq4KUAaC8IQBpTgdQVKCVFZe6xldBKVhLUl_tsBW1Ztq3QZ-wR0Q1AEdvmITtTRraNVGbFflxdI__w9TXPaQhkk99nHwN3g80x8U_7ItU84XaZh4xUFnq9ERfHITl-3yckOhhy5PsUdzEjn_02-MBHH-k25GskTzw67tLiM08LEWYftrwgReSuBPOANg_JB3zMHrhhJnxyN8_Z5zeXV-t31ebj2_frV5vKys7kShs9NRolYGu0Uk7brtMSQE1WAQwazNg4N6m2qzvdGKPATm5sTF0PdqrNqM7Zi1NuOfrbgpT7nSeL8zwEjAv1StSqrU1Xw3-goDthdNcV9Plf6E1cUigfOVKNaBptCiVPlE2RKKHr98nvhnTbC-gPxfanYvtSbH8stj-Ynt1FL-MOp9-WX00WQJ0AKlLYYvrz9j9ifwI9ta1-</recordid><startdate>20241001</startdate><enddate>20241001</enddate><creator>Miao, Yule</creator><creator>Duan, Wenyi</creator><creator>Li, Ang</creator><creator>Yuan, Mingzhu</creator><creator>Meng, Junren</creator><creator>Wang, Hongmei</creator><creator>Pan, Lei</creator><creator>Sun, Shihang</creator><creator>Cui, Guochao</creator><creator>Shi, Caiyun</creator><creator>Niu, Liang</creator><creator>Zeng, Wenfang</creator><general>Springer Berlin Heidelberg</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7T5</scope><scope>7T7</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>K9.</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>7S9</scope><scope>L.6</scope><orcidid>https://orcid.org/0000-0002-7792-4725</orcidid><orcidid>https://orcid.org/0000-0001-6232-4877</orcidid></search><sort><creationdate>20241001</creationdate><title>The MYB transcription factor PpMYB5 regulates Pp4CL1/Pp4CL2 expression to promote lignin biosynthesis of fruit russeting in the flat nectarine</title><author>Miao, Yule ; Duan, Wenyi ; Li, Ang ; Yuan, Mingzhu ; Meng, Junren ; Wang, Hongmei ; Pan, Lei ; Sun, Shihang ; Cui, Guochao ; Shi, Caiyun ; Niu, Liang ; Zeng, Wenfang</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c289t-494d64e20e79433f4c8842003dc300a409b6ffd37858469930cdfb6955acd59b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Alternations</topic><topic>Biomedical and Life Sciences</topic><topic>Biosynthesis</topic><topic>Biotechnology</topic><topic>Cell Biology</topic><topic>Chemical synthesis</topic><topic>Cultivars</topic><topic>Fruit - genetics</topic><topic>Fruit - metabolism</topic><topic>Fruits</topic><topic>Gene expression</topic><topic>Gene Expression Regulation, Plant</topic><topic>Gene sequencing</topic><topic>Genes</topic><topic>genetically modified organisms</topic><topic>Life Sciences</topic><topic>Lignin</topic><topic>Lignin - biosynthesis</topic><topic>Lignin - metabolism</topic><topic>microscopy</topic><topic>nectarines</topic><topic>Network analysis</topic><topic>Original Article</topic><topic>Physiological effects</topic><topic>Plant Biochemistry</topic><topic>Plant cuticle</topic><topic>Plant Diseases - genetics</topic><topic>Plant Diseases - microbiology</topic><topic>Plant Proteins - genetics</topic><topic>Plant Proteins - metabolism</topic><topic>Plant Sciences</topic><topic>Plants, Genetically Modified</topic><topic>Promoter Regions, Genetic - genetics</topic><topic>Prunus persica nucipersica</topic><topic>Ribonucleic acid</topic><topic>RNA</topic><topic>Rust fungi</topic><topic>sequence analysis</topic><topic>Transcription</topic><topic>Transcription factors</topic><topic>Transcription Factors - genetics</topic><topic>Transcription Factors - metabolism</topic><topic>Transcriptomics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Miao, Yule</creatorcontrib><creatorcontrib>Duan, Wenyi</creatorcontrib><creatorcontrib>Li, Ang</creatorcontrib><creatorcontrib>Yuan, Mingzhu</creatorcontrib><creatorcontrib>Meng, Junren</creatorcontrib><creatorcontrib>Wang, Hongmei</creatorcontrib><creatorcontrib>Pan, Lei</creatorcontrib><creatorcontrib>Sun, Shihang</creatorcontrib><creatorcontrib>Cui, Guochao</creatorcontrib><creatorcontrib>Shi, Caiyun</creatorcontrib><creatorcontrib>Niu, Liang</creatorcontrib><creatorcontrib>Zeng, Wenfang</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Immunology Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><jtitle>Plant cell reports</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Miao, Yule</au><au>Duan, Wenyi</au><au>Li, Ang</au><au>Yuan, Mingzhu</au><au>Meng, Junren</au><au>Wang, Hongmei</au><au>Pan, Lei</au><au>Sun, Shihang</au><au>Cui, Guochao</au><au>Shi, Caiyun</au><au>Niu, Liang</au><au>Zeng, Wenfang</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The MYB transcription factor PpMYB5 regulates Pp4CL1/Pp4CL2 expression to promote lignin biosynthesis of fruit russeting in the flat nectarine</atitle><jtitle>Plant cell reports</jtitle><stitle>Plant Cell Rep</stitle><addtitle>Plant Cell Rep</addtitle><date>2024-10-01</date><risdate>2024</risdate><volume>43</volume><issue>10</issue><spage>231</spage><epage>231</epage><pages>231-231</pages><artnum>231</artnum><issn>0721-7714</issn><issn>1432-203X</issn><eissn>1432-203X</eissn><abstract>Key message
Transcription factor PpMYB5 promotes lignin synthesis by directly binding to the
Pp4CL1/Pp4CL2
promoter and affecting their expression, which may be related to nectarine russeting formation.
Nectarine russeting is usually considered to be a non-invasive physiological disease that usually occurs on late-maturing cultivars and seriously affects their appearance quality and commercial value. The cause of nectarine fruit rust is currently unknown. In this study, we compared two flat nectarine cultivars, ‘zhongyoupanweidi’ (HD; russeting-free cultivar) and ‘zhongyoupanweihou’ (TH; russeting-prone cultivar), with respect to nectarine russeting by means of microscopy, transcriptomics, and hormone analysis. Compared to HD fruits, TH fruits had a broken cuticle, missing wax layer, and heavy lignin deposition. RNA sequencing (RNA-seq) revealed significant alternations in the expression of genes related to lignin synthesis. Moreover, structure genes
Pp4CL1
and
Pp4CL2
, MYB transcription factor (TF) gene
PpMYB5
were identified through weighted gene co-expression network analysis (WGCNA). Molecular experiments and transgenic evidence suggested that PpMYB5 regulates
Pp4CL1
/
Pp4CL2
expression to promote lignin synthesis. Overall, in addition to providing new insights into the formation of mechanisms for nectarine russeting, our study also establishes a foundation for nectarine russeting prevention.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>39276239</pmid><doi>10.1007/s00299-024-03321-9</doi><tpages>1</tpages><orcidid>https://orcid.org/0000-0002-7792-4725</orcidid><orcidid>https://orcid.org/0000-0001-6232-4877</orcidid></addata></record> |
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| ispartof | Plant cell reports, 2024-10, Vol.43 (10), p.231-231, Article 231 |
| issn | 0721-7714 1432-203X 1432-203X |
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| source | MEDLINE; Springer Nature - Complete Springer Journals |
| subjects | Alternations Biomedical and Life Sciences Biosynthesis Biotechnology Cell Biology Chemical synthesis Cultivars Fruit - genetics Fruit - metabolism Fruits Gene expression Gene Expression Regulation, Plant Gene sequencing Genes genetically modified organisms Life Sciences Lignin Lignin - biosynthesis Lignin - metabolism microscopy nectarines Network analysis Original Article Physiological effects Plant Biochemistry Plant cuticle Plant Diseases - genetics Plant Diseases - microbiology Plant Proteins - genetics Plant Proteins - metabolism Plant Sciences Plants, Genetically Modified Promoter Regions, Genetic - genetics Prunus persica nucipersica Ribonucleic acid RNA Rust fungi sequence analysis Transcription Transcription factors Transcription Factors - genetics Transcription Factors - metabolism Transcriptomics |
| title | The MYB transcription factor PpMYB5 regulates Pp4CL1/Pp4CL2 expression to promote lignin biosynthesis of fruit russeting in the flat nectarine |
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