Risk Variants Associated With Normal Pressure Hydrocephalus: Genome-Wide Association Study in the FinnGen Cohort

Large-scale genome-wide studies of chronic hydrocephalus have been lacking. We conducted a genome-wide association study (GWAS) in normal pressure hydrocephalus (NPH). We used a case-control study design implementing FinnGen data containing 473,691 Finns with genotypes and nationwide health records....

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Veröffentlicht in:Neurology 2024-09, Vol.103 (5), p.e209694
Hauptverfasser: Räsänen, Joel, Heikkinen, Sami, Mäklin, Kiira, Lipponen, Anssi, Kuulasmaa, Teemu, Mehtonen, Juha, Korhonen, Ville E, Junkkari, Antti, Grenier-Boley, Benjamin, Bellenguez, Celine, Oinas, Minna, Avellan, Cecilia, Frantzén, Janek, Kotkansalo, Anna, Rinne, Jaakko, Ronkainen, Antti, Kauppinen, Mikko, von Und Zu Fraunberg, Mikael, Lönnrot, Kimmo, Satopää, Jarno, Perola, Markus, Koivisto, Anne M, Julkunen, Valtteri, Portaankorva, Anne M, Mannermaa, Arto, Soininen, Hilkka, Helisalmi, Seppo, Jääskeläinen, Juha E, Lambert, Jean-Charles, Eide, Per K, Palotie, Aarno, Kurki, Mitja I, Hiltunen, Mikko, Leinonen, Ville
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container_end_page
container_issue 5
container_start_page e209694
container_title Neurology
container_volume 103
creator Räsänen, Joel
Heikkinen, Sami
Mäklin, Kiira
Lipponen, Anssi
Kuulasmaa, Teemu
Mehtonen, Juha
Korhonen, Ville E
Junkkari, Antti
Grenier-Boley, Benjamin
Bellenguez, Celine
Oinas, Minna
Avellan, Cecilia
Frantzén, Janek
Kotkansalo, Anna
Rinne, Jaakko
Ronkainen, Antti
Kauppinen, Mikko
von Und Zu Fraunberg, Mikael
Lönnrot, Kimmo
Satopää, Jarno
Perola, Markus
Koivisto, Anne M
Julkunen, Valtteri
Portaankorva, Anne M
Mannermaa, Arto
Soininen, Hilkka
Helisalmi, Seppo
Jääskeläinen, Juha E
Lambert, Jean-Charles
Eide, Per K
Palotie, Aarno
Kurki, Mitja I
Hiltunen, Mikko
Leinonen, Ville
description Large-scale genome-wide studies of chronic hydrocephalus have been lacking. We conducted a genome-wide association study (GWAS) in normal pressure hydrocephalus (NPH). We used a case-control study design implementing FinnGen data containing 473,691 Finns with genotypes and nationwide health records. Patients with NPH were selected based on G91.2 diagnosis. To select patients with idiopathic NPH (iNPH) for sensitivity analysis, we excluded patients with a potentially known etiology of the condition using an algorithm on their disease history. The controls were the remaining non-hydrocephalic participants. For a replication analysis, the NPH cohort from UK Biobank (UKBB) was used. We included 1,522 patients with NPH (mean age 72.2 years, 53% women) and 451,091 controls (mean age 60.5 years, 44% women). In the GWAS comparing patients with NPH with the controls, we identified 6 gene regions significantly ( < 5.0e-8) associated with NPH that replicated in a meta-analysis with UKBB (NPH n = 173). The top loci near the following genes were rs7962263, (odds ratio [OR] 0.71, 95% CI 0.65-0.78, = 1.0e-14); rs798495, / (OR 1.29, 95% CI 1.20-1.39, = 2.9e-12); rs10828247, (OR 0.77, 95% CI 0.71-0.83, = 1.5e-11); rs561699566 and rs371919113, (OR 0.76, 95% CI 0.70-0.82, = 1.5e-11); rs56023709, (OR 1.24, 95% CI 1.16-1.33, = 3.0e-9); and rs62434144, (OR 1.23, 95% CI 1.14-1.32, = 1.4e-8). In the sensitivity analysis comparing only patients with iNPH (n = 1,055) with the controls (n = 451,091), 4 top loci near the following genes remained significant: rs7962263, (OR 0.70, 95% CI 0.63-0.78, = 2.1e-11); rs10828247, (OR 0.74, 95% CI 0.62-0.82, = 4.6e-10); rs798511, / (OR 1.28, 95% CI 1.17-1.39, = 1.7e-8); and rs56023709, (OR 1.28, 95% CI 1.17-1.39, = 1.7e-8). We identified 6 loci significantly associated with NPH in the thus far largest GWAS in chronic hydrocephalus. The genes near the top loci have previously been associated with blood-brain barrier and blood-CSF barrier function and with increased lateral brain ventricle volume. The effect sizes and allele frequencies remained similar in NPH and iNPH cohorts, indicating the identified loci are risk determinants for iNPH and likely not explained by associations with other etiologies. However, the exact role of these loci is still unknown, warranting further studies.
doi_str_mv 10.1212/WNL.0000000000209694
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We conducted a genome-wide association study (GWAS) in normal pressure hydrocephalus (NPH). We used a case-control study design implementing FinnGen data containing 473,691 Finns with genotypes and nationwide health records. Patients with NPH were selected based on G91.2 diagnosis. To select patients with idiopathic NPH (iNPH) for sensitivity analysis, we excluded patients with a potentially known etiology of the condition using an algorithm on their disease history. The controls were the remaining non-hydrocephalic participants. For a replication analysis, the NPH cohort from UK Biobank (UKBB) was used. We included 1,522 patients with NPH (mean age 72.2 years, 53% women) and 451,091 controls (mean age 60.5 years, 44% women). In the GWAS comparing patients with NPH with the controls, we identified 6 gene regions significantly ( &lt; 5.0e-8) associated with NPH that replicated in a meta-analysis with UKBB (NPH n = 173). The top loci near the following genes were rs7962263, (odds ratio [OR] 0.71, 95% CI 0.65-0.78, = 1.0e-14); rs798495, / (OR 1.29, 95% CI 1.20-1.39, = 2.9e-12); rs10828247, (OR 0.77, 95% CI 0.71-0.83, = 1.5e-11); rs561699566 and rs371919113, (OR 0.76, 95% CI 0.70-0.82, = 1.5e-11); rs56023709, (OR 1.24, 95% CI 1.16-1.33, = 3.0e-9); and rs62434144, (OR 1.23, 95% CI 1.14-1.32, = 1.4e-8). In the sensitivity analysis comparing only patients with iNPH (n = 1,055) with the controls (n = 451,091), 4 top loci near the following genes remained significant: rs7962263, (OR 0.70, 95% CI 0.63-0.78, = 2.1e-11); rs10828247, (OR 0.74, 95% CI 0.62-0.82, = 4.6e-10); rs798511, / (OR 1.28, 95% CI 1.17-1.39, = 1.7e-8); and rs56023709, (OR 1.28, 95% CI 1.17-1.39, = 1.7e-8). We identified 6 loci significantly associated with NPH in the thus far largest GWAS in chronic hydrocephalus. The genes near the top loci have previously been associated with blood-brain barrier and blood-CSF barrier function and with increased lateral brain ventricle volume. The effect sizes and allele frequencies remained similar in NPH and iNPH cohorts, indicating the identified loci are risk determinants for iNPH and likely not explained by associations with other etiologies. 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We conducted a genome-wide association study (GWAS) in normal pressure hydrocephalus (NPH). We used a case-control study design implementing FinnGen data containing 473,691 Finns with genotypes and nationwide health records. Patients with NPH were selected based on G91.2 diagnosis. To select patients with idiopathic NPH (iNPH) for sensitivity analysis, we excluded patients with a potentially known etiology of the condition using an algorithm on their disease history. The controls were the remaining non-hydrocephalic participants. For a replication analysis, the NPH cohort from UK Biobank (UKBB) was used. We included 1,522 patients with NPH (mean age 72.2 years, 53% women) and 451,091 controls (mean age 60.5 years, 44% women). In the GWAS comparing patients with NPH with the controls, we identified 6 gene regions significantly ( &lt; 5.0e-8) associated with NPH that replicated in a meta-analysis with UKBB (NPH n = 173). The top loci near the following genes were rs7962263, (odds ratio [OR] 0.71, 95% CI 0.65-0.78, = 1.0e-14); rs798495, / (OR 1.29, 95% CI 1.20-1.39, = 2.9e-12); rs10828247, (OR 0.77, 95% CI 0.71-0.83, = 1.5e-11); rs561699566 and rs371919113, (OR 0.76, 95% CI 0.70-0.82, = 1.5e-11); rs56023709, (OR 1.24, 95% CI 1.16-1.33, = 3.0e-9); and rs62434144, (OR 1.23, 95% CI 1.14-1.32, = 1.4e-8). In the sensitivity analysis comparing only patients with iNPH (n = 1,055) with the controls (n = 451,091), 4 top loci near the following genes remained significant: rs7962263, (OR 0.70, 95% CI 0.63-0.78, = 2.1e-11); rs10828247, (OR 0.74, 95% CI 0.62-0.82, = 4.6e-10); rs798511, / (OR 1.28, 95% CI 1.17-1.39, = 1.7e-8); and rs56023709, (OR 1.28, 95% CI 1.17-1.39, = 1.7e-8). We identified 6 loci significantly associated with NPH in the thus far largest GWAS in chronic hydrocephalus. The genes near the top loci have previously been associated with blood-brain barrier and blood-CSF barrier function and with increased lateral brain ventricle volume. The effect sizes and allele frequencies remained similar in NPH and iNPH cohorts, indicating the identified loci are risk determinants for iNPH and likely not explained by associations with other etiologies. However, the exact role of these loci is still unknown, warranting further studies.</description><subject>Aged</subject><subject>Aged, 80 and over</subject><subject>Case-Control Studies</subject><subject>Cohort Studies</subject><subject>Female</subject><subject>Finland</subject><subject>Genetic Predisposition to Disease - genetics</subject><subject>Genome-Wide Association Study</subject><subject>Humans</subject><subject>Hydrocephalus, Normal Pressure - genetics</subject><subject>Male</subject><subject>Middle Aged</subject><subject>Polymorphism, Single Nucleotide</subject><issn>0028-3878</issn><issn>1526-632X</issn><issn>1526-632X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpdkMtOwzAQRS0EoqXwBwh5ySbFj9SO2aGKtkhVQbzKLnKSqWJI4mA7i_49QS1dMJuRZu6dqzkIXVIypoyym_VqOSaHYkQJFR-hIZ0wEQnOPo7RsB8nEU9kMkBn3n8S0i-lOkUDrmhME8WGqH02_gu_a2d0Ezy-897mRgco8NqEEq-sq3WFnxx43znAi23hbA5tqavO3-I5NLaGaG0KOFiNbfBL6IotNg0OJeCZaZpeiKe2tC6co5ONrjxc7PsIvc3uX6eLaPk4f5jeLaOcJiJEUkCyIVqwIoaY6iwTE81yrYH3r3IAJWKipKS5FHnCYsVUJpWkwJJJpiFmfISud3dbZ7878CGtjc-hqnQDtvMpJ4pTSYmQvTTeSXNnvXewSVtnau22KSXpL-u0Z53-Z93brvYJXVZDcTD9weU_Qb16Wg</recordid><startdate>20240910</startdate><enddate>20240910</enddate><creator>Räsänen, Joel</creator><creator>Heikkinen, Sami</creator><creator>Mäklin, Kiira</creator><creator>Lipponen, Anssi</creator><creator>Kuulasmaa, Teemu</creator><creator>Mehtonen, Juha</creator><creator>Korhonen, Ville E</creator><creator>Junkkari, Antti</creator><creator>Grenier-Boley, Benjamin</creator><creator>Bellenguez, Celine</creator><creator>Oinas, Minna</creator><creator>Avellan, Cecilia</creator><creator>Frantzén, Janek</creator><creator>Kotkansalo, Anna</creator><creator>Rinne, Jaakko</creator><creator>Ronkainen, Antti</creator><creator>Kauppinen, Mikko</creator><creator>von Und Zu Fraunberg, Mikael</creator><creator>Lönnrot, Kimmo</creator><creator>Satopää, Jarno</creator><creator>Perola, Markus</creator><creator>Koivisto, Anne M</creator><creator>Julkunen, Valtteri</creator><creator>Portaankorva, Anne M</creator><creator>Mannermaa, Arto</creator><creator>Soininen, Hilkka</creator><creator>Helisalmi, Seppo</creator><creator>Jääskeläinen, Juha E</creator><creator>Lambert, Jean-Charles</creator><creator>Eide, Per K</creator><creator>Palotie, Aarno</creator><creator>Kurki, Mitja I</creator><creator>Hiltunen, Mikko</creator><creator>Leinonen, Ville</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0003-0829-7817</orcidid><orcidid>https://orcid.org/0000-0002-4969-5101</orcidid><orcidid>https://orcid.org/0009-0008-8244-2270</orcidid><orcidid>https://orcid.org/0000-0002-6083-2402</orcidid><orcidid>https://orcid.org/0000-0002-4282-4687</orcidid><orcidid>https://orcid.org/0000-0002-2674-0301</orcidid><orcidid>https://orcid.org/0000-0001-6881-9280</orcidid></search><sort><creationdate>20240910</creationdate><title>Risk Variants Associated With Normal Pressure Hydrocephalus: Genome-Wide Association Study in the FinnGen Cohort</title><author>Räsänen, Joel ; Heikkinen, Sami ; Mäklin, Kiira ; Lipponen, Anssi ; Kuulasmaa, Teemu ; Mehtonen, Juha ; Korhonen, Ville E ; Junkkari, Antti ; Grenier-Boley, Benjamin ; Bellenguez, Celine ; Oinas, Minna ; Avellan, Cecilia ; Frantzén, Janek ; Kotkansalo, Anna ; Rinne, Jaakko ; Ronkainen, Antti ; Kauppinen, Mikko ; von Und Zu Fraunberg, Mikael ; Lönnrot, Kimmo ; Satopää, Jarno ; Perola, Markus ; Koivisto, Anne M ; Julkunen, Valtteri ; Portaankorva, Anne M ; Mannermaa, Arto ; Soininen, Hilkka ; Helisalmi, Seppo ; Jääskeläinen, Juha E ; Lambert, Jean-Charles ; Eide, Per K ; Palotie, Aarno ; Kurki, Mitja I ; Hiltunen, Mikko ; Leinonen, Ville</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c186t-76e8f0a62d4e41abb65a2caae30203ee96409771c76c824929b7971e285bae423</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Aged</topic><topic>Aged, 80 and over</topic><topic>Case-Control Studies</topic><topic>Cohort Studies</topic><topic>Female</topic><topic>Finland</topic><topic>Genetic Predisposition to Disease - genetics</topic><topic>Genome-Wide Association Study</topic><topic>Humans</topic><topic>Hydrocephalus, Normal Pressure - genetics</topic><topic>Male</topic><topic>Middle Aged</topic><topic>Polymorphism, Single Nucleotide</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Räsänen, Joel</creatorcontrib><creatorcontrib>Heikkinen, Sami</creatorcontrib><creatorcontrib>Mäklin, Kiira</creatorcontrib><creatorcontrib>Lipponen, Anssi</creatorcontrib><creatorcontrib>Kuulasmaa, Teemu</creatorcontrib><creatorcontrib>Mehtonen, Juha</creatorcontrib><creatorcontrib>Korhonen, Ville E</creatorcontrib><creatorcontrib>Junkkari, Antti</creatorcontrib><creatorcontrib>Grenier-Boley, Benjamin</creatorcontrib><creatorcontrib>Bellenguez, Celine</creatorcontrib><creatorcontrib>Oinas, Minna</creatorcontrib><creatorcontrib>Avellan, Cecilia</creatorcontrib><creatorcontrib>Frantzén, Janek</creatorcontrib><creatorcontrib>Kotkansalo, Anna</creatorcontrib><creatorcontrib>Rinne, Jaakko</creatorcontrib><creatorcontrib>Ronkainen, Antti</creatorcontrib><creatorcontrib>Kauppinen, Mikko</creatorcontrib><creatorcontrib>von Und Zu Fraunberg, Mikael</creatorcontrib><creatorcontrib>Lönnrot, Kimmo</creatorcontrib><creatorcontrib>Satopää, Jarno</creatorcontrib><creatorcontrib>Perola, Markus</creatorcontrib><creatorcontrib>Koivisto, Anne M</creatorcontrib><creatorcontrib>Julkunen, Valtteri</creatorcontrib><creatorcontrib>Portaankorva, Anne M</creatorcontrib><creatorcontrib>Mannermaa, Arto</creatorcontrib><creatorcontrib>Soininen, Hilkka</creatorcontrib><creatorcontrib>Helisalmi, Seppo</creatorcontrib><creatorcontrib>Jääskeläinen, Juha E</creatorcontrib><creatorcontrib>Lambert, Jean-Charles</creatorcontrib><creatorcontrib>Eide, Per K</creatorcontrib><creatorcontrib>Palotie, Aarno</creatorcontrib><creatorcontrib>Kurki, Mitja I</creatorcontrib><creatorcontrib>Hiltunen, Mikko</creatorcontrib><creatorcontrib>Leinonen, Ville</creatorcontrib><creatorcontrib>for FinnGen</creatorcontrib><creatorcontrib>for FinnGen</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Neurology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Räsänen, Joel</au><au>Heikkinen, Sami</au><au>Mäklin, Kiira</au><au>Lipponen, Anssi</au><au>Kuulasmaa, Teemu</au><au>Mehtonen, Juha</au><au>Korhonen, Ville E</au><au>Junkkari, Antti</au><au>Grenier-Boley, Benjamin</au><au>Bellenguez, Celine</au><au>Oinas, Minna</au><au>Avellan, Cecilia</au><au>Frantzén, Janek</au><au>Kotkansalo, Anna</au><au>Rinne, Jaakko</au><au>Ronkainen, Antti</au><au>Kauppinen, Mikko</au><au>von Und Zu Fraunberg, Mikael</au><au>Lönnrot, Kimmo</au><au>Satopää, Jarno</au><au>Perola, Markus</au><au>Koivisto, Anne M</au><au>Julkunen, Valtteri</au><au>Portaankorva, Anne M</au><au>Mannermaa, Arto</au><au>Soininen, Hilkka</au><au>Helisalmi, Seppo</au><au>Jääskeläinen, Juha E</au><au>Lambert, Jean-Charles</au><au>Eide, Per K</au><au>Palotie, Aarno</au><au>Kurki, Mitja I</au><au>Hiltunen, Mikko</au><au>Leinonen, Ville</au><aucorp>for FinnGen</aucorp><aucorp>for FinnGen</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Risk Variants Associated With Normal Pressure Hydrocephalus: Genome-Wide Association Study in the FinnGen Cohort</atitle><jtitle>Neurology</jtitle><addtitle>Neurology</addtitle><date>2024-09-10</date><risdate>2024</risdate><volume>103</volume><issue>5</issue><spage>e209694</spage><pages>e209694-</pages><issn>0028-3878</issn><issn>1526-632X</issn><eissn>1526-632X</eissn><abstract>Large-scale genome-wide studies of chronic hydrocephalus have been lacking. We conducted a genome-wide association study (GWAS) in normal pressure hydrocephalus (NPH). We used a case-control study design implementing FinnGen data containing 473,691 Finns with genotypes and nationwide health records. Patients with NPH were selected based on G91.2 diagnosis. To select patients with idiopathic NPH (iNPH) for sensitivity analysis, we excluded patients with a potentially known etiology of the condition using an algorithm on their disease history. The controls were the remaining non-hydrocephalic participants. For a replication analysis, the NPH cohort from UK Biobank (UKBB) was used. We included 1,522 patients with NPH (mean age 72.2 years, 53% women) and 451,091 controls (mean age 60.5 years, 44% women). In the GWAS comparing patients with NPH with the controls, we identified 6 gene regions significantly ( &lt; 5.0e-8) associated with NPH that replicated in a meta-analysis with UKBB (NPH n = 173). The top loci near the following genes were rs7962263, (odds ratio [OR] 0.71, 95% CI 0.65-0.78, = 1.0e-14); rs798495, / (OR 1.29, 95% CI 1.20-1.39, = 2.9e-12); rs10828247, (OR 0.77, 95% CI 0.71-0.83, = 1.5e-11); rs561699566 and rs371919113, (OR 0.76, 95% CI 0.70-0.82, = 1.5e-11); rs56023709, (OR 1.24, 95% CI 1.16-1.33, = 3.0e-9); and rs62434144, (OR 1.23, 95% CI 1.14-1.32, = 1.4e-8). In the sensitivity analysis comparing only patients with iNPH (n = 1,055) with the controls (n = 451,091), 4 top loci near the following genes remained significant: rs7962263, (OR 0.70, 95% CI 0.63-0.78, = 2.1e-11); rs10828247, (OR 0.74, 95% CI 0.62-0.82, = 4.6e-10); rs798511, / (OR 1.28, 95% CI 1.17-1.39, = 1.7e-8); and rs56023709, (OR 1.28, 95% CI 1.17-1.39, = 1.7e-8). We identified 6 loci significantly associated with NPH in the thus far largest GWAS in chronic hydrocephalus. The genes near the top loci have previously been associated with blood-brain barrier and blood-CSF barrier function and with increased lateral brain ventricle volume. The effect sizes and allele frequencies remained similar in NPH and iNPH cohorts, indicating the identified loci are risk determinants for iNPH and likely not explained by associations with other etiologies. However, the exact role of these loci is still unknown, warranting further studies.</abstract><cop>United States</cop><pmid>39141892</pmid><doi>10.1212/WNL.0000000000209694</doi><orcidid>https://orcid.org/0000-0003-0829-7817</orcidid><orcidid>https://orcid.org/0000-0002-4969-5101</orcidid><orcidid>https://orcid.org/0009-0008-8244-2270</orcidid><orcidid>https://orcid.org/0000-0002-6083-2402</orcidid><orcidid>https://orcid.org/0000-0002-4282-4687</orcidid><orcidid>https://orcid.org/0000-0002-2674-0301</orcidid><orcidid>https://orcid.org/0000-0001-6881-9280</orcidid></addata></record>
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1526-632X
1526-632X
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source MEDLINE; Journals@Ovid Complete - AutoHoldings; Alma/SFX Local Collection
subjects Aged
Aged, 80 and over
Case-Control Studies
Cohort Studies
Female
Finland
Genetic Predisposition to Disease - genetics
Genome-Wide Association Study
Humans
Hydrocephalus, Normal Pressure - genetics
Male
Middle Aged
Polymorphism, Single Nucleotide
title Risk Variants Associated With Normal Pressure Hydrocephalus: Genome-Wide Association Study in the FinnGen Cohort
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