Prevalence of pathogenic or likely pathogenic germline variants in cancer predisposition genes among selected patients with lung adenocarcinoma: The GERMLUNG study

[Display omitted] •A high pathogenic or likely pathogenic germline variants prevalence was identified based on our selection criteria.•Pathogenic or likely pathogenic germline variants were associated with male sex, and a trend to association with somatic actionable genomic alterations. Pathogenic o...

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Veröffentlicht in:Lung cancer (Amsterdam, Netherlands) Netherlands), 2024-08, Vol.194, p.107864, Article 107864
Hauptverfasser: Arrieta, Oscar, Caballé-Pérez, Enrique, Hernández-Pedro, Norma, Romero-Nuñez, Eunice, Lucio-Lozada, José, Castillo-Ruiz, Cesar, Acevedo-Castillo, Karla, María Álvarez-Gómez, Rosa, Molina-Garay, Carolina, Jiménez-Olivares, Marco, Carrillo-Sánchez, Karol, Cristina Mendoza-Caamal, Elvia, Cardona, Andrés F., Remon, Jordi, Alaez-Verson, Carmen
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container_title Lung cancer (Amsterdam, Netherlands)
container_volume 194
creator Arrieta, Oscar
Caballé-Pérez, Enrique
Hernández-Pedro, Norma
Romero-Nuñez, Eunice
Lucio-Lozada, José
Castillo-Ruiz, Cesar
Acevedo-Castillo, Karla
María Álvarez-Gómez, Rosa
Molina-Garay, Carolina
Jiménez-Olivares, Marco
Carrillo-Sánchez, Karol
Cristina Mendoza-Caamal, Elvia
Cardona, Andrés F.
Remon, Jordi
Alaez-Verson, Carmen
description [Display omitted] •A high pathogenic or likely pathogenic germline variants prevalence was identified based on our selection criteria.•Pathogenic or likely pathogenic germline variants were associated with male sex, and a trend to association with somatic actionable genomic alterations. Pathogenic or likely pathogenic germline variants (PGVs) in cancer predisposition genes may play a role in lung cancer (LC) susceptibility. However, determining an eligible population for genetic testing remains uncertain. This study aimed to assess the prevalence of PGVs in a selected cohort of individuals with lung adenocarcinoma. A cross-sectional cohort study was conducted to assess the PGVs rate in lung adenocarcinoma patients with a family history of LC, young-onset presentation, history of never/light smoking, or actionable genomic alterations (AGAs). Sequencing was performed using Sophia Hereditary Cancer Solution panel F, including 144 cancer predisposition genes. Variants classified as pathogenic or likely pathogenic were included for further analysis. Of 201 patients, 43 (21.4 %) exhibited PGVs, among which 64.5 % were DNA damage repair genes, and 86.1 % were clinically actionable. The main PGVs were in ATM (9.3 %), TP53 (6.9 %), BRCA2 (6.9 %), and CHEK2 (6.9 %) genes. PGVs were associated with male sex (adjusted odds ratio [aOR] 2.46, 95 % CI 1.15–5.32, p = 0.021), along with a trend toward association with AGAs (aOR 6.04, 95 % CI 0.77–49.74, p = 0.094). In this study, a high PGVs prevalence was identified based on our selection criteria, which represents an effective strategy to identify candidates for germline genomic testing, potential screening strategies in close relatives, and personalized therapeutic modalities. Our results warrant further exploration in other populations to confirm them
doi_str_mv 10.1016/j.lungcan.2024.107864
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Pathogenic or likely pathogenic germline variants (PGVs) in cancer predisposition genes may play a role in lung cancer (LC) susceptibility. However, determining an eligible population for genetic testing remains uncertain. This study aimed to assess the prevalence of PGVs in a selected cohort of individuals with lung adenocarcinoma. A cross-sectional cohort study was conducted to assess the PGVs rate in lung adenocarcinoma patients with a family history of LC, young-onset presentation, history of never/light smoking, or actionable genomic alterations (AGAs). Sequencing was performed using Sophia Hereditary Cancer Solution panel F, including 144 cancer predisposition genes. Variants classified as pathogenic or likely pathogenic were included for further analysis. Of 201 patients, 43 (21.4 %) exhibited PGVs, among which 64.5 % were DNA damage repair genes, and 86.1 % were clinically actionable. The main PGVs were in ATM (9.3 %), TP53 (6.9 %), BRCA2 (6.9 %), and CHEK2 (6.9 %) genes. PGVs were associated with male sex (adjusted odds ratio [aOR] 2.46, 95 % CI 1.15–5.32, p = 0.021), along with a trend toward association with AGAs (aOR 6.04, 95 % CI 0.77–49.74, p = 0.094). In this study, a high PGVs prevalence was identified based on our selection criteria, which represents an effective strategy to identify candidates for germline genomic testing, potential screening strategies in close relatives, and personalized therapeutic modalities. 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Pathogenic or likely pathogenic germline variants (PGVs) in cancer predisposition genes may play a role in lung cancer (LC) susceptibility. However, determining an eligible population for genetic testing remains uncertain. This study aimed to assess the prevalence of PGVs in a selected cohort of individuals with lung adenocarcinoma. A cross-sectional cohort study was conducted to assess the PGVs rate in lung adenocarcinoma patients with a family history of LC, young-onset presentation, history of never/light smoking, or actionable genomic alterations (AGAs). Sequencing was performed using Sophia Hereditary Cancer Solution panel F, including 144 cancer predisposition genes. Variants classified as pathogenic or likely pathogenic were included for further analysis. Of 201 patients, 43 (21.4 %) exhibited PGVs, among which 64.5 % were DNA damage repair genes, and 86.1 % were clinically actionable. The main PGVs were in ATM (9.3 %), TP53 (6.9 %), BRCA2 (6.9 %), and CHEK2 (6.9 %) genes. PGVs were associated with male sex (adjusted odds ratio [aOR] 2.46, 95 % CI 1.15–5.32, p = 0.021), along with a trend toward association with AGAs (aOR 6.04, 95 % CI 0.77–49.74, p = 0.094). In this study, a high PGVs prevalence was identified based on our selection criteria, which represents an effective strategy to identify candidates for germline genomic testing, potential screening strategies in close relatives, and personalized therapeutic modalities. 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subjects Actionable genomic alterations
Adenocarcinoma of lung
Germline Pathogenic/Likely pathogenic variants
Hereditary
Neoplastic syndromes
title Prevalence of pathogenic or likely pathogenic germline variants in cancer predisposition genes among selected patients with lung adenocarcinoma: The GERMLUNG study
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