Database selection for shotgun metaproteomic of low-diversity dairy microbiomes

The metaproteomics field has recently gained more and more interest as a valuable tool for studying both the taxonomy and function of microbiomes, including those used in food fermentations. One crucial step in the metaproteomics pipeline is selecting a database to obtain high-quality taxonomical an...

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Veröffentlicht in:	International journal of food microbiology 2024-06, Vol.418, p.110706-110706, Article 110706
Hauptverfasser:	da Silva Duarte, Vinícius, de Paula Dias Moreira, Luiza, Skeie, Siv B., Svalestad, Fredrik, Øyaas, Jorun, Porcellato, Davide
Format:	Artikel
Sprache:	eng
Schlagworte:	Bacteria - classification Bacteria - genetics Bacteria - isolation & purification Cheese - microbiology Chromatography, Liquid Dairy products Dairy Products - microbiology Database construction Databases, Protein Metagenomics Metagenomics - methods Metaproteomics Microbiota - genetics Proteomics - methods Tandem Mass Spectrometry
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