Distinguishing EGFR mutation molecular subtypes based on MRI radiomics features of lung adenocarcinoma brain metastases
To explore the feasibility of identifying epidermal growth factor receptor (EGFR) mutation molecular subtypes in primary lesions based on the radiomics features of lung adenocarcinoma brain metastases using magnetic resonance imaging (MRI). We retrospectively analyzed clinical, imaging, and genetic...
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description | To explore the feasibility of identifying epidermal growth factor receptor (EGFR) mutation molecular subtypes in primary lesions based on the radiomics features of lung adenocarcinoma brain metastases using magnetic resonance imaging (MRI).
We retrospectively analyzed clinical, imaging, and genetic testing data of patients with lung adenocarcinoma with EGFR gene mutations who had brain metastases. Three-dimensional radiomics features were extracted from contrast-enhanced T1-weighted images. The volume of interest was delineated and normalized using Z-score, dimensionality reduction was performed using principal component analysis, feature selection using Relief, and radiomics model construction using adaptive boosting as a classifier. Data were randomly divided into training and testing datasets at an 8:2 ratio. Five-fold cross-validation was conducted in the training set to select the optimal radiomics features and establish a predictive model for distinguishing between exon 19 deletion (19Del) and exon 21 L858R point mutation (21L858R), the two most common EGFR gene mutations. The testing set was used for external validation of the models. Model performance was evaluated using receiver operating characteristic curve and decision curve analyses.
Overall, 86 patients with 228 brain metastases were included. Patient age was identified as an independent predictor for distinguishing between 19Del and 21L858R. The area under the curve (AUC) values of the radiomics model in the training and testing datasets were 0.895 (95% confidence interval [CI]: 0.850−0.939) and 0.759 (95% CI: 0.0.614−0.903), respectively. The AUC for diagnosis of all cases using a combined model of age and radiomics was 0.888 (95% CI: 0.846−0.930), slightly higher than that of the radiomics model alone (0.866, 95% CI: 0.820−0.913), but without statistical significance (p=0.1626). In the decision curve analysis, both models demonstrated clinical net benefits.
The radiomics model based on MRI of lung adenocarcinoma brain metastases could distinguish between EGFR 19Del and 21L858R mutations in the primary lesion.
•We constructed a radiomics model for distinguishing EGFR 19Del and 21L858R mutations of lung adenocarcinoma brain metastases.•The nomogram model constructed by combining age and radiomics could better distinguish between the EGFR mutation subtypes in the primary lesion. |
doi_str_mv | 10.1016/j.clineuro.2024.108258 |
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We retrospectively analyzed clinical, imaging, and genetic testing data of patients with lung adenocarcinoma with EGFR gene mutations who had brain metastases. Three-dimensional radiomics features were extracted from contrast-enhanced T1-weighted images. The volume of interest was delineated and normalized using Z-score, dimensionality reduction was performed using principal component analysis, feature selection using Relief, and radiomics model construction using adaptive boosting as a classifier. Data were randomly divided into training and testing datasets at an 8:2 ratio. Five-fold cross-validation was conducted in the training set to select the optimal radiomics features and establish a predictive model for distinguishing between exon 19 deletion (19Del) and exon 21 L858R point mutation (21L858R), the two most common EGFR gene mutations. The testing set was used for external validation of the models. Model performance was evaluated using receiver operating characteristic curve and decision curve analyses.
Overall, 86 patients with 228 brain metastases were included. Patient age was identified as an independent predictor for distinguishing between 19Del and 21L858R. The area under the curve (AUC) values of the radiomics model in the training and testing datasets were 0.895 (95% confidence interval [CI]: 0.850−0.939) and 0.759 (95% CI: 0.0.614−0.903), respectively. The AUC for diagnosis of all cases using a combined model of age and radiomics was 0.888 (95% CI: 0.846−0.930), slightly higher than that of the radiomics model alone (0.866, 95% CI: 0.820−0.913), but without statistical significance (p=0.1626). In the decision curve analysis, both models demonstrated clinical net benefits.
The radiomics model based on MRI of lung adenocarcinoma brain metastases could distinguish between EGFR 19Del and 21L858R mutations in the primary lesion.
•We constructed a radiomics model for distinguishing EGFR 19Del and 21L858R mutations of lung adenocarcinoma brain metastases.•The nomogram model constructed by combining age and radiomics could better distinguish between the EGFR mutation subtypes in the primary lesion.</description><identifier>ISSN: 0303-8467</identifier><identifier>ISSN: 1872-6968</identifier><identifier>EISSN: 1872-6968</identifier><identifier>DOI: 10.1016/j.clineuro.2024.108258</identifier><identifier>PMID: 38552362</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>Accuracy ; Adenocarcinoma ; Adenocarcinoma of Lung - diagnostic imaging ; Adenocarcinoma of Lung - genetics ; Adenocarcinoma of Lung - pathology ; Adult ; Aged ; Biopsy ; Brain cancer ; Brain metastases ; Brain Neoplasms - diagnostic imaging ; Brain Neoplasms - genetics ; Brain Neoplasms - secondary ; EGFR ; Epidermal growth factor receptors ; ErbB Receptors - genetics ; Female ; Gene deletion ; Genetic screening ; Hospitals ; Humans ; Kinases ; Lung adenocarcinoma ; Lung cancer ; Lung Neoplasms - diagnostic imaging ; Lung Neoplasms - genetics ; Lung Neoplasms - pathology ; Lungs ; Magnetic resonance imaging ; Magnetic Resonance Imaging - methods ; Male ; Medical prognosis ; Metastases ; Metastasis ; Middle Aged ; MRI ; Mutation ; Neuroimaging ; Patients ; Point mutation ; Prediction models ; Principal components analysis ; Radiomics ; Regression analysis ; Retrospective Studies ; Tumors</subject><ispartof>Clinical neurology and neurosurgery, 2024-05, Vol.240, p.108258, Article 108258</ispartof><rights>2024 Elsevier B.V.</rights><rights>Copyright © 2024 Elsevier B.V. All rights reserved.</rights><rights>2024. Elsevier B.V.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c343t-c202bead444ba2720683b4c456f1f7a43f74eece2da86789d65b27dc98fc21733</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.proquest.com/docview/3046570636?pq-origsite=primo$$EHTML$$P50$$Gproquest$$H</linktohtml><link.rule.ids>314,780,784,3541,27915,27916,45986,64374,64376,64378,72230</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38552362$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Xu, Jiali</creatorcontrib><creatorcontrib>Yang, Yuqiong</creatorcontrib><creatorcontrib>Gao, Zhizhen</creatorcontrib><creatorcontrib>Song, Tao</creatorcontrib><creatorcontrib>Ma, Yichuan</creatorcontrib><creatorcontrib>Yu, Xiaojun</creatorcontrib><creatorcontrib>Shi, Changzheng</creatorcontrib><title>Distinguishing EGFR mutation molecular subtypes based on MRI radiomics features of lung adenocarcinoma brain metastases</title><title>Clinical neurology and neurosurgery</title><addtitle>Clin Neurol Neurosurg</addtitle><description>To explore the feasibility of identifying epidermal growth factor receptor (EGFR) mutation molecular subtypes in primary lesions based on the radiomics features of lung adenocarcinoma brain metastases using magnetic resonance imaging (MRI).
We retrospectively analyzed clinical, imaging, and genetic testing data of patients with lung adenocarcinoma with EGFR gene mutations who had brain metastases. Three-dimensional radiomics features were extracted from contrast-enhanced T1-weighted images. The volume of interest was delineated and normalized using Z-score, dimensionality reduction was performed using principal component analysis, feature selection using Relief, and radiomics model construction using adaptive boosting as a classifier. Data were randomly divided into training and testing datasets at an 8:2 ratio. Five-fold cross-validation was conducted in the training set to select the optimal radiomics features and establish a predictive model for distinguishing between exon 19 deletion (19Del) and exon 21 L858R point mutation (21L858R), the two most common EGFR gene mutations. The testing set was used for external validation of the models. Model performance was evaluated using receiver operating characteristic curve and decision curve analyses.
Overall, 86 patients with 228 brain metastases were included. Patient age was identified as an independent predictor for distinguishing between 19Del and 21L858R. The area under the curve (AUC) values of the radiomics model in the training and testing datasets were 0.895 (95% confidence interval [CI]: 0.850−0.939) and 0.759 (95% CI: 0.0.614−0.903), respectively. The AUC for diagnosis of all cases using a combined model of age and radiomics was 0.888 (95% CI: 0.846−0.930), slightly higher than that of the radiomics model alone (0.866, 95% CI: 0.820−0.913), but without statistical significance (p=0.1626). In the decision curve analysis, both models demonstrated clinical net benefits.
The radiomics model based on MRI of lung adenocarcinoma brain metastases could distinguish between EGFR 19Del and 21L858R mutations in the primary lesion.
•We constructed a radiomics model for distinguishing EGFR 19Del and 21L858R mutations of lung adenocarcinoma brain metastases.•The nomogram model constructed by combining age and radiomics could better distinguish between the EGFR mutation subtypes in the primary lesion.</description><subject>Accuracy</subject><subject>Adenocarcinoma</subject><subject>Adenocarcinoma of Lung - diagnostic imaging</subject><subject>Adenocarcinoma of Lung - genetics</subject><subject>Adenocarcinoma of Lung - pathology</subject><subject>Adult</subject><subject>Aged</subject><subject>Biopsy</subject><subject>Brain cancer</subject><subject>Brain metastases</subject><subject>Brain Neoplasms - diagnostic imaging</subject><subject>Brain Neoplasms - genetics</subject><subject>Brain Neoplasms - secondary</subject><subject>EGFR</subject><subject>Epidermal growth factor receptors</subject><subject>ErbB Receptors - genetics</subject><subject>Female</subject><subject>Gene deletion</subject><subject>Genetic screening</subject><subject>Hospitals</subject><subject>Humans</subject><subject>Kinases</subject><subject>Lung adenocarcinoma</subject><subject>Lung cancer</subject><subject>Lung Neoplasms - diagnostic imaging</subject><subject>Lung Neoplasms - genetics</subject><subject>Lung Neoplasms - pathology</subject><subject>Lungs</subject><subject>Magnetic resonance imaging</subject><subject>Magnetic Resonance Imaging - methods</subject><subject>Male</subject><subject>Medical prognosis</subject><subject>Metastases</subject><subject>Metastasis</subject><subject>Middle Aged</subject><subject>MRI</subject><subject>Mutation</subject><subject>Neuroimaging</subject><subject>Patients</subject><subject>Point mutation</subject><subject>Prediction models</subject><subject>Principal components analysis</subject><subject>Radiomics</subject><subject>Regression analysis</subject><subject>Retrospective Studies</subject><subject>Tumors</subject><issn>0303-8467</issn><issn>1872-6968</issn><issn>1872-6968</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNqFkdtrHCEUhyW0JJvLvxCEvvRlNo466r615A4phdA8i6NnUpeZceslIf99XDbpQ14CwgHPd35ePoROW7JsSSvO1ks7-hlKDEtKKK-binZqDy1aJWkjVkJ9QQvCCGsUF_IAHaa0JoQwJtQ-OmCq6ygTdIGeL3zKfn4sPv2tBV9eX93jqWSTfZjxFEawZTQRp9Lnlw0k3JsEDtfer_tbHI3zYfI24QFMLrH2w4DHUoOMgzlYE62fw2RwH42veZBNqgvSMfo6mDHByVs9Qg9Xl3_Ob5q739e35z_vGss4y42tj-vBOM55b6ikRCjWc8s7MbSDNJwNkgNYoM4oIdXKia6n0tmVGixtJWNH6PsudxPDvwIp68knC-NoZgglaUYo7SShnajotw_oOpQ419tViotKCbalxI6yMaQUYdCb6CcTX3RL9FaNXut3NXqrRu_U1MHTt_jST-D-j727qMCPHQD1P548RJ2sh9mC8xFs1i74z854Bc3NpIE</recordid><startdate>202405</startdate><enddate>202405</enddate><creator>Xu, Jiali</creator><creator>Yang, Yuqiong</creator><creator>Gao, Zhizhen</creator><creator>Song, Tao</creator><creator>Ma, Yichuan</creator><creator>Yu, Xiaojun</creator><creator>Shi, Changzheng</creator><general>Elsevier B.V</general><general>Elsevier Limited</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7TK</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>88G</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>K9.</scope><scope>M0S</scope><scope>M1P</scope><scope>M2M</scope><scope>M2O</scope><scope>MBDVC</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PSYQQ</scope><scope>Q9U</scope><scope>7X8</scope></search><sort><creationdate>202405</creationdate><title>Distinguishing EGFR mutation molecular subtypes based on MRI radiomics features of lung adenocarcinoma brain metastases</title><author>Xu, Jiali ; Yang, Yuqiong ; Gao, Zhizhen ; Song, Tao ; Ma, Yichuan ; Yu, Xiaojun ; Shi, Changzheng</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c343t-c202bead444ba2720683b4c456f1f7a43f74eece2da86789d65b27dc98fc21733</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Accuracy</topic><topic>Adenocarcinoma</topic><topic>Adenocarcinoma of Lung - diagnostic imaging</topic><topic>Adenocarcinoma of Lung - genetics</topic><topic>Adenocarcinoma of Lung - pathology</topic><topic>Adult</topic><topic>Aged</topic><topic>Biopsy</topic><topic>Brain cancer</topic><topic>Brain metastases</topic><topic>Brain Neoplasms - diagnostic imaging</topic><topic>Brain Neoplasms - genetics</topic><topic>Brain Neoplasms - secondary</topic><topic>EGFR</topic><topic>Epidermal growth factor receptors</topic><topic>ErbB Receptors - genetics</topic><topic>Female</topic><topic>Gene deletion</topic><topic>Genetic screening</topic><topic>Hospitals</topic><topic>Humans</topic><topic>Kinases</topic><topic>Lung adenocarcinoma</topic><topic>Lung cancer</topic><topic>Lung Neoplasms - diagnostic imaging</topic><topic>Lung Neoplasms - genetics</topic><topic>Lung Neoplasms - pathology</topic><topic>Lungs</topic><topic>Magnetic resonance imaging</topic><topic>Magnetic Resonance Imaging - methods</topic><topic>Male</topic><topic>Medical prognosis</topic><topic>Metastases</topic><topic>Metastasis</topic><topic>Middle Aged</topic><topic>MRI</topic><topic>Mutation</topic><topic>Neuroimaging</topic><topic>Patients</topic><topic>Point mutation</topic><topic>Prediction models</topic><topic>Principal components analysis</topic><topic>Radiomics</topic><topic>Regression analysis</topic><topic>Retrospective Studies</topic><topic>Tumors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Xu, Jiali</creatorcontrib><creatorcontrib>Yang, Yuqiong</creatorcontrib><creatorcontrib>Gao, Zhizhen</creatorcontrib><creatorcontrib>Song, Tao</creatorcontrib><creatorcontrib>Ma, Yichuan</creatorcontrib><creatorcontrib>Yu, Xiaojun</creatorcontrib><creatorcontrib>Shi, Changzheng</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Neurosciences Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Psychology Database (Alumni)</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Psychology Database</collection><collection>Research Library</collection><collection>Research Library (Corporate)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest One Psychology</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><jtitle>Clinical neurology and neurosurgery</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Xu, Jiali</au><au>Yang, Yuqiong</au><au>Gao, Zhizhen</au><au>Song, Tao</au><au>Ma, Yichuan</au><au>Yu, Xiaojun</au><au>Shi, Changzheng</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Distinguishing EGFR mutation molecular subtypes based on MRI radiomics features of lung adenocarcinoma brain metastases</atitle><jtitle>Clinical neurology and neurosurgery</jtitle><addtitle>Clin Neurol Neurosurg</addtitle><date>2024-05</date><risdate>2024</risdate><volume>240</volume><spage>108258</spage><pages>108258-</pages><artnum>108258</artnum><issn>0303-8467</issn><issn>1872-6968</issn><eissn>1872-6968</eissn><abstract>To explore the feasibility of identifying epidermal growth factor receptor (EGFR) mutation molecular subtypes in primary lesions based on the radiomics features of lung adenocarcinoma brain metastases using magnetic resonance imaging (MRI).
We retrospectively analyzed clinical, imaging, and genetic testing data of patients with lung adenocarcinoma with EGFR gene mutations who had brain metastases. Three-dimensional radiomics features were extracted from contrast-enhanced T1-weighted images. The volume of interest was delineated and normalized using Z-score, dimensionality reduction was performed using principal component analysis, feature selection using Relief, and radiomics model construction using adaptive boosting as a classifier. Data were randomly divided into training and testing datasets at an 8:2 ratio. Five-fold cross-validation was conducted in the training set to select the optimal radiomics features and establish a predictive model for distinguishing between exon 19 deletion (19Del) and exon 21 L858R point mutation (21L858R), the two most common EGFR gene mutations. The testing set was used for external validation of the models. Model performance was evaluated using receiver operating characteristic curve and decision curve analyses.
Overall, 86 patients with 228 brain metastases were included. Patient age was identified as an independent predictor for distinguishing between 19Del and 21L858R. The area under the curve (AUC) values of the radiomics model in the training and testing datasets were 0.895 (95% confidence interval [CI]: 0.850−0.939) and 0.759 (95% CI: 0.0.614−0.903), respectively. The AUC for diagnosis of all cases using a combined model of age and radiomics was 0.888 (95% CI: 0.846−0.930), slightly higher than that of the radiomics model alone (0.866, 95% CI: 0.820−0.913), but without statistical significance (p=0.1626). In the decision curve analysis, both models demonstrated clinical net benefits.
The radiomics model based on MRI of lung adenocarcinoma brain metastases could distinguish between EGFR 19Del and 21L858R mutations in the primary lesion.
•We constructed a radiomics model for distinguishing EGFR 19Del and 21L858R mutations of lung adenocarcinoma brain metastases.•The nomogram model constructed by combining age and radiomics could better distinguish between the EGFR mutation subtypes in the primary lesion.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>38552362</pmid><doi>10.1016/j.clineuro.2024.108258</doi></addata></record> |
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subjects | Accuracy Adenocarcinoma Adenocarcinoma of Lung - diagnostic imaging Adenocarcinoma of Lung - genetics Adenocarcinoma of Lung - pathology Adult Aged Biopsy Brain cancer Brain metastases Brain Neoplasms - diagnostic imaging Brain Neoplasms - genetics Brain Neoplasms - secondary EGFR Epidermal growth factor receptors ErbB Receptors - genetics Female Gene deletion Genetic screening Hospitals Humans Kinases Lung adenocarcinoma Lung cancer Lung Neoplasms - diagnostic imaging Lung Neoplasms - genetics Lung Neoplasms - pathology Lungs Magnetic resonance imaging Magnetic Resonance Imaging - methods Male Medical prognosis Metastases Metastasis Middle Aged MRI Mutation Neuroimaging Patients Point mutation Prediction models Principal components analysis Radiomics Regression analysis Retrospective Studies Tumors |
title | Distinguishing EGFR mutation molecular subtypes based on MRI radiomics features of lung adenocarcinoma brain metastases |
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