Anaerobic Ammonium-Oxidizing (Anammox) Bacteria and Associated Activity in Fixed-Film Biofilters of a Marine Recirculating Aquaculture System

Microbial communities in the biological filter and waste sludge compartments of a marine recirculating aquaculture system were examined to determine the presence and activity of anaerobic ammonium-oxidizing (anammox) bacteria. Community DNA was extracted from aerobic and anaerobic fixed-film biofilt...

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Veröffentlicht in:Applied and Environmental Microbiology 2006-04, Vol.72 (4), p.2896-2904
Hauptverfasser: Tal, Yossi, Watts, Joy E. M, Schreier, Harold J
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Watts, Joy E. M
Schreier, Harold J
description Microbial communities in the biological filter and waste sludge compartments of a marine recirculating aquaculture system were examined to determine the presence and activity of anaerobic ammonium-oxidizing (anammox) bacteria. Community DNA was extracted from aerobic and anaerobic fixed-film biofilters and the anaerobic sludge waste collection tank and was analyzed by amplifying 16S rRNA genes by PCR using anammox-selective and universal GC-clamped primers. Separation of amplified PCR products by denaturing gradient gel electrophoresis and sequencing of the different phylotypes revealed a diverse biofilter microbial community. While Planctomycetales were found in all three communities, the anaerobic denitrifying biofilters contained one clone that exhibited high levels of sequence similarity to known anammox bacteria. Fluorescence in situ hybridization studies using an anammox-specific probe confirmed the presence of anammox Planctomycetales in the microbial biofilm from the denitrifying biofilters, and anammox activity was observed in these biofilters, as detected by the ability to simultaneously consume ammonia and nitrite. To our knowledge, this is the first identification of anammox-related sequences in a marine recirculating aquaculture filtration system, and our findings provide a foundation for incorporating this important pathway for complete nitrogen removal in such systems.
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M</creatorcontrib><creatorcontrib>Schreier, Harold J</creatorcontrib><title>Anaerobic Ammonium-Oxidizing (Anammox) Bacteria and Associated Activity in Fixed-Film Biofilters of a Marine Recirculating Aquaculture System</title><title>Applied and Environmental Microbiology</title><addtitle>Appl Environ Microbiol</addtitle><description>Microbial communities in the biological filter and waste sludge compartments of a marine recirculating aquaculture system were examined to determine the presence and activity of anaerobic ammonium-oxidizing (anammox) bacteria. Community DNA was extracted from aerobic and anaerobic fixed-film biofilters and the anaerobic sludge waste collection tank and was analyzed by amplifying 16S rRNA genes by PCR using anammox-selective and universal GC-clamped primers. Separation of amplified PCR products by denaturing gradient gel electrophoresis and sequencing of the different phylotypes revealed a diverse biofilter microbial community. 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M</au><au>Schreier, Harold J</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Anaerobic Ammonium-Oxidizing (Anammox) Bacteria and Associated Activity in Fixed-Film Biofilters of a Marine Recirculating Aquaculture System</atitle><jtitle>Applied and Environmental Microbiology</jtitle><addtitle>Appl Environ Microbiol</addtitle><date>2006-04-01</date><risdate>2006</risdate><volume>72</volume><issue>4</issue><spage>2896</spage><epage>2904</epage><pages>2896-2904</pages><issn>0099-2240</issn><eissn>1098-5336</eissn><coden>AEMIDF</coden><abstract>Microbial communities in the biological filter and waste sludge compartments of a marine recirculating aquaculture system were examined to determine the presence and activity of anaerobic ammonium-oxidizing (anammox) bacteria. 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subjects Ammonia
Ammonia - metabolism
anaerobes
Aquaculture
Bacteria
Bacteria, Anaerobic - classification
Bacteria, Anaerobic - genetics
Bacteria, Anaerobic - metabolism
Biofilms - growth & development
biofilters
Biological and medical sciences
biological treatment
Biotechnology
Deoxyribonucleic acid
DNA
DNA, Ribosomal - analysis
Filtration - methods
fish culture
fixed-film biofilters
Fundamental and applied biological sciences. Psychology
genes
In Situ Hybridization, Fluorescence
mariculture
Marine
Microbial Ecology
Microbiology
Molecular Sequence Data
Nitrates - metabolism
Nitrosomonadaceae
nucleotide sequences
Organic waste treatment
Oxidation
Oxidation-Reduction
Planctomycetales
Polymorphism, Restriction Fragment Length
recirculating aquaculture systems
ribosomal RNA
RNA, Ribosomal, 16S - genetics
Seawater - microbiology
Sequence Analysis, DNA
wastewater treatment
title Anaerobic Ammonium-Oxidizing (Anammox) Bacteria and Associated Activity in Fixed-Film Biofilters of a Marine Recirculating Aquaculture System
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