Proximity ligation initiated DNAzyme-powered catalytic hairpin assembly for sensitive and accurate microRNA analysis

MicroRNAs (miRNAs) play a significant role in regulating diverse physiological processes, and are regarded as novel diagnostic biomarkers. However, the sensitive and reliable miRNA detection remains a huge challenge. Herein, we propose a proximity ligated initiated magnesium ion (Mg2+)-dependent DNA...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Analytical biochemistry 2023-11, Vol.680, p.115299-115299, Article 115299
Hauptverfasser: Su, Jiaguang, Zheng, Wenjun, Pan, Yanbin
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 115299
container_issue
container_start_page 115299
container_title Analytical biochemistry
container_volume 680
creator Su, Jiaguang
Zheng, Wenjun
Pan, Yanbin
description MicroRNAs (miRNAs) play a significant role in regulating diverse physiological processes, and are regarded as novel diagnostic biomarkers. However, the sensitive and reliable miRNA detection remains a huge challenge. Herein, we propose a proximity ligated initiated magnesium ion (Mg2+)-dependent DNAzyme-powered signal cascade for sensitive, accurate and reliable detection of miRNAs. Three signal amplification processes are involved in this approach, including the target miRNA recycle, DNAzyme powered substrate cleavage, and catalytic hairpin reaction (CHA). Based on this, the approach shows a low limit of detection of 523 aM and a wide detection range of 7 orders of magnitudes, which is comparable or superior to most of the former miRNA detection methods. In addition, the approach also possesses a high selectivity to target miRNA, suggesting a potential promising future of the approach for rapid detection of miRNAs in the application of developing novel tools for skin cancer diagnosis, and recovery evaluation. [Display omitted] •Sensitive and reliable detection of miRNAs is highly-desired.•We propose a proximity ligated initiated magnesium ion (Mg2+)-dependent DNAzyme-powered signal cascade strategy for miRNA detection.•Target mediated proximity ligation endows the method a high specificity.•The approach shows a low limit of detection of 523 aM and a wide detection range of 7 orders of magnitudes.
doi_str_mv 10.1016/j.ab.2023.115299
format Article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_2942103402</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S0003269723002646</els_id><sourcerecordid>2857848959</sourcerecordid><originalsourceid>FETCH-LOGICAL-c360t-19f9311d78da1440a376f79e9c483e6da1faf2762f9b9f6d453e881d9bbfbc663</originalsourceid><addsrcrecordid>eNqFkc1LxDAQxYMouH7cPebopWvStGnjbfEbREX0HNJ0orP0Y02yav3rjaxX8TTM8H4P3jxCjjibc8blyXJumnnOcjHnvMyV2iIzzpTMmGBqm8wYYyLLpap2yV4IS8Y4L0o5I_HBj5_YY5xohy8m4jhQHDCiidDS87vF19RDtho_wKfdmmi6KaKlrwb9CgdqQoC-6SbqRk8DDCGh70DN0FJj7donG9qj9ePj3SJdEx0wHJAdZ7oAh79znzxfXjydXWe391c3Z4vbzArJYsaVU4Lztqpbw4uCGVFJVylQtqgFyHR0xuWVzJ1qlJNtUQqoa96qpnGNlVLsk-ON78qPb2sIUfcYLHSdGWBcB52rIudMFOlr_0rrsqqLWpUqSdlGmlKF4MHplcfe-Elzpn-60EttGv3Thd50kZDTDQIp7TuC18EiDBZa9GCjbkf8G_4GgNKSmA</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2857848959</pqid></control><display><type>article</type><title>Proximity ligation initiated DNAzyme-powered catalytic hairpin assembly for sensitive and accurate microRNA analysis</title><source>Elsevier ScienceDirect Journals Complete</source><creator>Su, Jiaguang ; Zheng, Wenjun ; Pan, Yanbin</creator><creatorcontrib>Su, Jiaguang ; Zheng, Wenjun ; Pan, Yanbin</creatorcontrib><description>MicroRNAs (miRNAs) play a significant role in regulating diverse physiological processes, and are regarded as novel diagnostic biomarkers. However, the sensitive and reliable miRNA detection remains a huge challenge. Herein, we propose a proximity ligated initiated magnesium ion (Mg2+)-dependent DNAzyme-powered signal cascade for sensitive, accurate and reliable detection of miRNAs. Three signal amplification processes are involved in this approach, including the target miRNA recycle, DNAzyme powered substrate cleavage, and catalytic hairpin reaction (CHA). Based on this, the approach shows a low limit of detection of 523 aM and a wide detection range of 7 orders of magnitudes, which is comparable or superior to most of the former miRNA detection methods. In addition, the approach also possesses a high selectivity to target miRNA, suggesting a potential promising future of the approach for rapid detection of miRNAs in the application of developing novel tools for skin cancer diagnosis, and recovery evaluation. [Display omitted] •Sensitive and reliable detection of miRNAs is highly-desired.•We propose a proximity ligated initiated magnesium ion (Mg2+)-dependent DNAzyme-powered signal cascade strategy for miRNA detection.•Target mediated proximity ligation endows the method a high specificity.•The approach shows a low limit of detection of 523 aM and a wide detection range of 7 orders of magnitudes.</description><identifier>ISSN: 0003-2697</identifier><identifier>EISSN: 1096-0309</identifier><identifier>DOI: 10.1016/j.ab.2023.115299</identifier><language>eng</language><publisher>Elsevier Inc</publisher><subject>biomarkers ; Catalytic hairpin reaction (CHA) ; detection limit ; DNAzyme ; magnesium ; microRNA ; MicroRNAs (miRNAs) ; Proximity ligation ; rapid methods</subject><ispartof>Analytical biochemistry, 2023-11, Vol.680, p.115299-115299, Article 115299</ispartof><rights>2023 Elsevier Inc.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c360t-19f9311d78da1440a376f79e9c483e6da1faf2762f9b9f6d453e881d9bbfbc663</citedby><cites>FETCH-LOGICAL-c360t-19f9311d78da1440a376f79e9c483e6da1faf2762f9b9f6d453e881d9bbfbc663</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0003269723002646$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65534</link.rule.ids></links><search><creatorcontrib>Su, Jiaguang</creatorcontrib><creatorcontrib>Zheng, Wenjun</creatorcontrib><creatorcontrib>Pan, Yanbin</creatorcontrib><title>Proximity ligation initiated DNAzyme-powered catalytic hairpin assembly for sensitive and accurate microRNA analysis</title><title>Analytical biochemistry</title><description>MicroRNAs (miRNAs) play a significant role in regulating diverse physiological processes, and are regarded as novel diagnostic biomarkers. However, the sensitive and reliable miRNA detection remains a huge challenge. Herein, we propose a proximity ligated initiated magnesium ion (Mg2+)-dependent DNAzyme-powered signal cascade for sensitive, accurate and reliable detection of miRNAs. Three signal amplification processes are involved in this approach, including the target miRNA recycle, DNAzyme powered substrate cleavage, and catalytic hairpin reaction (CHA). Based on this, the approach shows a low limit of detection of 523 aM and a wide detection range of 7 orders of magnitudes, which is comparable or superior to most of the former miRNA detection methods. In addition, the approach also possesses a high selectivity to target miRNA, suggesting a potential promising future of the approach for rapid detection of miRNAs in the application of developing novel tools for skin cancer diagnosis, and recovery evaluation. [Display omitted] •Sensitive and reliable detection of miRNAs is highly-desired.•We propose a proximity ligated initiated magnesium ion (Mg2+)-dependent DNAzyme-powered signal cascade strategy for miRNA detection.•Target mediated proximity ligation endows the method a high specificity.•The approach shows a low limit of detection of 523 aM and a wide detection range of 7 orders of magnitudes.</description><subject>biomarkers</subject><subject>Catalytic hairpin reaction (CHA)</subject><subject>detection limit</subject><subject>DNAzyme</subject><subject>magnesium</subject><subject>microRNA</subject><subject>MicroRNAs (miRNAs)</subject><subject>Proximity ligation</subject><subject>rapid methods</subject><issn>0003-2697</issn><issn>1096-0309</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><recordid>eNqFkc1LxDAQxYMouH7cPebopWvStGnjbfEbREX0HNJ0orP0Y02yav3rjaxX8TTM8H4P3jxCjjibc8blyXJumnnOcjHnvMyV2iIzzpTMmGBqm8wYYyLLpap2yV4IS8Y4L0o5I_HBj5_YY5xohy8m4jhQHDCiidDS87vF19RDtho_wKfdmmi6KaKlrwb9CgdqQoC-6SbqRk8DDCGh70DN0FJj7donG9qj9ePj3SJdEx0wHJAdZ7oAh79znzxfXjydXWe391c3Z4vbzArJYsaVU4Lztqpbw4uCGVFJVylQtqgFyHR0xuWVzJ1qlJNtUQqoa96qpnGNlVLsk-ON78qPb2sIUfcYLHSdGWBcB52rIudMFOlr_0rrsqqLWpUqSdlGmlKF4MHplcfe-Elzpn-60EttGv3Thd50kZDTDQIp7TuC18EiDBZa9GCjbkf8G_4GgNKSmA</recordid><startdate>20231101</startdate><enddate>20231101</enddate><creator>Su, Jiaguang</creator><creator>Zheng, Wenjun</creator><creator>Pan, Yanbin</creator><general>Elsevier Inc</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7S9</scope><scope>L.6</scope></search><sort><creationdate>20231101</creationdate><title>Proximity ligation initiated DNAzyme-powered catalytic hairpin assembly for sensitive and accurate microRNA analysis</title><author>Su, Jiaguang ; Zheng, Wenjun ; Pan, Yanbin</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c360t-19f9311d78da1440a376f79e9c483e6da1faf2762f9b9f6d453e881d9bbfbc663</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>biomarkers</topic><topic>Catalytic hairpin reaction (CHA)</topic><topic>detection limit</topic><topic>DNAzyme</topic><topic>magnesium</topic><topic>microRNA</topic><topic>MicroRNAs (miRNAs)</topic><topic>Proximity ligation</topic><topic>rapid methods</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Su, Jiaguang</creatorcontrib><creatorcontrib>Zheng, Wenjun</creatorcontrib><creatorcontrib>Pan, Yanbin</creatorcontrib><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><jtitle>Analytical biochemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Su, Jiaguang</au><au>Zheng, Wenjun</au><au>Pan, Yanbin</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Proximity ligation initiated DNAzyme-powered catalytic hairpin assembly for sensitive and accurate microRNA analysis</atitle><jtitle>Analytical biochemistry</jtitle><date>2023-11-01</date><risdate>2023</risdate><volume>680</volume><spage>115299</spage><epage>115299</epage><pages>115299-115299</pages><artnum>115299</artnum><issn>0003-2697</issn><eissn>1096-0309</eissn><abstract>MicroRNAs (miRNAs) play a significant role in regulating diverse physiological processes, and are regarded as novel diagnostic biomarkers. However, the sensitive and reliable miRNA detection remains a huge challenge. Herein, we propose a proximity ligated initiated magnesium ion (Mg2+)-dependent DNAzyme-powered signal cascade for sensitive, accurate and reliable detection of miRNAs. Three signal amplification processes are involved in this approach, including the target miRNA recycle, DNAzyme powered substrate cleavage, and catalytic hairpin reaction (CHA). Based on this, the approach shows a low limit of detection of 523 aM and a wide detection range of 7 orders of magnitudes, which is comparable or superior to most of the former miRNA detection methods. In addition, the approach also possesses a high selectivity to target miRNA, suggesting a potential promising future of the approach for rapid detection of miRNAs in the application of developing novel tools for skin cancer diagnosis, and recovery evaluation. [Display omitted] •Sensitive and reliable detection of miRNAs is highly-desired.•We propose a proximity ligated initiated magnesium ion (Mg2+)-dependent DNAzyme-powered signal cascade strategy for miRNA detection.•Target mediated proximity ligation endows the method a high specificity.•The approach shows a low limit of detection of 523 aM and a wide detection range of 7 orders of magnitudes.</abstract><pub>Elsevier Inc</pub><doi>10.1016/j.ab.2023.115299</doi><tpages>1</tpages></addata></record>
fulltext fulltext
identifier ISSN: 0003-2697
ispartof Analytical biochemistry, 2023-11, Vol.680, p.115299-115299, Article 115299
issn 0003-2697
1096-0309
language eng
recordid cdi_proquest_miscellaneous_2942103402
source Elsevier ScienceDirect Journals Complete
subjects biomarkers
Catalytic hairpin reaction (CHA)
detection limit
DNAzyme
magnesium
microRNA
MicroRNAs (miRNAs)
Proximity ligation
rapid methods
title Proximity ligation initiated DNAzyme-powered catalytic hairpin assembly for sensitive and accurate microRNA analysis
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-13T17%3A37%3A34IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Proximity%20ligation%20initiated%20DNAzyme-powered%20catalytic%20hairpin%20assembly%20for%20sensitive%20and%20accurate%20microRNA%20analysis&rft.jtitle=Analytical%20biochemistry&rft.au=Su,%20Jiaguang&rft.date=2023-11-01&rft.volume=680&rft.spage=115299&rft.epage=115299&rft.pages=115299-115299&rft.artnum=115299&rft.issn=0003-2697&rft.eissn=1096-0309&rft_id=info:doi/10.1016/j.ab.2023.115299&rft_dat=%3Cproquest_cross%3E2857848959%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2857848959&rft_id=info:pmid/&rft_els_id=S0003269723002646&rfr_iscdi=true