The Biocatalytic Potential of Aromatic Ammonia–Lyase from Loktanella atrilutea

Characterization of the aromatic ammonia–lyase from Loktanella atrilutea (LaAAL) revealed reduced activity towards canonical AAL substrates: l‐Phe, l‐Tyr, and l‐His, contrasted by its pronounced efficiency towards 3,4‐dimethoxy‐l‐phenylalanine. Assessing the optimal conditions, LaAAL exhibited maxim...

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Veröffentlicht in:Chembiochem : a European journal of chemical biology 2024-05, Vol.25 (9), p.e202400011-n/a
Hauptverfasser: Tomoiaga, R. B., Ágoston, G., Boros, K., Nagy, L. C., Toşa, M. I., Paizs, C., Bencze, L. C.
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container_issue 9
container_start_page e202400011
container_title Chembiochem : a European journal of chemical biology
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creator Tomoiaga, R. B.
Ágoston, G.
Boros, K.
Nagy, L. C.
Toşa, M. I.
Paizs, C.
Bencze, L. C.
description Characterization of the aromatic ammonia–lyase from Loktanella atrilutea (LaAAL) revealed reduced activity towards canonical AAL substrates: l‐Phe, l‐Tyr, and l‐His, contrasted by its pronounced efficiency towards 3,4‐dimethoxy‐l‐phenylalanine. Assessing the optimal conditions, LaAAL exhibited maximal activity at pH 9.5 in the ammonia elimination reaction route, distinct from the typical pH ranges of most PALs and TALs. Within the exploration of the ammonia source for the opposite, synthetically valuable ammonia addition reaction, the stability of LaAAL exhibited a positive correlation with the ammonia concentration, with the highest stability in 4 M ammonium carbamate of unadjusted pH of ~9.5. While the enzyme activity increased with rising temperatures yet, the highest operational stability and highest stationary conversions of LaAAL were observed at 30 °C. The substrate scope analysis highlighted the catalytic adaptability of LaAAL in the hydroamination of diverse cinnamic acids, especially of meta‐substituted and di‐/multi–substituted analogues, with structural modelling exposing steric clashes between the substrates’ ortho–substituents and catalytic site residues. LaAAL showed a predilection for ammonia elimination, while classifying as a tyrosine ammonia–lyase (TAL) among the natural AAL classes. However, its distinctive attributes, such as genomic context, unique substrate specificity and catalytic fingerprint, suggest a potential natural role beyond those of known AAL classes. The aromatic ammonia–lyase from Loktanella atrilutea (LaAAL) displays a high activity towards 3,4‐dimethoxy trans–cinnamic acid, with a surprisingly diminished activity towards natural AAL substrates. Under the optimal reaction conditions LaAAL exhibited versatility for the transformation of various cinnamic acids. While LaAAL might be classified as a tyrosine ammonia‐lyase (TAL, E.C. 4.3.1.23), its strongly distinctive attributes argue for an elemental role in the transformation of non‐natural phenylalanines.
doi_str_mv 10.1002/cbic.202400011
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While the enzyme activity increased with rising temperatures yet, the highest operational stability and highest stationary conversions of LaAAL were observed at 30 °C. The substrate scope analysis highlighted the catalytic adaptability of LaAAL in the hydroamination of diverse cinnamic acids, especially of meta‐substituted and di‐/multi–substituted analogues, with structural modelling exposing steric clashes between the substrates’ ortho–substituents and catalytic site residues. LaAAL showed a predilection for ammonia elimination, while classifying as a tyrosine ammonia–lyase (TAL) among the natural AAL classes. However, its distinctive attributes, such as genomic context, unique substrate specificity and catalytic fingerprint, suggest a potential natural role beyond those of known AAL classes. 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B.</au><au>Ágoston, G.</au><au>Boros, K.</au><au>Nagy, L. C.</au><au>Toşa, M. I.</au><au>Paizs, C.</au><au>Bencze, L. C.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The Biocatalytic Potential of Aromatic Ammonia–Lyase from Loktanella atrilutea</atitle><jtitle>Chembiochem : a European journal of chemical biology</jtitle><addtitle>Chembiochem</addtitle><date>2024-05-02</date><risdate>2024</risdate><volume>25</volume><issue>9</issue><spage>e202400011</spage><epage>n/a</epage><pages>e202400011-n/a</pages><issn>1439-4227</issn><eissn>1439-7633</eissn><abstract>Characterization of the aromatic ammonia–lyase from Loktanella atrilutea (LaAAL) revealed reduced activity towards canonical AAL substrates: l‐Phe, l‐Tyr, and l‐His, contrasted by its pronounced efficiency towards 3,4‐dimethoxy‐l‐phenylalanine. Assessing the optimal conditions, LaAAL exhibited maximal activity at pH 9.5 in the ammonia elimination reaction route, distinct from the typical pH ranges of most PALs and TALs. Within the exploration of the ammonia source for the opposite, synthetically valuable ammonia addition reaction, the stability of LaAAL exhibited a positive correlation with the ammonia concentration, with the highest stability in 4 M ammonium carbamate of unadjusted pH of ~9.5. While the enzyme activity increased with rising temperatures yet, the highest operational stability and highest stationary conversions of LaAAL were observed at 30 °C. The substrate scope analysis highlighted the catalytic adaptability of LaAAL in the hydroamination of diverse cinnamic acids, especially of meta‐substituted and di‐/multi–substituted analogues, with structural modelling exposing steric clashes between the substrates’ ortho–substituents and catalytic site residues. LaAAL showed a predilection for ammonia elimination, while classifying as a tyrosine ammonia–lyase (TAL) among the natural AAL classes. However, its distinctive attributes, such as genomic context, unique substrate specificity and catalytic fingerprint, suggest a potential natural role beyond those of known AAL classes. The aromatic ammonia–lyase from Loktanella atrilutea (LaAAL) displays a high activity towards 3,4‐dimethoxy trans–cinnamic acid, with a surprisingly diminished activity towards natural AAL substrates. Under the optimal reaction conditions LaAAL exhibited versatility for the transformation of various cinnamic acids. 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subjects Adaptability
Ammonia
Ammonia - chemistry
Ammonia - metabolism
ammonia addition reactions
Ammonia-Lyases - chemistry
Ammonia-Lyases - metabolism
Ammonium
aromatic ammonia–lyases
Biocatalysis
Catalytic Domain
Cinnamic acid
Enzymatic activity
Enzyme activity
Hydrogen-Ion Concentration
l-phenylalanines
Models, Molecular
pH effects
Phenylalanine
Stability
Substitutes
substrate scope
Substrate Specificity
Substrates
Tyrosine
title The Biocatalytic Potential of Aromatic Ammonia–Lyase from Loktanella atrilutea
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