Cell counting to monitor swab efficiency
Plastic bags, such as ziplock bags, have been used to transport illicit materials worldwide; however, very few studies have tried to optimize the recovery of DNA from these items. This study reports on the best combination of swabs and moistening solution for the greatest recovery of cellular materi...
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Veröffentlicht in: | Journal of forensic sciences 2024-05, Vol.69 (3), p.1002-1010 |
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description | Plastic bags, such as ziplock bags, have been used to transport illicit materials worldwide; however, very few studies have tried to optimize the recovery of DNA from these items. This study reports on the best combination of swabs and moistening solution for the greatest recovery of cellular material from ziplock bags. Five swabs, two different variations of Copan Diagnostics nylon 4N6FLOQSwabs, one Medical Wire rayon DRYSWAB, one IsoHelix rayon swab, and one Livingstone cotton swab, were evaluated with two moistening solutions, Triton X‐100 in either distilled water or isopropanol. Fingermarks were deposited on ziplock bags and stained with Diamond™ Nucleic Acid Dye to allow visualization of the cells pre‐ and post‐swabbing to determine the number of cells recovered. Based on cell counting data, swabs moistened with Triton X‐100 in distilled water performed better than those moistened with isopropanol. Livingstone cotton swabs had the worst recovery of cellular material, while the other swabs tested had no significant difference in their respective solutions. A comparison of the best three swabs for cellular recovery yielded no differences in the DNA concentration extracted. A linear relationship was observed between the log number of cells recovered by swabbing and the DNA concentration following extraction and quantification. The process of monitoring cell collection using fluorescence microscopy on ziplock bags allowed evaluation of swabbing efficacy. Additionally, this study highlights the ability to evaluate cellular recovery independently of traditional extraction, quantification, or profiling techniques which may unequally affect samples. |
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This study reports on the best combination of swabs and moistening solution for the greatest recovery of cellular material from ziplock bags. Five swabs, two different variations of Copan Diagnostics nylon 4N6FLOQSwabs, one Medical Wire rayon DRYSWAB, one IsoHelix rayon swab, and one Livingstone cotton swab, were evaluated with two moistening solutions, Triton X‐100 in either distilled water or isopropanol. Fingermarks were deposited on ziplock bags and stained with Diamond™ Nucleic Acid Dye to allow visualization of the cells pre‐ and post‐swabbing to determine the number of cells recovered. Based on cell counting data, swabs moistened with Triton X‐100 in distilled water performed better than those moistened with isopropanol. Livingstone cotton swabs had the worst recovery of cellular material, while the other swabs tested had no significant difference in their respective solutions. A comparison of the best three swabs for cellular recovery yielded no differences in the DNA concentration extracted. A linear relationship was observed between the log number of cells recovered by swabbing and the DNA concentration following extraction and quantification. The process of monitoring cell collection using fluorescence microscopy on ziplock bags allowed evaluation of swabbing efficacy. Additionally, this study highlights the ability to evaluate cellular recovery independently of traditional extraction, quantification, or profiling techniques which may unequally affect samples.</description><identifier>ISSN: 0022-1198</identifier><identifier>EISSN: 1556-4029</identifier><identifier>DOI: 10.1111/1556-4029.15495</identifier><identifier>PMID: 38380584</identifier><language>eng</language><publisher>United States: Wiley Subscription Services, Inc</publisher><subject>2-Propanol ; Acid dyes ; Cell Count ; Cotton ; Dermatoglyphics ; diamond dye ; Distilled water ; DNA - analysis ; DNA - isolation & purification ; DNA Fingerprinting ; Fingerprints ; fluorescence microscopy ; Humans ; Isopropanol ; Microscopy, Fluorescence ; Nucleic acids ; Octoxynol ; Rayon ; Specimen Handling - instrumentation ; Specimen Handling - methods ; swabs ; touch DNA ; Wetting ; Ziplock bags</subject><ispartof>Journal of forensic sciences, 2024-05, Vol.69 (3), p.1002-1010</ispartof><rights>2024 The Authors. published by Wiley Periodicals LLC on behalf of American Academy of Forensic Sciences.</rights><rights>2024 The Authors. Journal of Forensic Sciences published by Wiley Periodicals LLC on behalf of American Academy of Forensic Sciences.</rights><rights>2024. This article is published under http://creativecommons.org/licenses/by-nc-nd/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c3665-43ece9f0c61b9995a46fdd837fb7bf1ee80217a8dd2574b202d1ff4b5cc8f90c3</cites><orcidid>0000-0001-5890-5548 ; 0009-0002-6047-362X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2F1556-4029.15495$$EPDF$$P50$$Gwiley$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2F1556-4029.15495$$EHTML$$P50$$Gwiley$$Hfree_for_read</linktohtml><link.rule.ids>314,780,784,1417,27924,27925,45574,45575</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38380584$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Nolan, Madison</creatorcontrib><creatorcontrib>Linacre, Adrian</creatorcontrib><title>Cell counting to monitor swab efficiency</title><title>Journal of forensic sciences</title><addtitle>J Forensic Sci</addtitle><description>Plastic bags, such as ziplock bags, have been used to transport illicit materials worldwide; however, very few studies have tried to optimize the recovery of DNA from these items. This study reports on the best combination of swabs and moistening solution for the greatest recovery of cellular material from ziplock bags. Five swabs, two different variations of Copan Diagnostics nylon 4N6FLOQSwabs, one Medical Wire rayon DRYSWAB, one IsoHelix rayon swab, and one Livingstone cotton swab, were evaluated with two moistening solutions, Triton X‐100 in either distilled water or isopropanol. Fingermarks were deposited on ziplock bags and stained with Diamond™ Nucleic Acid Dye to allow visualization of the cells pre‐ and post‐swabbing to determine the number of cells recovered. Based on cell counting data, swabs moistened with Triton X‐100 in distilled water performed better than those moistened with isopropanol. Livingstone cotton swabs had the worst recovery of cellular material, while the other swabs tested had no significant difference in their respective solutions. A comparison of the best three swabs for cellular recovery yielded no differences in the DNA concentration extracted. A linear relationship was observed between the log number of cells recovered by swabbing and the DNA concentration following extraction and quantification. The process of monitoring cell collection using fluorescence microscopy on ziplock bags allowed evaluation of swabbing efficacy. Additionally, this study highlights the ability to evaluate cellular recovery independently of traditional extraction, quantification, or profiling techniques which may unequally affect samples.</description><subject>2-Propanol</subject><subject>Acid dyes</subject><subject>Cell Count</subject><subject>Cotton</subject><subject>Dermatoglyphics</subject><subject>diamond dye</subject><subject>Distilled water</subject><subject>DNA - analysis</subject><subject>DNA - isolation & purification</subject><subject>DNA Fingerprinting</subject><subject>Fingerprints</subject><subject>fluorescence microscopy</subject><subject>Humans</subject><subject>Isopropanol</subject><subject>Microscopy, Fluorescence</subject><subject>Nucleic acids</subject><subject>Octoxynol</subject><subject>Rayon</subject><subject>Specimen Handling - instrumentation</subject><subject>Specimen Handling - methods</subject><subject>swabs</subject><subject>touch DNA</subject><subject>Wetting</subject><subject>Ziplock bags</subject><issn>0022-1198</issn><issn>1556-4029</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>24P</sourceid><sourceid>WIN</sourceid><sourceid>EIF</sourceid><recordid>eNqFkE1Lw0AQhhdRbK2evUnASy9pZz-ze5TS-kGhFz0vyWZXUpJszSaU_ntTU3vw4lwGhmdeXh6E7jHMcD9zzLmIGRA1w5wpfoHG58slGgMQEmOs5AjdhLAFAIEFvkYjKqkELtkYTRe2LCPju7ot6s-o9VHl66L1TRT2aRZZ5wpT2NocbtGVS8tg7057gj5Wy_fFS7zePL8untaxoULwmFFrrHJgBM6UUjxlwuW5pInLksxhayUQnKQyzwlPWEaA5Ng5lnFjpFNg6ARNh9xd4786G1pdFcH0JdPa-i5ooojiVAHlPfr4B936rqn7dpoC4yB4ImhPzQfKND6Exjq9a4oqbQ4agz5K1Edl-qhM_0jsPx5OuV1W2fzM_1rrAT4A-6K0h__y9NtqMwR_A8zceaY</recordid><startdate>202405</startdate><enddate>202405</enddate><creator>Nolan, Madison</creator><creator>Linacre, Adrian</creator><general>Wiley Subscription Services, Inc</general><scope>24P</scope><scope>WIN</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>K7.</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0001-5890-5548</orcidid><orcidid>https://orcid.org/0009-0002-6047-362X</orcidid></search><sort><creationdate>202405</creationdate><title>Cell counting to monitor swab efficiency</title><author>Nolan, Madison ; Linacre, Adrian</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3665-43ece9f0c61b9995a46fdd837fb7bf1ee80217a8dd2574b202d1ff4b5cc8f90c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>2-Propanol</topic><topic>Acid dyes</topic><topic>Cell Count</topic><topic>Cotton</topic><topic>Dermatoglyphics</topic><topic>diamond dye</topic><topic>Distilled water</topic><topic>DNA - analysis</topic><topic>DNA - isolation & purification</topic><topic>DNA Fingerprinting</topic><topic>Fingerprints</topic><topic>fluorescence microscopy</topic><topic>Humans</topic><topic>Isopropanol</topic><topic>Microscopy, Fluorescence</topic><topic>Nucleic acids</topic><topic>Octoxynol</topic><topic>Rayon</topic><topic>Specimen Handling - instrumentation</topic><topic>Specimen Handling - methods</topic><topic>swabs</topic><topic>touch DNA</topic><topic>Wetting</topic><topic>Ziplock bags</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Nolan, Madison</creatorcontrib><creatorcontrib>Linacre, Adrian</creatorcontrib><collection>Wiley-Blackwell Open Access Titles</collection><collection>Wiley Free Content</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Criminal Justice (Alumni)</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of forensic sciences</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Nolan, Madison</au><au>Linacre, Adrian</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Cell counting to monitor swab efficiency</atitle><jtitle>Journal of forensic sciences</jtitle><addtitle>J Forensic Sci</addtitle><date>2024-05</date><risdate>2024</risdate><volume>69</volume><issue>3</issue><spage>1002</spage><epage>1010</epage><pages>1002-1010</pages><issn>0022-1198</issn><eissn>1556-4029</eissn><abstract>Plastic bags, such as ziplock bags, have been used to transport illicit materials worldwide; however, very few studies have tried to optimize the recovery of DNA from these items. This study reports on the best combination of swabs and moistening solution for the greatest recovery of cellular material from ziplock bags. Five swabs, two different variations of Copan Diagnostics nylon 4N6FLOQSwabs, one Medical Wire rayon DRYSWAB, one IsoHelix rayon swab, and one Livingstone cotton swab, were evaluated with two moistening solutions, Triton X‐100 in either distilled water or isopropanol. Fingermarks were deposited on ziplock bags and stained with Diamond™ Nucleic Acid Dye to allow visualization of the cells pre‐ and post‐swabbing to determine the number of cells recovered. Based on cell counting data, swabs moistened with Triton X‐100 in distilled water performed better than those moistened with isopropanol. Livingstone cotton swabs had the worst recovery of cellular material, while the other swabs tested had no significant difference in their respective solutions. A comparison of the best three swabs for cellular recovery yielded no differences in the DNA concentration extracted. A linear relationship was observed between the log number of cells recovered by swabbing and the DNA concentration following extraction and quantification. The process of monitoring cell collection using fluorescence microscopy on ziplock bags allowed evaluation of swabbing efficacy. Additionally, this study highlights the ability to evaluate cellular recovery independently of traditional extraction, quantification, or profiling techniques which may unequally affect samples.</abstract><cop>United States</cop><pub>Wiley Subscription Services, Inc</pub><pmid>38380584</pmid><doi>10.1111/1556-4029.15495</doi><tpages>9</tpages><orcidid>https://orcid.org/0000-0001-5890-5548</orcidid><orcidid>https://orcid.org/0009-0002-6047-362X</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | 2-Propanol Acid dyes Cell Count Cotton Dermatoglyphics diamond dye Distilled water DNA - analysis DNA - isolation & purification DNA Fingerprinting Fingerprints fluorescence microscopy Humans Isopropanol Microscopy, Fluorescence Nucleic acids Octoxynol Rayon Specimen Handling - instrumentation Specimen Handling - methods swabs touch DNA Wetting Ziplock bags |
title | Cell counting to monitor swab efficiency |
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