SWI/SNF chromatin remodeling complex in pancreatic ductal adenocarcinoma: Clinicopathologic and immunohistochemical study
The SWItch/Sucrose Non-Fermentable (SWI/SNF) complex is a multimeric protein involved in transcription regulation and DNA damage repair. SWI/SNF complex abnormalities are observed in approximately 14–34 % of pancreatic ductal adenocarcinomas (PDACs). Herein, we evaluated the immunohistochemical expr...
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Veröffentlicht in: | Human pathology 2024-02, Vol.144, p.40-45 |
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creator | Chen, Irene Y. Ettel, Mark G. Bell, Phoenix D. Huber, Aaron R. Findeis-Hosey, Jennifer J. Wang, Wenjia Hezel, Aram F. Dunne, Richard F. Drage, Michael G. Agostini-Vulaj, Diana |
description | The SWItch/Sucrose Non-Fermentable (SWI/SNF) complex is a multimeric protein involved in transcription regulation and DNA damage repair. SWI/SNF complex abnormalities are observed in approximately 14–34 % of pancreatic ductal adenocarcinomas (PDACs). Herein, we evaluated the immunohistochemical expression of a subset of the SWI/SNF complex proteins (ARID1A, SMARCA4/BRG1, SMARCA2/BRM, and SMARCB1/INI1) within our PDAC tissue microarray to determine whether SWI/SNF loss is associated with any clinicopathologic features or patient survival in PDAC. In our cohort, 13 of 353 (3.7 %) PDACs showed deficient SWI/SNF complex expression, which included 11 (3.1 %) with ARID1A loss, 1 (0.3 %) with SMARCA4/BRG1 loss, and 1 (0.3 %) with SMARCA2/BRM loss. All cases were SMARCB1/INI1 proficient. The SWI/SNF-deficient PDACs were more frequently identified in older patients with a mean age of 71.6 years (SD = 7.78) compared to the SWI/SNF-proficient PDACs which occurred at a mean age of 65.2 years (SD = 10.95) (P = 0.013). The SWI/SNF-deficient PDACs were associated with higher histologic grade, compared to the SWI/SNF-proficient PDACs (P = 0.029). No other significant clinicopathologic differences were noted between SWI/SNF-deficient and SWI/SNF-proficient PDACs. On follow-up, no significant differences were seen for overall survival and progression-free survival between SWI/SNF-deficient and SWI/SNF-proficient PDACs (both with P > 0.05). In summary, SWI/SNF-deficient PDACs most frequently demonstrate ARID1A loss. SWI/SNF-deficient PDACs are associated with older age and higher histologic grade. No other significant associations among other clinicopathologic parameters were seen in SWI/SNF-deficient PDACs including survival. |
doi_str_mv | 10.1016/j.humpath.2024.01.013 |
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SWI/SNF complex abnormalities are observed in approximately 14–34 % of pancreatic ductal adenocarcinomas (PDACs). Herein, we evaluated the immunohistochemical expression of a subset of the SWI/SNF complex proteins (ARID1A, SMARCA4/BRG1, SMARCA2/BRM, and SMARCB1/INI1) within our PDAC tissue microarray to determine whether SWI/SNF loss is associated with any clinicopathologic features or patient survival in PDAC. In our cohort, 13 of 353 (3.7 %) PDACs showed deficient SWI/SNF complex expression, which included 11 (3.1 %) with ARID1A loss, 1 (0.3 %) with SMARCA4/BRG1 loss, and 1 (0.3 %) with SMARCA2/BRM loss. All cases were SMARCB1/INI1 proficient. The SWI/SNF-deficient PDACs were more frequently identified in older patients with a mean age of 71.6 years (SD = 7.78) compared to the SWI/SNF-proficient PDACs which occurred at a mean age of 65.2 years (SD = 10.95) (P = 0.013). The SWI/SNF-deficient PDACs were associated with higher histologic grade, compared to the SWI/SNF-proficient PDACs (P = 0.029). No other significant clinicopathologic differences were noted between SWI/SNF-deficient and SWI/SNF-proficient PDACs. On follow-up, no significant differences were seen for overall survival and progression-free survival between SWI/SNF-deficient and SWI/SNF-proficient PDACs (both with P > 0.05). In summary, SWI/SNF-deficient PDACs most frequently demonstrate ARID1A loss. SWI/SNF-deficient PDACs are associated with older age and higher histologic grade. No other significant associations among other clinicopathologic parameters were seen in SWI/SNF-deficient PDACs including survival.</description><identifier>ISSN: 0046-8177</identifier><identifier>ISSN: 1532-8392</identifier><identifier>EISSN: 1532-8392</identifier><identifier>DOI: 10.1016/j.humpath.2024.01.013</identifier><identifier>PMID: 38307342</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Aged ; Carcinoma, Pancreatic Ductal - genetics ; Chromatin Assembly and Disassembly ; DNA Helicases ; Heterogeneity ; Humans ; Loss-of-function ; Nuclear Proteins ; Pancreatic ductal adenocarcinoma (PDAC) ; Pancreatic Neoplasms - genetics ; SMARC ; SWItch/Sucrose non-Fermentable complex (SWI/SNF) ; Transcription Factors</subject><ispartof>Human pathology, 2024-02, Vol.144, p.40-45</ispartof><rights>2024 Elsevier Inc.</rights><rights>Copyright © 2024 Elsevier Inc. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c313t-43fe03f7155bbfd29538a2659835912ac439d460ff20cdd61813674c9930c38a3</cites><orcidid>0000-0001-5202-2111</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.humpath.2024.01.013$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,780,784,3549,27923,27924,45994</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38307342$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Chen, Irene Y.</creatorcontrib><creatorcontrib>Ettel, Mark G.</creatorcontrib><creatorcontrib>Bell, Phoenix D.</creatorcontrib><creatorcontrib>Huber, Aaron R.</creatorcontrib><creatorcontrib>Findeis-Hosey, Jennifer J.</creatorcontrib><creatorcontrib>Wang, Wenjia</creatorcontrib><creatorcontrib>Hezel, Aram F.</creatorcontrib><creatorcontrib>Dunne, Richard F.</creatorcontrib><creatorcontrib>Drage, Michael G.</creatorcontrib><creatorcontrib>Agostini-Vulaj, Diana</creatorcontrib><title>SWI/SNF chromatin remodeling complex in pancreatic ductal adenocarcinoma: Clinicopathologic and immunohistochemical study</title><title>Human pathology</title><addtitle>Hum Pathol</addtitle><description>The SWItch/Sucrose Non-Fermentable (SWI/SNF) complex is a multimeric protein involved in transcription regulation and DNA damage repair. SWI/SNF complex abnormalities are observed in approximately 14–34 % of pancreatic ductal adenocarcinomas (PDACs). Herein, we evaluated the immunohistochemical expression of a subset of the SWI/SNF complex proteins (ARID1A, SMARCA4/BRG1, SMARCA2/BRM, and SMARCB1/INI1) within our PDAC tissue microarray to determine whether SWI/SNF loss is associated with any clinicopathologic features or patient survival in PDAC. In our cohort, 13 of 353 (3.7 %) PDACs showed deficient SWI/SNF complex expression, which included 11 (3.1 %) with ARID1A loss, 1 (0.3 %) with SMARCA4/BRG1 loss, and 1 (0.3 %) with SMARCA2/BRM loss. All cases were SMARCB1/INI1 proficient. The SWI/SNF-deficient PDACs were more frequently identified in older patients with a mean age of 71.6 years (SD = 7.78) compared to the SWI/SNF-proficient PDACs which occurred at a mean age of 65.2 years (SD = 10.95) (P = 0.013). The SWI/SNF-deficient PDACs were associated with higher histologic grade, compared to the SWI/SNF-proficient PDACs (P = 0.029). No other significant clinicopathologic differences were noted between SWI/SNF-deficient and SWI/SNF-proficient PDACs. On follow-up, no significant differences were seen for overall survival and progression-free survival between SWI/SNF-deficient and SWI/SNF-proficient PDACs (both with P > 0.05). In summary, SWI/SNF-deficient PDACs most frequently demonstrate ARID1A loss. SWI/SNF-deficient PDACs are associated with older age and higher histologic grade. No other significant associations among other clinicopathologic parameters were seen in SWI/SNF-deficient PDACs including survival.</description><subject>Aged</subject><subject>Carcinoma, Pancreatic Ductal - genetics</subject><subject>Chromatin Assembly and Disassembly</subject><subject>DNA Helicases</subject><subject>Heterogeneity</subject><subject>Humans</subject><subject>Loss-of-function</subject><subject>Nuclear Proteins</subject><subject>Pancreatic ductal adenocarcinoma (PDAC)</subject><subject>Pancreatic Neoplasms - genetics</subject><subject>SMARC</subject><subject>SWItch/Sucrose non-Fermentable complex (SWI/SNF)</subject><subject>Transcription Factors</subject><issn>0046-8177</issn><issn>1532-8392</issn><issn>1532-8392</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkFGL1DAQx4Mo3nr6EZQ--tK9JNO0jS8ii6cHhz6c4mPITtJrliapSSvutzfLrr4KA4Hh95uZ_Al5zeiWUdbeHLbj6me9jFtOebOlrBQ8IRsmgNc9SP6UbCht2rpnXXdFXuR8oJQx0Yjn5Ap6oB00fEOODz_ubh6-3FY4puj14kKVrI_GTi48Vhj9PNnfVenOOmCyBcDKrLjoqdLGhog6oQvFfFftiuIwnm6KU3wsoA6mct6vIY4uLxFH6x0WMy-rOb4kzwY9Zfvq8l6T77cfv-0-1_dfP93tPtzXCAyWuoHBUhg6JsR-PxguBfSat0L2ICTjGhuQpmnpMHCKxrSsZ9B2DUoJFAsK1-Ttee6c4s_V5kV5l9FOkw42rllxyUEy2lFRUHFGMcWckx3UnJzX6agYVafU1UFdUlen1BVlpaB4by4r1r235p_1N-YCvD8Dtnz0l7NJZXQ2oDUuWVyUie4_K_4A7NGXsw</recordid><startdate>202402</startdate><enddate>202402</enddate><creator>Chen, Irene Y.</creator><creator>Ettel, Mark G.</creator><creator>Bell, Phoenix D.</creator><creator>Huber, Aaron R.</creator><creator>Findeis-Hosey, Jennifer J.</creator><creator>Wang, Wenjia</creator><creator>Hezel, Aram F.</creator><creator>Dunne, Richard F.</creator><creator>Drage, Michael G.</creator><creator>Agostini-Vulaj, Diana</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0001-5202-2111</orcidid></search><sort><creationdate>202402</creationdate><title>SWI/SNF chromatin remodeling complex in pancreatic ductal adenocarcinoma: Clinicopathologic and immunohistochemical study</title><author>Chen, Irene Y. ; Ettel, Mark G. ; Bell, Phoenix D. ; Huber, Aaron R. ; Findeis-Hosey, Jennifer J. ; Wang, Wenjia ; Hezel, Aram F. ; Dunne, Richard F. ; Drage, Michael G. ; Agostini-Vulaj, Diana</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c313t-43fe03f7155bbfd29538a2659835912ac439d460ff20cdd61813674c9930c38a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Aged</topic><topic>Carcinoma, Pancreatic Ductal - genetics</topic><topic>Chromatin Assembly and Disassembly</topic><topic>DNA Helicases</topic><topic>Heterogeneity</topic><topic>Humans</topic><topic>Loss-of-function</topic><topic>Nuclear Proteins</topic><topic>Pancreatic ductal adenocarcinoma (PDAC)</topic><topic>Pancreatic Neoplasms - genetics</topic><topic>SMARC</topic><topic>SWItch/Sucrose non-Fermentable complex (SWI/SNF)</topic><topic>Transcription Factors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Chen, Irene Y.</creatorcontrib><creatorcontrib>Ettel, Mark G.</creatorcontrib><creatorcontrib>Bell, Phoenix D.</creatorcontrib><creatorcontrib>Huber, Aaron R.</creatorcontrib><creatorcontrib>Findeis-Hosey, Jennifer J.</creatorcontrib><creatorcontrib>Wang, Wenjia</creatorcontrib><creatorcontrib>Hezel, Aram F.</creatorcontrib><creatorcontrib>Dunne, Richard F.</creatorcontrib><creatorcontrib>Drage, Michael G.</creatorcontrib><creatorcontrib>Agostini-Vulaj, Diana</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Human pathology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Chen, Irene Y.</au><au>Ettel, Mark G.</au><au>Bell, Phoenix D.</au><au>Huber, Aaron R.</au><au>Findeis-Hosey, Jennifer J.</au><au>Wang, Wenjia</au><au>Hezel, Aram F.</au><au>Dunne, Richard F.</au><au>Drage, Michael G.</au><au>Agostini-Vulaj, Diana</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>SWI/SNF chromatin remodeling complex in pancreatic ductal adenocarcinoma: Clinicopathologic and immunohistochemical study</atitle><jtitle>Human pathology</jtitle><addtitle>Hum Pathol</addtitle><date>2024-02</date><risdate>2024</risdate><volume>144</volume><spage>40</spage><epage>45</epage><pages>40-45</pages><issn>0046-8177</issn><issn>1532-8392</issn><eissn>1532-8392</eissn><abstract>The SWItch/Sucrose Non-Fermentable (SWI/SNF) complex is a multimeric protein involved in transcription regulation and DNA damage repair. SWI/SNF complex abnormalities are observed in approximately 14–34 % of pancreatic ductal adenocarcinomas (PDACs). Herein, we evaluated the immunohistochemical expression of a subset of the SWI/SNF complex proteins (ARID1A, SMARCA4/BRG1, SMARCA2/BRM, and SMARCB1/INI1) within our PDAC tissue microarray to determine whether SWI/SNF loss is associated with any clinicopathologic features or patient survival in PDAC. In our cohort, 13 of 353 (3.7 %) PDACs showed deficient SWI/SNF complex expression, which included 11 (3.1 %) with ARID1A loss, 1 (0.3 %) with SMARCA4/BRG1 loss, and 1 (0.3 %) with SMARCA2/BRM loss. All cases were SMARCB1/INI1 proficient. The SWI/SNF-deficient PDACs were more frequently identified in older patients with a mean age of 71.6 years (SD = 7.78) compared to the SWI/SNF-proficient PDACs which occurred at a mean age of 65.2 years (SD = 10.95) (P = 0.013). The SWI/SNF-deficient PDACs were associated with higher histologic grade, compared to the SWI/SNF-proficient PDACs (P = 0.029). No other significant clinicopathologic differences were noted between SWI/SNF-deficient and SWI/SNF-proficient PDACs. On follow-up, no significant differences were seen for overall survival and progression-free survival between SWI/SNF-deficient and SWI/SNF-proficient PDACs (both with P > 0.05). In summary, SWI/SNF-deficient PDACs most frequently demonstrate ARID1A loss. SWI/SNF-deficient PDACs are associated with older age and higher histologic grade. No other significant associations among other clinicopathologic parameters were seen in SWI/SNF-deficient PDACs including survival.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>38307342</pmid><doi>10.1016/j.humpath.2024.01.013</doi><tpages>6</tpages><orcidid>https://orcid.org/0000-0001-5202-2111</orcidid></addata></record> |
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subjects | Aged Carcinoma, Pancreatic Ductal - genetics Chromatin Assembly and Disassembly DNA Helicases Heterogeneity Humans Loss-of-function Nuclear Proteins Pancreatic ductal adenocarcinoma (PDAC) Pancreatic Neoplasms - genetics SMARC SWItch/Sucrose non-Fermentable complex (SWI/SNF) Transcription Factors |
title | SWI/SNF chromatin remodeling complex in pancreatic ductal adenocarcinoma: Clinicopathologic and immunohistochemical study |
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