Streptomyces herbicida sp. nov., a novel actinomycete with antibacterial and herbicidal activity isolated from soil
A novel actinobacterial strain (NEAU-HV9 ) showing antibacterial activity against and herbicidal activity against L. was isolated from soil sampled in Bama yao Autonomous County, Hechi City, Guangxi Zhuang Autonomous Region. The strain is aerobic and Gram-positive. Phylogenetic analysis based on 16S...
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| Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2024-02, Vol.74 (2) |
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| container_title | International journal of systematic and evolutionary microbiology |
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| creator | Luo, Yanfang Ling, Ling Zhang, Kun Song, Zhengke Zhang, Lida Li, Jiaxin Chen, Jie Xiang, Wensheng Wang, Xiangjing Zhao, Junwei |
| description | A novel actinobacterial strain (NEAU-HV9
) showing antibacterial activity against
and herbicidal activity against
L. was isolated from soil sampled in Bama yao Autonomous County, Hechi City, Guangxi Zhuang Autonomous Region. The strain is aerobic and Gram-positive. Phylogenetic analysis based on 16S rRNA gene sequence indicated that strain NEAU-HV9
belonged to the genus
and showed high 16S rRNA sequence similarity to
1MR-8
(98.90 %),
JR-39
(98.89 %) and
JA03
(98.69 %) and less than 98.5 % similarity to other members of the genus
. The cell wall of strain NEAU-HV9
contained ll-diaminopimelic acid and the whole-cell hydrolysates were galactose, mannose and ribose. The predominant menaquinones were composed of MK-9(H
) and MK-9(H
). The major polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and phosphatidylinositol. The major fatty acids were C
, iso
C
and C
8
. The genomic DNA G+C content of strain NEAU-HV9
was 70.6 mol%. Furthermore, the strain could be clearly distinguished from its closely related type strains by the combination of DNA-DNA hybridization results and some phenotypic characteristics. Meanwhile, strain NEAU-HV9
displayed herbicidal activity. Therefore, strain NEAU-HV9
represents a novel species within the genus
, for which the name
sp. nov. is proposed, with strain NEAU-HV9
(=CCTCC AA 2019088
=DSM 113364
) as the type strain. |
| doi_str_mv | 10.1099/ijsem.0.006263 |
| format | Article |
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) showing antibacterial activity against
and herbicidal activity against
L. was isolated from soil sampled in Bama yao Autonomous County, Hechi City, Guangxi Zhuang Autonomous Region. The strain is aerobic and Gram-positive. Phylogenetic analysis based on 16S rRNA gene sequence indicated that strain NEAU-HV9
belonged to the genus
and showed high 16S rRNA sequence similarity to
1MR-8
(98.90 %),
JR-39
(98.89 %) and
JA03
(98.69 %) and less than 98.5 % similarity to other members of the genus
. The cell wall of strain NEAU-HV9
contained ll-diaminopimelic acid and the whole-cell hydrolysates were galactose, mannose and ribose. The predominant menaquinones were composed of MK-9(H
) and MK-9(H
). The major polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and phosphatidylinositol. The major fatty acids were C
, iso
C
and C
8
. The genomic DNA G+C content of strain NEAU-HV9
was 70.6 mol%. Furthermore, the strain could be clearly distinguished from its closely related type strains by the combination of DNA-DNA hybridization results and some phenotypic characteristics. Meanwhile, strain NEAU-HV9
displayed herbicidal activity. Therefore, strain NEAU-HV9
represents a novel species within the genus
, for which the name
sp. nov. is proposed, with strain NEAU-HV9
(=CCTCC AA 2019088
=DSM 113364
) as the type strain.</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijsem.0.006263</identifier><identifier>PMID: 38315525</identifier><language>eng</language><publisher>England</publisher><subject>Actinobacteria ; Bacterial Typing Techniques ; Base Composition ; China ; DNA, Bacterial - genetics ; Fatty Acids - chemistry ; Phospholipids - analysis ; Phylogeny ; RNA, Ribosomal, 16S - genetics ; Sequence Analysis, DNA ; Soil ; Soil Microbiology ; Streptomyces</subject><ispartof>International journal of systematic and evolutionary microbiology, 2024-02, Vol.74 (2)</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c250t-73cafbf86c7082fe0c704d89e346fc936d3ac716df5c4d695f80b604cfbea9703</cites><orcidid>0000-0003-1250-2756</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,3733,27903,27904</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38315525$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Luo, Yanfang</creatorcontrib><creatorcontrib>Ling, Ling</creatorcontrib><creatorcontrib>Zhang, Kun</creatorcontrib><creatorcontrib>Song, Zhengke</creatorcontrib><creatorcontrib>Zhang, Lida</creatorcontrib><creatorcontrib>Li, Jiaxin</creatorcontrib><creatorcontrib>Chen, Jie</creatorcontrib><creatorcontrib>Xiang, Wensheng</creatorcontrib><creatorcontrib>Wang, Xiangjing</creatorcontrib><creatorcontrib>Zhao, Junwei</creatorcontrib><title>Streptomyces herbicida sp. nov., a novel actinomycete with antibacterial and herbicidal activity isolated from soil</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>A novel actinobacterial strain (NEAU-HV9
) showing antibacterial activity against
and herbicidal activity against
L. was isolated from soil sampled in Bama yao Autonomous County, Hechi City, Guangxi Zhuang Autonomous Region. The strain is aerobic and Gram-positive. Phylogenetic analysis based on 16S rRNA gene sequence indicated that strain NEAU-HV9
belonged to the genus
and showed high 16S rRNA sequence similarity to
1MR-8
(98.90 %),
JR-39
(98.89 %) and
JA03
(98.69 %) and less than 98.5 % similarity to other members of the genus
. The cell wall of strain NEAU-HV9
contained ll-diaminopimelic acid and the whole-cell hydrolysates were galactose, mannose and ribose. The predominant menaquinones were composed of MK-9(H
) and MK-9(H
). The major polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and phosphatidylinositol. The major fatty acids were C
, iso
C
and C
8
. The genomic DNA G+C content of strain NEAU-HV9
was 70.6 mol%. Furthermore, the strain could be clearly distinguished from its closely related type strains by the combination of DNA-DNA hybridization results and some phenotypic characteristics. Meanwhile, strain NEAU-HV9
displayed herbicidal activity. Therefore, strain NEAU-HV9
represents a novel species within the genus
, for which the name
sp. nov. is proposed, with strain NEAU-HV9
(=CCTCC AA 2019088
=DSM 113364
) as the type strain.</description><subject>Actinobacteria</subject><subject>Bacterial Typing Techniques</subject><subject>Base Composition</subject><subject>China</subject><subject>DNA, Bacterial - genetics</subject><subject>Fatty Acids - chemistry</subject><subject>Phospholipids - analysis</subject><subject>Phylogeny</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Sequence Analysis, DNA</subject><subject>Soil</subject><subject>Soil Microbiology</subject><subject>Streptomyces</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpFkL1PwzAUxC0EoqWwMiKPDCS8xI6TjKjiS6rEAMyR4zyrrpK42G5R_3vSpsB0T_d-d8MRcp1AnEBZ3puVxy6GGECkgp2QacKFiDJg_PTvTsWEXHi_AhgMgHMyYQVLsizNpsS_B4frYLudQk-X6GqjTCOpX8e0t9v4jsq9YkulCqY_cAHptwlLKvtg6sFGZ-Tw75v__IhvTdhR420rAzZUO9tRb017Sc60bD1eHXVGPp8eP-Yv0eLt-XX-sIhUmkGIcqakrnUhVA5FqhEG5U1RIuNCq5KJhkmVJ6LRmeKNKDNdQC2AK12jLHNgM3I79q6d_dqgD1VnvMK2lT3aja_SMk3LDDgvBjQeUeWs9w51tXamk25XJVDth64OQ1dQjUMPgZtj96busPnDf5dlP6irfHQ</recordid><startdate>202402</startdate><enddate>202402</enddate><creator>Luo, Yanfang</creator><creator>Ling, Ling</creator><creator>Zhang, Kun</creator><creator>Song, Zhengke</creator><creator>Zhang, Lida</creator><creator>Li, Jiaxin</creator><creator>Chen, Jie</creator><creator>Xiang, Wensheng</creator><creator>Wang, Xiangjing</creator><creator>Zhao, Junwei</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0003-1250-2756</orcidid></search><sort><creationdate>202402</creationdate><title>Streptomyces herbicida sp. nov., a novel actinomycete with antibacterial and herbicidal activity isolated from soil</title><author>Luo, Yanfang ; Ling, Ling ; Zhang, Kun ; Song, Zhengke ; Zhang, Lida ; Li, Jiaxin ; Chen, Jie ; Xiang, Wensheng ; Wang, Xiangjing ; Zhao, Junwei</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c250t-73cafbf86c7082fe0c704d89e346fc936d3ac716df5c4d695f80b604cfbea9703</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Actinobacteria</topic><topic>Bacterial Typing Techniques</topic><topic>Base Composition</topic><topic>China</topic><topic>DNA, Bacterial - genetics</topic><topic>Fatty Acids - chemistry</topic><topic>Phospholipids - analysis</topic><topic>Phylogeny</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Sequence Analysis, DNA</topic><topic>Soil</topic><topic>Soil Microbiology</topic><topic>Streptomyces</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Luo, Yanfang</creatorcontrib><creatorcontrib>Ling, Ling</creatorcontrib><creatorcontrib>Zhang, Kun</creatorcontrib><creatorcontrib>Song, Zhengke</creatorcontrib><creatorcontrib>Zhang, Lida</creatorcontrib><creatorcontrib>Li, Jiaxin</creatorcontrib><creatorcontrib>Chen, Jie</creatorcontrib><creatorcontrib>Xiang, Wensheng</creatorcontrib><creatorcontrib>Wang, Xiangjing</creatorcontrib><creatorcontrib>Zhao, Junwei</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Luo, Yanfang</au><au>Ling, Ling</au><au>Zhang, Kun</au><au>Song, Zhengke</au><au>Zhang, Lida</au><au>Li, Jiaxin</au><au>Chen, Jie</au><au>Xiang, Wensheng</au><au>Wang, Xiangjing</au><au>Zhao, Junwei</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Streptomyces herbicida sp. nov., a novel actinomycete with antibacterial and herbicidal activity isolated from soil</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2024-02</date><risdate>2024</risdate><volume>74</volume><issue>2</issue><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>A novel actinobacterial strain (NEAU-HV9
) showing antibacterial activity against
and herbicidal activity against
L. was isolated from soil sampled in Bama yao Autonomous County, Hechi City, Guangxi Zhuang Autonomous Region. The strain is aerobic and Gram-positive. Phylogenetic analysis based on 16S rRNA gene sequence indicated that strain NEAU-HV9
belonged to the genus
and showed high 16S rRNA sequence similarity to
1MR-8
(98.90 %),
JR-39
(98.89 %) and
JA03
(98.69 %) and less than 98.5 % similarity to other members of the genus
. The cell wall of strain NEAU-HV9
contained ll-diaminopimelic acid and the whole-cell hydrolysates were galactose, mannose and ribose. The predominant menaquinones were composed of MK-9(H
) and MK-9(H
). The major polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and phosphatidylinositol. The major fatty acids were C
, iso
C
and C
8
. The genomic DNA G+C content of strain NEAU-HV9
was 70.6 mol%. Furthermore, the strain could be clearly distinguished from its closely related type strains by the combination of DNA-DNA hybridization results and some phenotypic characteristics. Meanwhile, strain NEAU-HV9
displayed herbicidal activity. Therefore, strain NEAU-HV9
represents a novel species within the genus
, for which the name
sp. nov. is proposed, with strain NEAU-HV9
(=CCTCC AA 2019088
=DSM 113364
) as the type strain.</abstract><cop>England</cop><pmid>38315525</pmid><doi>10.1099/ijsem.0.006263</doi><orcidid>https://orcid.org/0000-0003-1250-2756</orcidid></addata></record> |
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| source | MEDLINE; Microbiology Society; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals |
| subjects | Actinobacteria Bacterial Typing Techniques Base Composition China DNA, Bacterial - genetics Fatty Acids - chemistry Phospholipids - analysis Phylogeny RNA, Ribosomal, 16S - genetics Sequence Analysis, DNA Soil Soil Microbiology Streptomyces |
| title | Streptomyces herbicida sp. nov., a novel actinomycete with antibacterial and herbicidal activity isolated from soil |
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