A Solitary Stalled 80S Ribosome Prevents mRNA Recruitment to Stress Granules

In response to stress stimuli, eukaryotic cells typically suppress protein synthesis. This leads to the release of mRNAs from polysomes, their condensation with RNA-binding proteins, and the formation of non-membrane-bound cytoplasmic compartments called stress granules (SGs). SGs contain 40S but ge...

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Veröffentlicht in:Biochemistry (Moscow) 2023-11, Vol.88 (11), p.1786-1799
Hauptverfasser: Fedorovskiy, Artem G., Burakov, Anton V., Terenin, Ilya M., Bykov, Dmitry A., Lashkevich, Kseniya A., Popenko, Vladimir I., Makarova, Nadezhda E., Sorokin, Ivan I., Sukhinina, Anastasia P., Prassolov, Vladimir S., Ivanov, Pavel V., Dmitriev, Sergey E.
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container_end_page 1799
container_issue 11
container_start_page 1786
container_title Biochemistry (Moscow)
container_volume 88
creator Fedorovskiy, Artem G.
Burakov, Anton V.
Terenin, Ilya M.
Bykov, Dmitry A.
Lashkevich, Kseniya A.
Popenko, Vladimir I.
Makarova, Nadezhda E.
Sorokin, Ivan I.
Sukhinina, Anastasia P.
Prassolov, Vladimir S.
Ivanov, Pavel V.
Dmitriev, Sergey E.
description In response to stress stimuli, eukaryotic cells typically suppress protein synthesis. This leads to the release of mRNAs from polysomes, their condensation with RNA-binding proteins, and the formation of non-membrane-bound cytoplasmic compartments called stress granules (SGs). SGs contain 40S but generally lack 60S ribosomal subunits. It is known that cycloheximide, emetine, and anisomycin, the ribosome inhibitors that block the progression of 80S ribosomes along mRNA and stabilize polysomes, prevent SG assembly. Conversely, puromycin, which induces premature termination, releases mRNA from polysomes and stimulates the formation of SGs. The same effect is caused by some translation initiation inhibitors, which lead to polysome disassembly and the accumulation of mRNAs in the form of stalled 48S preinitiation complexes. Based on these and other data, it is believed that the trigger for SG formation is the presence of mRNA with extended ribosome-free segments, which tend to form condensates in the cell. In this study, we evaluated the ability of various small-molecule translation inhibitors to block or stimulate the assembly of SGs under conditions of severe oxidative stress induced by sodium arsenite. Contrary to expectations, we found that ribosome-targeting elongation inhibitors of a specific type, which arrest solitary 80S ribosomes at the beginning of the mRNA coding regions but do not interfere with all subsequent ribosomes in completing translation and leaving the transcripts (such as harringtonine, lactimidomycin, or T-2 toxin), completely prevent the formation of arsenite-induced SGs. These observations suggest that the presence of even a single 80S ribosome on mRNA is sufficient to prevent its recruitment into SGs, and the presence of extended ribosome-free regions of mRNA is not sufficient for SG formation. We propose that mRNA entry into SGs may be mediated by specific contacts between RNA-binding proteins and those regions on 40S subunits that remain inaccessible when ribosomes are associated.
doi_str_mv 10.1134/S000629792311010X
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This leads to the release of mRNAs from polysomes, their condensation with RNA-binding proteins, and the formation of non-membrane-bound cytoplasmic compartments called stress granules (SGs). SGs contain 40S but generally lack 60S ribosomal subunits. It is known that cycloheximide, emetine, and anisomycin, the ribosome inhibitors that block the progression of 80S ribosomes along mRNA and stabilize polysomes, prevent SG assembly. Conversely, puromycin, which induces premature termination, releases mRNA from polysomes and stimulates the formation of SGs. The same effect is caused by some translation initiation inhibitors, which lead to polysome disassembly and the accumulation of mRNAs in the form of stalled 48S preinitiation complexes. Based on these and other data, it is believed that the trigger for SG formation is the presence of mRNA with extended ribosome-free segments, which tend to form condensates in the cell. 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subjects Anisomycin
Arsenite
Binding
Biochemistry
Biomedical and Life Sciences
Biomedicine
Bioorganic Chemistry
Cycloheximide
Cytoplasmic Granules
Elongation
Emetine
Genetic aspects
Granular materials
Health aspects
Inhibitors
Life Sciences
Messenger RNA
Microbiology
mRNA
Oxidative stress
Polyribosomes
Protein Biosynthesis
Protein synthesis
Protein Synthesis Inhibitors - pharmacology
Proteins
Puromycin
Ribonucleic acid
Ribosomal subunits
Ribosomes
Ribosomes - metabolism
RNA
RNA, Messenger - metabolism
RNA-binding protein
RNA-Binding Proteins - metabolism
Sodium arsenite
Stress (Physiology)
Stress Granules
Stress response
Toxins
Translation initiation
title A Solitary Stalled 80S Ribosome Prevents mRNA Recruitment to Stress Granules
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