The dual‐action mechanism of Arabidopsis cryptochromes
ABSTRACT Photoreceptor cryptochromes (CRYs) mediate blue‐light regulation of plant growth and development. It has been reported that Arabidopsis CRY1and CRY2 function by physically interacting with at least 84 proteins, including transcription factors or co‐factors, chromatin regulators, splicing fa...
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Veröffentlicht in: | Journal of integrative plant biology 2024-05, Vol.66 (5), p.883-896 |
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Photoreceptor cryptochromes (CRYs) mediate blue‐light regulation of plant growth and development. It has been reported that Arabidopsis CRY1and CRY2 function by physically interacting with at least 84 proteins, including transcription factors or co‐factors, chromatin regulators, splicing factors, messenger RNA methyltransferases, DNA repair proteins, E3 ubiquitin ligases, protein kinases and so on. Of these 84 proteins, 47 have been reported to exhibit altered binding affinity to CRYs in response to blue light, and 41 have been shown to exhibit condensation to CRY photobodies. The blue light‐regulated composition or condensation of CRY complexes results in changes of gene expression and developmental programs. In this mini‐review, we analyzed recent studies of the photoregulatory mechanisms of Arabidopsis CRY complexes and proposed the dual mechanisms of action, including the “Lock‐and‐Key” and the “Liquid‐Liquid Phase Separation (LLPS)” mechanisms. The dual CRY action mechanisms explain, at least partially, the structural diversity of CRY‐interacting proteins and the functional diversity of the CRY photoreceptors.
This mini‐review summarizes 84 reported cryptochrome‐interacting proteins and their main signal transduction networks, and proposes two mechanisms for cryptochrome action. In the Lock‐and‐Key mechanism, blue light‐induces a change in binding activity between cryptochromes and cryptochrome‐interacting proteins; the LLPS mechanism involves blue‐light‐induced co‐condensation of cryptochromes and cryptochrome‐interacting proteins. |
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Photoreceptor cryptochromes (CRYs) mediate blue‐light regulation of plant growth and development. It has been reported that Arabidopsis CRY1and CRY2 function by physically interacting with at least 84 proteins, including transcription factors or co‐factors, chromatin regulators, splicing factors, messenger RNA methyltransferases, DNA repair proteins, E3 ubiquitin ligases, protein kinases and so on. Of these 84 proteins, 47 have been reported to exhibit altered binding affinity to CRYs in response to blue light, and 41 have been shown to exhibit condensation to CRY photobodies. The blue light‐regulated composition or condensation of CRY complexes results in changes of gene expression and developmental programs. In this mini‐review, we analyzed recent studies of the photoregulatory mechanisms of Arabidopsis CRY complexes and proposed the dual mechanisms of action, including the “Lock‐and‐Key” and the “Liquid‐Liquid Phase Separation (LLPS)” mechanisms. The dual CRY action mechanisms explain, at least partially, the structural diversity of CRY‐interacting proteins and the functional diversity of the CRY photoreceptors.
This mini‐review summarizes 84 reported cryptochrome‐interacting proteins and their main signal transduction networks, and proposes two mechanisms for cryptochrome action. In the Lock‐and‐Key mechanism, blue light‐induces a change in binding activity between cryptochromes and cryptochrome‐interacting proteins; the LLPS mechanism involves blue‐light‐induced co‐condensation of cryptochromes and cryptochrome‐interacting proteins.</description><identifier>ISSN: 1672-9072</identifier><identifier>EISSN: 1744-7909</identifier><identifier>DOI: 10.1111/jipb.13578</identifier><identifier>PMID: 37902426</identifier><language>eng</language><publisher>China (Republic : 1949- ): Wiley Subscription Services, Inc</publisher><subject>Arabidopsis ; blue light ; Chromatin ; CRY1 ; CRY2 ; cryptochrome ; Cryptochromes ; DNA repair ; Gene expression ; Kinases ; Liquid phases ; mRNA ; Phase separation ; Photoreceptors ; Plant growth ; Proteins ; Splicing factors ; Transcription factors ; Ubiquitin</subject><ispartof>Journal of integrative plant biology, 2024-05, Vol.66 (5), p.883-896</ispartof><rights>2023 The Authors. published by John Wiley & Sons Australia, Ltd on behalf of Institute of Botany, Chinese Academy of Sciences.</rights><rights>2023 The Authors. Journal of Integrative Plant Biology published by John Wiley & Sons Australia, Ltd on behalf of Institute of Botany, Chinese Academy of Sciences.</rights><rights>2023. This article is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3938-170c73a8b22984840fd17ca3f80085a5f27835edf4cdb953ac4e4881bfc64e003</citedby><cites>FETCH-LOGICAL-c3938-170c73a8b22984840fd17ca3f80085a5f27835edf4cdb953ac4e4881bfc64e003</cites><orcidid>0000-0001-6686-8847 ; 0000-0003-3853-9266 ; 0000-0002-0004-8480</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fjipb.13578$$EPDF$$P50$$Gwiley$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fjipb.13578$$EHTML$$P50$$Gwiley$$Hfree_for_read</linktohtml><link.rule.ids>314,780,784,1417,27924,27925,45574,45575</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/37902426$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Qu, Gao‐Ping</creatorcontrib><creatorcontrib>Jiang, Bochen</creatorcontrib><creatorcontrib>Lin, Chentao</creatorcontrib><title>The dual‐action mechanism of Arabidopsis cryptochromes</title><title>Journal of integrative plant biology</title><addtitle>J Integr Plant Biol</addtitle><description>ABSTRACT
Photoreceptor cryptochromes (CRYs) mediate blue‐light regulation of plant growth and development. It has been reported that Arabidopsis CRY1and CRY2 function by physically interacting with at least 84 proteins, including transcription factors or co‐factors, chromatin regulators, splicing factors, messenger RNA methyltransferases, DNA repair proteins, E3 ubiquitin ligases, protein kinases and so on. Of these 84 proteins, 47 have been reported to exhibit altered binding affinity to CRYs in response to blue light, and 41 have been shown to exhibit condensation to CRY photobodies. The blue light‐regulated composition or condensation of CRY complexes results in changes of gene expression and developmental programs. In this mini‐review, we analyzed recent studies of the photoregulatory mechanisms of Arabidopsis CRY complexes and proposed the dual mechanisms of action, including the “Lock‐and‐Key” and the “Liquid‐Liquid Phase Separation (LLPS)” mechanisms. The dual CRY action mechanisms explain, at least partially, the structural diversity of CRY‐interacting proteins and the functional diversity of the CRY photoreceptors.
This mini‐review summarizes 84 reported cryptochrome‐interacting proteins and their main signal transduction networks, and proposes two mechanisms for cryptochrome action. In the Lock‐and‐Key mechanism, blue light‐induces a change in binding activity between cryptochromes and cryptochrome‐interacting proteins; the LLPS mechanism involves blue‐light‐induced co‐condensation of cryptochromes and cryptochrome‐interacting proteins.</description><subject>Arabidopsis</subject><subject>blue light</subject><subject>Chromatin</subject><subject>CRY1</subject><subject>CRY2</subject><subject>cryptochrome</subject><subject>Cryptochromes</subject><subject>DNA repair</subject><subject>Gene expression</subject><subject>Kinases</subject><subject>Liquid phases</subject><subject>mRNA</subject><subject>Phase separation</subject><subject>Photoreceptors</subject><subject>Plant growth</subject><subject>Proteins</subject><subject>Splicing factors</subject><subject>Transcription factors</subject><subject>Ubiquitin</subject><issn>1672-9072</issn><issn>1744-7909</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>24P</sourceid><sourceid>WIN</sourceid><recordid>eNp90LtOwzAUBmALgWgpLDwAisSCkAK-JT4ZS8WlqBIMZbYcx1FTJXWwG6FuPALPyJPgksLAgJfj4dOvc36ETgm-IuFdL6s2vyIsEbCHhkRwHosMZ_vhnwoaZ1jQATryfokxA5zSQzRgAVBO0yGC-cJERafqz_cPpdeVXUWN0Qu1qnwT2TIaO5VXhW195SPtNu3a6oWzjfHH6KBUtTcnuzlCL3e388lDPHu6n07Gs1izjEFMBNaCKcgpzYADx2VBhFasBIwhUUlJBbDEFCXXRZ4lTGluOADJS51yEzYeoYs-t3X2tTN-LZvKa1PXamVs5yUF4AS4AAj0_A9d2s6twnaS4TQcn1K-VZe90s5670wpW1c1ym0kwXLbp9z2Kb_7DPhsF9nljSl-6U-BAZAevFW12fwTJR-nzzd96BfamH9i</recordid><startdate>202405</startdate><enddate>202405</enddate><creator>Qu, Gao‐Ping</creator><creator>Jiang, Bochen</creator><creator>Lin, Chentao</creator><general>Wiley Subscription Services, Inc</general><scope>24P</scope><scope>WIN</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7T7</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0001-6686-8847</orcidid><orcidid>https://orcid.org/0000-0003-3853-9266</orcidid><orcidid>https://orcid.org/0000-0002-0004-8480</orcidid></search><sort><creationdate>202405</creationdate><title>The dual‐action mechanism of Arabidopsis cryptochromes</title><author>Qu, Gao‐Ping ; Jiang, Bochen ; Lin, Chentao</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3938-170c73a8b22984840fd17ca3f80085a5f27835edf4cdb953ac4e4881bfc64e003</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Arabidopsis</topic><topic>blue light</topic><topic>Chromatin</topic><topic>CRY1</topic><topic>CRY2</topic><topic>cryptochrome</topic><topic>Cryptochromes</topic><topic>DNA repair</topic><topic>Gene expression</topic><topic>Kinases</topic><topic>Liquid phases</topic><topic>mRNA</topic><topic>Phase separation</topic><topic>Photoreceptors</topic><topic>Plant growth</topic><topic>Proteins</topic><topic>Splicing factors</topic><topic>Transcription factors</topic><topic>Ubiquitin</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Qu, Gao‐Ping</creatorcontrib><creatorcontrib>Jiang, Bochen</creatorcontrib><creatorcontrib>Lin, Chentao</creatorcontrib><collection>Wiley Online Library Open Access</collection><collection>Wiley Online Library Free Content</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of integrative plant biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Qu, Gao‐Ping</au><au>Jiang, Bochen</au><au>Lin, Chentao</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The dual‐action mechanism of Arabidopsis cryptochromes</atitle><jtitle>Journal of integrative plant biology</jtitle><addtitle>J Integr Plant Biol</addtitle><date>2024-05</date><risdate>2024</risdate><volume>66</volume><issue>5</issue><spage>883</spage><epage>896</epage><pages>883-896</pages><issn>1672-9072</issn><eissn>1744-7909</eissn><abstract>ABSTRACT
Photoreceptor cryptochromes (CRYs) mediate blue‐light regulation of plant growth and development. It has been reported that Arabidopsis CRY1and CRY2 function by physically interacting with at least 84 proteins, including transcription factors or co‐factors, chromatin regulators, splicing factors, messenger RNA methyltransferases, DNA repair proteins, E3 ubiquitin ligases, protein kinases and so on. Of these 84 proteins, 47 have been reported to exhibit altered binding affinity to CRYs in response to blue light, and 41 have been shown to exhibit condensation to CRY photobodies. The blue light‐regulated composition or condensation of CRY complexes results in changes of gene expression and developmental programs. In this mini‐review, we analyzed recent studies of the photoregulatory mechanisms of Arabidopsis CRY complexes and proposed the dual mechanisms of action, including the “Lock‐and‐Key” and the “Liquid‐Liquid Phase Separation (LLPS)” mechanisms. The dual CRY action mechanisms explain, at least partially, the structural diversity of CRY‐interacting proteins and the functional diversity of the CRY photoreceptors.
This mini‐review summarizes 84 reported cryptochrome‐interacting proteins and their main signal transduction networks, and proposes two mechanisms for cryptochrome action. In the Lock‐and‐Key mechanism, blue light‐induces a change in binding activity between cryptochromes and cryptochrome‐interacting proteins; the LLPS mechanism involves blue‐light‐induced co‐condensation of cryptochromes and cryptochrome‐interacting proteins.</abstract><cop>China (Republic : 1949- )</cop><pub>Wiley Subscription Services, Inc</pub><pmid>37902426</pmid><doi>10.1111/jipb.13578</doi><tpages>14</tpages><orcidid>https://orcid.org/0000-0001-6686-8847</orcidid><orcidid>https://orcid.org/0000-0003-3853-9266</orcidid><orcidid>https://orcid.org/0000-0002-0004-8480</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Arabidopsis blue light Chromatin CRY1 CRY2 cryptochrome Cryptochromes DNA repair Gene expression Kinases Liquid phases mRNA Phase separation Photoreceptors Plant growth Proteins Splicing factors Transcription factors Ubiquitin |
title | The dual‐action mechanism of Arabidopsis cryptochromes |
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