Topology-sensitive weighting model for myocardial segmentation
Accurate myocardial segmentation is crucial for the diagnosis of various heart diseases. However, segmentation results often suffer from topology structural errors, such as broken connections and holes, especially in cases of poor image quality. These errors are unacceptable in clinical diagnosis. W...
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Veröffentlicht in: | Computers in biology and medicine 2023-10, Vol.165, p.107286-107286, Article 107286 |
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creator | Sun, Song Wang, Yonghuai Yang, Jinzhu Feng, Yong Tang, Lingzhi Liu, Shuo Ning, Hongxia |
description | Accurate myocardial segmentation is crucial for the diagnosis of various heart diseases. However, segmentation results often suffer from topology structural errors, such as broken connections and holes, especially in cases of poor image quality. These errors are unacceptable in clinical diagnosis. We proposed a Topology-Sensitive Weight (TSW) model to keep both pixel-wise accuracy and topological correctness. Specifically, the Position Weighting Update (PWU) strategy with the Boundary-Sensitive Topology (BST) module can guide the model to focus on positions where topological features are sensitive to pixel values. The Myocardial Integrity Topology (MIT) module can serve as a guide for maintaining myocardial integrity. We evaluate the TSW model on the CAMUS dataset and a private echocardiography myocardial segmentation dataset. The qualitative and quantitative experimental results show that the TSW model significantly enhances topological accuracy while maintaining pixel-wise precision.
•The TSW model can maintain both pixel-wise accuracy and topological correctness.•The PWU strategy and BST module can focus on pixels prone to change.•The MIT module can effectively keep myocardial integrity.•The TSW model is validated on two datasets. The TWS can improve topology correctness. |
doi_str_mv | 10.1016/j.compbiomed.2023.107286 |
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•The TSW model can maintain both pixel-wise accuracy and topological correctness.•The PWU strategy and BST module can focus on pixels prone to change.•The MIT module can effectively keep myocardial integrity.•The TSW model is validated on two datasets. The TWS can improve topology correctness.</description><identifier>ISSN: 0010-4825</identifier><identifier>EISSN: 1879-0534</identifier><identifier>DOI: 10.1016/j.compbiomed.2023.107286</identifier><language>eng</language><publisher>Oxford: Elsevier Ltd</publisher><subject>Accuracy ; Biology ; Cardiovascular diseases ; Computers ; Datasets ; Diagnosis ; Echocardiography ; Errors ; Heart diseases ; Image quality ; Image segmentation ; Integrity ; Modules ; Myocardial Segmentation ; Persistent Homology ; Pixels ; Semantics ; Skin cancer ; Topology ; Weighting</subject><ispartof>Computers in biology and medicine, 2023-10, Vol.165, p.107286-107286, Article 107286</ispartof><rights>2023 The Author(s)</rights><rights>2023. The Author(s)</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c374t-76bbaa2e3e8a8b8f84101628cb01cb740daa2a9910b0e354dac90be0b899f1e13</cites><orcidid>0000-0002-7754-1273 ; 0009-0000-0055-9240</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0010482523007515$$EHTML$$P50$$Gelsevier$$Hfree_for_read</linktohtml><link.rule.ids>314,776,780,3536,27903,27904,65309</link.rule.ids></links><search><creatorcontrib>Sun, Song</creatorcontrib><creatorcontrib>Wang, Yonghuai</creatorcontrib><creatorcontrib>Yang, Jinzhu</creatorcontrib><creatorcontrib>Feng, Yong</creatorcontrib><creatorcontrib>Tang, Lingzhi</creatorcontrib><creatorcontrib>Liu, Shuo</creatorcontrib><creatorcontrib>Ning, Hongxia</creatorcontrib><title>Topology-sensitive weighting model for myocardial segmentation</title><title>Computers in biology and medicine</title><description>Accurate myocardial segmentation is crucial for the diagnosis of various heart diseases. However, segmentation results often suffer from topology structural errors, such as broken connections and holes, especially in cases of poor image quality. These errors are unacceptable in clinical diagnosis. We proposed a Topology-Sensitive Weight (TSW) model to keep both pixel-wise accuracy and topological correctness. Specifically, the Position Weighting Update (PWU) strategy with the Boundary-Sensitive Topology (BST) module can guide the model to focus on positions where topological features are sensitive to pixel values. The Myocardial Integrity Topology (MIT) module can serve as a guide for maintaining myocardial integrity. We evaluate the TSW model on the CAMUS dataset and a private echocardiography myocardial segmentation dataset. The qualitative and quantitative experimental results show that the TSW model significantly enhances topological accuracy while maintaining pixel-wise precision.
•The TSW model can maintain both pixel-wise accuracy and topological correctness.•The PWU strategy and BST module can focus on pixels prone to change.•The MIT module can effectively keep myocardial integrity.•The TSW model is validated on two datasets. The TWS can improve topology correctness.</description><subject>Accuracy</subject><subject>Biology</subject><subject>Cardiovascular diseases</subject><subject>Computers</subject><subject>Datasets</subject><subject>Diagnosis</subject><subject>Echocardiography</subject><subject>Errors</subject><subject>Heart diseases</subject><subject>Image quality</subject><subject>Image segmentation</subject><subject>Integrity</subject><subject>Modules</subject><subject>Myocardial Segmentation</subject><subject>Persistent Homology</subject><subject>Pixels</subject><subject>Semantics</subject><subject>Skin 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segmentation</atitle><jtitle>Computers in biology and medicine</jtitle><date>2023-10</date><risdate>2023</risdate><volume>165</volume><spage>107286</spage><epage>107286</epage><pages>107286-107286</pages><artnum>107286</artnum><issn>0010-4825</issn><eissn>1879-0534</eissn><abstract>Accurate myocardial segmentation is crucial for the diagnosis of various heart diseases. However, segmentation results often suffer from topology structural errors, such as broken connections and holes, especially in cases of poor image quality. These errors are unacceptable in clinical diagnosis. We proposed a Topology-Sensitive Weight (TSW) model to keep both pixel-wise accuracy and topological correctness. Specifically, the Position Weighting Update (PWU) strategy with the Boundary-Sensitive Topology (BST) module can guide the model to focus on positions where topological features are sensitive to pixel values. The Myocardial Integrity Topology (MIT) module can serve as a guide for maintaining myocardial integrity. We evaluate the TSW model on the CAMUS dataset and a private echocardiography myocardial segmentation dataset. The qualitative and quantitative experimental results show that the TSW model significantly enhances topological accuracy while maintaining pixel-wise precision.
•The TSW model can maintain both pixel-wise accuracy and topological correctness.•The PWU strategy and BST module can focus on pixels prone to change.•The MIT module can effectively keep myocardial integrity.•The TSW model is validated on two datasets. The TWS can improve topology correctness.</abstract><cop>Oxford</cop><pub>Elsevier Ltd</pub><doi>10.1016/j.compbiomed.2023.107286</doi><tpages>1</tpages><orcidid>https://orcid.org/0000-0002-7754-1273</orcidid><orcidid>https://orcid.org/0009-0000-0055-9240</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Accuracy Biology Cardiovascular diseases Computers Datasets Diagnosis Echocardiography Errors Heart diseases Image quality Image segmentation Integrity Modules Myocardial Segmentation Persistent Homology Pixels Semantics Skin cancer Topology Weighting |
title | Topology-sensitive weighting model for myocardial segmentation |
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