Optimization of machine learning classification models for tumor cells based on cell elements heterogeneity with laser-induced breakdown spectroscopy
The rapid and accurate diagnosis of cancer is an important topic in clinical medicine. In the present work, an innovative method based on laser-induced breakdown spectroscopy (LIBS) combined with machine learning was developed to distinguish and classify different tumor cell lines. The LIBS spectra...
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Veröffentlicht in: | Journal of biophotonics 2023-11, Vol.16 (11), p.e202300239-e202300239 |
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creator | Wang, Yimeng Huang, Da Shu, Kaiqiang Xu, Yingtong Duan, Yixiang Fan, Qingwen Lin, Qingyu Tuchin, Valery V |
description | The rapid and accurate diagnosis of cancer is an important topic in clinical medicine. In the present work, an innovative method based on laser-induced breakdown spectroscopy (LIBS) combined with machine learning was developed to distinguish and classify different tumor cell lines. The LIBS spectra of cells were first acquired. Then the spectral pre-processing was performed as well as detailed optimization to improve the classification accuracy. After that, the convolutional neural network (CNN), support vector machine (SVM), and K-nearest neighbors were further compared for the optimized classification ability of tumor cells. Both the CNN algorithm and SVM algorithm have achieved impressive discrimination performances for tumor cells distinguishing, with an accuracy of 97.72%. The results show that the heterogeneity of elements in tumor cells plays an important role in distinguishing the cells. It also means that the LIBS technique can be used as a fast classification method for classifying tumor cells. |
doi_str_mv | 10.1002/jbio.202300239 |
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In the present work, an innovative method based on laser-induced breakdown spectroscopy (LIBS) combined with machine learning was developed to distinguish and classify different tumor cell lines. The LIBS spectra of cells were first acquired. Then the spectral pre-processing was performed as well as detailed optimization to improve the classification accuracy. After that, the convolutional neural network (CNN), support vector machine (SVM), and K-nearest neighbors were further compared for the optimized classification ability of tumor cells. Both the CNN algorithm and SVM algorithm have achieved impressive discrimination performances for tumor cells distinguishing, with an accuracy of 97.72%. The results show that the heterogeneity of elements in tumor cells plays an important role in distinguishing the cells. It also means that the LIBS technique can be used as a fast classification method for classifying tumor cells.</description><identifier>ISSN: 1864-063X</identifier><identifier>EISSN: 1864-0648</identifier><identifier>DOI: 10.1002/jbio.202300239</identifier><identifier>PMID: 37515457</identifier><language>eng</language><publisher>Germany: Wiley Subscription Services, Inc</publisher><subject>Algorithms ; Artificial neural networks ; Breakdown ; Cell culture ; Classification ; Clinical medicine ; Heterogeneity ; Learning algorithms ; Line spectra ; Machine learning ; Neural networks ; Optimization ; Spectroscopy ; Support vector machines ; Tumor cell lines ; Tumor cells ; Tumors</subject><ispartof>Journal of biophotonics, 2023-11, Vol.16 (11), p.e202300239-e202300239</ispartof><rights>2023 Wiley-VCH GmbH.</rights><rights>2023 Wiley‐VCH GmbH</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c323t-b0aa551503e492610edbbcbfc88a0d9ec3d3af3cbb8a4738845c1f2f99f06f693</citedby><cites>FETCH-LOGICAL-c323t-b0aa551503e492610edbbcbfc88a0d9ec3d3af3cbb8a4738845c1f2f99f06f693</cites><orcidid>0000-0001-9631-5880 ; 0000-0001-7479-2694</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27903,27904</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/37515457$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Wang, Yimeng</creatorcontrib><creatorcontrib>Huang, Da</creatorcontrib><creatorcontrib>Shu, Kaiqiang</creatorcontrib><creatorcontrib>Xu, Yingtong</creatorcontrib><creatorcontrib>Duan, Yixiang</creatorcontrib><creatorcontrib>Fan, Qingwen</creatorcontrib><creatorcontrib>Lin, Qingyu</creatorcontrib><creatorcontrib>Tuchin, Valery V</creatorcontrib><title>Optimization of machine learning classification models for tumor cells based on cell elements heterogeneity with laser-induced breakdown spectroscopy</title><title>Journal of biophotonics</title><addtitle>J Biophotonics</addtitle><description>The rapid and accurate diagnosis of cancer is an important topic in clinical medicine. In the present work, an innovative method based on laser-induced breakdown spectroscopy (LIBS) combined with machine learning was developed to distinguish and classify different tumor cell lines. The LIBS spectra of cells were first acquired. Then the spectral pre-processing was performed as well as detailed optimization to improve the classification accuracy. After that, the convolutional neural network (CNN), support vector machine (SVM), and K-nearest neighbors were further compared for the optimized classification ability of tumor cells. Both the CNN algorithm and SVM algorithm have achieved impressive discrimination performances for tumor cells distinguishing, with an accuracy of 97.72%. The results show that the heterogeneity of elements in tumor cells plays an important role in distinguishing the cells. It also means that the LIBS technique can be used as a fast classification method for classifying tumor cells.</description><subject>Algorithms</subject><subject>Artificial neural networks</subject><subject>Breakdown</subject><subject>Cell culture</subject><subject>Classification</subject><subject>Clinical medicine</subject><subject>Heterogeneity</subject><subject>Learning algorithms</subject><subject>Line spectra</subject><subject>Machine learning</subject><subject>Neural networks</subject><subject>Optimization</subject><subject>Spectroscopy</subject><subject>Support vector machines</subject><subject>Tumor cell lines</subject><subject>Tumor cells</subject><subject>Tumors</subject><issn>1864-063X</issn><issn>1864-0648</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><recordid>eNpdkUtLxDAUhYMovrcuJeDGTcc0aTvpUsQXCG4U3JUkvXEytklNUobxf_h_TRmdhZskh3z3cA8HobOczHJC6NVSGjejhLIkWL2DDnNeFRmpCr67fbO3A3QUwpKQirCS7aMDNi_zsijnh-j7eYimN18iGmex07gXamEs4A6Et8a-Y9WJEIw2aoP0roUuYO08jmOfTgVd0lIEaHH6nySGDnqwMeAFRPDuHSyYuMYrExc42YHPjG1HlSakB_HRupXFYQAVvQvKDesTtKdFF-D09z5Gr3e3LzcP2dPz_ePN9VOmGGUxk0SIMiUhDIqaVjmBVkolteJckLYGxVomNFNSclHMGedFqXJNdV1rUumqZsfocuM7ePc5QohNb8KUQFhwY2goLzildV5M6MU_dOlGb9N2ieIlq6YFEjXbUColCR50M3jTC79uctJMhTVTYc22sDRw_ms7yh7aLf7XEPsBaLOV0A</recordid><startdate>20231101</startdate><enddate>20231101</enddate><creator>Wang, Yimeng</creator><creator>Huang, Da</creator><creator>Shu, Kaiqiang</creator><creator>Xu, Yingtong</creator><creator>Duan, Yixiang</creator><creator>Fan, Qingwen</creator><creator>Lin, Qingyu</creator><creator>Tuchin, Valery V</creator><general>Wiley Subscription Services, Inc</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7SP</scope><scope>7SR</scope><scope>7U5</scope><scope>8FD</scope><scope>FR3</scope><scope>JG9</scope><scope>K9.</scope><scope>L7M</scope><scope>P64</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0001-9631-5880</orcidid><orcidid>https://orcid.org/0000-0001-7479-2694</orcidid></search><sort><creationdate>20231101</creationdate><title>Optimization of machine learning classification models for tumor cells based on cell elements heterogeneity with laser-induced breakdown spectroscopy</title><author>Wang, Yimeng ; 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In the present work, an innovative method based on laser-induced breakdown spectroscopy (LIBS) combined with machine learning was developed to distinguish and classify different tumor cell lines. The LIBS spectra of cells were first acquired. Then the spectral pre-processing was performed as well as detailed optimization to improve the classification accuracy. After that, the convolutional neural network (CNN), support vector machine (SVM), and K-nearest neighbors were further compared for the optimized classification ability of tumor cells. Both the CNN algorithm and SVM algorithm have achieved impressive discrimination performances for tumor cells distinguishing, with an accuracy of 97.72%. The results show that the heterogeneity of elements in tumor cells plays an important role in distinguishing the cells. 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subjects | Algorithms Artificial neural networks Breakdown Cell culture Classification Clinical medicine Heterogeneity Learning algorithms Line spectra Machine learning Neural networks Optimization Spectroscopy Support vector machines Tumor cell lines Tumor cells Tumors |
title | Optimization of machine learning classification models for tumor cells based on cell elements heterogeneity with laser-induced breakdown spectroscopy |
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