It's all relative: analyzing microbiome compositions, its significance, pathogenesis and microbiota derived biofilms: Challenges and opportunities for disease intervention

Concept of microorganisms has largely been perceived from their pathogenic view point. Nevertheless, it is being gradually revisited in terms of its significance to human health and now appears to be the most dominant force that shapes the immune system of the human body and also determines an indiv...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Archives of microbiology 2023-07, Vol.205 (7), p.257-257, Article 257
Hauptverfasser: Zaidi, Sahar, Ali, Khursheed, Khan, Asad U.
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 257
container_issue 7
container_start_page 257
container_title Archives of microbiology
container_volume 205
creator Zaidi, Sahar
Ali, Khursheed
Khan, Asad U.
description Concept of microorganisms has largely been perceived from their pathogenic view point. Nevertheless, it is being gradually revisited in terms of its significance to human health and now appears to be the most dominant force that shapes the immune system of the human body and also determines an individual’s predisposition to diseases. Human inhabits bacterial diversity (which is predominant among all microbial communities in human body) occupying 0.3% of body mass, known as microbiota. On birth, a part of microbiota that child obtains is essentially a mother’s legacy. So, the review was initiated with this critical topic of microbiotal inheritance. Since, each body site has distinct physiological specifications; therefore, they contain discrete microbiome composition that has been separately discussed along with dysbiosis-induced pathologies originating in different body organs. Factors affecting microbiome composition and may cause dysbiosis like antibiotics, delivery, feeding method etc. as well as the strategies that immune system adopts to prevent dysbiosis have been highlighted. We also tried to bring into attention the topic of dysbiosis induced biofilms, that enables cohort to survive stresses, evolve, disseminate and infection resurgence that is still in dormancy. Eventually, we put spotlight on microbiome significance in medical therapeutics. We didn’t merely confine article to gut microbiota, that is being studied more extensively. Numerous community forms at diverse body sites are inter-related, and being exposed to awfully variable perturbations appear to be challenging to evaluate perturbation risks holistically. All aspects have been elaborately discussed to achieve a global depiction of human microbiota in order to meet urgent necessity for protocol standardisation. Graphical abstract Demonstrates that environmental challenges (antibiotic use, alterations in diet, stress, smoking etc.) might cause dysbiosis i.e. transition of healthy microbiome composition to the one in which pathogenic microorganisms become more abundant, and eventually results in an infected state.
doi_str_mv 10.1007/s00203-023-03589-7
format Article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_2823495153</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2823495153</sourcerecordid><originalsourceid>FETCH-LOGICAL-c375t-dc548914d52530b06c35981a30f4a12bc2a7f3c9a60660d303e3a112491650133</originalsourceid><addsrcrecordid>eNp9kU9rFTEUxYMo9ln9Ai4k4EIXHb3JnT-Z7sqjaqHgRsHdkJe585oyk4xJplC_Ur-keZ1awYWLEHLzu-fAOYy9FvBBADQfI4AELEDmg5Vqi-YJ24gSZQGN_PGUbQBBFqpFPGIvYrwGEFIp9ZwdYSMVlCVu2N1Fehe5HkceaNTJ3tAp106Pt7-s2_PJmuB31k_EjZ9mH22y3sUTblPk0e6dHazRztAJn3W68ntyFG3Wc_3jbtK8p5CFe55fgx2neMq3V9mS3J5W1s-zD2lxWT5PBh94byPpSNy6ROGG3MH3JXs26DHSq4f7mH3_dP5t-6W4_Pr5Ynt2WRhsqlT0pipVK8q-khXCDmqDVauERhhKLeTOSN0MaFpdQ11Dj4CEWghZtqKuQCAes_er7hz8z4Vi6iYbDY2jduSX2EklsWwrUR3Qt_-g134JOb97SqqmgRIyJVcqJxJjoKGbg510uO0EdIcqu7XKLlfZ3VfZNXnpzYP0spuof1z5010GcAVi_spRhr_e_5H9Dbe8rB0</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2822877040</pqid></control><display><type>article</type><title>It's all relative: analyzing microbiome compositions, its significance, pathogenesis and microbiota derived biofilms: Challenges and opportunities for disease intervention</title><source>SpringerLink Journals - AutoHoldings</source><creator>Zaidi, Sahar ; Ali, Khursheed ; Khan, Asad U.</creator><creatorcontrib>Zaidi, Sahar ; Ali, Khursheed ; Khan, Asad U.</creatorcontrib><description>Concept of microorganisms has largely been perceived from their pathogenic view point. Nevertheless, it is being gradually revisited in terms of its significance to human health and now appears to be the most dominant force that shapes the immune system of the human body and also determines an individual’s predisposition to diseases. Human inhabits bacterial diversity (which is predominant among all microbial communities in human body) occupying 0.3% of body mass, known as microbiota. On birth, a part of microbiota that child obtains is essentially a mother’s legacy. So, the review was initiated with this critical topic of microbiotal inheritance. Since, each body site has distinct physiological specifications; therefore, they contain discrete microbiome composition that has been separately discussed along with dysbiosis-induced pathologies originating in different body organs. Factors affecting microbiome composition and may cause dysbiosis like antibiotics, delivery, feeding method etc. as well as the strategies that immune system adopts to prevent dysbiosis have been highlighted. We also tried to bring into attention the topic of dysbiosis induced biofilms, that enables cohort to survive stresses, evolve, disseminate and infection resurgence that is still in dormancy. Eventually, we put spotlight on microbiome significance in medical therapeutics. We didn’t merely confine article to gut microbiota, that is being studied more extensively. Numerous community forms at diverse body sites are inter-related, and being exposed to awfully variable perturbations appear to be challenging to evaluate perturbation risks holistically. All aspects have been elaborately discussed to achieve a global depiction of human microbiota in order to meet urgent necessity for protocol standardisation. Graphical abstract Demonstrates that environmental challenges (antibiotic use, alterations in diet, stress, smoking etc.) might cause dysbiosis i.e. transition of healthy microbiome composition to the one in which pathogenic microorganisms become more abundant, and eventually results in an infected state.</description><identifier>ISSN: 0302-8933</identifier><identifier>EISSN: 1432-072X</identifier><identifier>DOI: 10.1007/s00203-023-03589-7</identifier><identifier>PMID: 37280443</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Antibiotics ; Biochemistry ; Biofilms ; Biomedical and Life Sciences ; Biotechnology ; Body mass ; Cell Biology ; Composition ; Dormancy ; Dysbacteriosis ; Ecology ; Human body ; Immune system ; Intestinal microflora ; Life Sciences ; Microbial activity ; Microbial Ecology ; Microbiology ; Microbiomes ; Microbiota ; Microorganisms ; Mini Review ; Pathogenesis ; Perturbation</subject><ispartof>Archives of microbiology, 2023-07, Vol.205 (7), p.257-257, Article 257</ispartof><rights>The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature 2023. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.</rights><rights>2023. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c375t-dc548914d52530b06c35981a30f4a12bc2a7f3c9a60660d303e3a112491650133</citedby><cites>FETCH-LOGICAL-c375t-dc548914d52530b06c35981a30f4a12bc2a7f3c9a60660d303e3a112491650133</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00203-023-03589-7$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00203-023-03589-7$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>315,781,785,27929,27930,41493,42562,51324</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/37280443$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Zaidi, Sahar</creatorcontrib><creatorcontrib>Ali, Khursheed</creatorcontrib><creatorcontrib>Khan, Asad U.</creatorcontrib><title>It's all relative: analyzing microbiome compositions, its significance, pathogenesis and microbiota derived biofilms: Challenges and opportunities for disease intervention</title><title>Archives of microbiology</title><addtitle>Arch Microbiol</addtitle><addtitle>Arch Microbiol</addtitle><description>Concept of microorganisms has largely been perceived from their pathogenic view point. Nevertheless, it is being gradually revisited in terms of its significance to human health and now appears to be the most dominant force that shapes the immune system of the human body and also determines an individual’s predisposition to diseases. Human inhabits bacterial diversity (which is predominant among all microbial communities in human body) occupying 0.3% of body mass, known as microbiota. On birth, a part of microbiota that child obtains is essentially a mother’s legacy. So, the review was initiated with this critical topic of microbiotal inheritance. Since, each body site has distinct physiological specifications; therefore, they contain discrete microbiome composition that has been separately discussed along with dysbiosis-induced pathologies originating in different body organs. Factors affecting microbiome composition and may cause dysbiosis like antibiotics, delivery, feeding method etc. as well as the strategies that immune system adopts to prevent dysbiosis have been highlighted. We also tried to bring into attention the topic of dysbiosis induced biofilms, that enables cohort to survive stresses, evolve, disseminate and infection resurgence that is still in dormancy. Eventually, we put spotlight on microbiome significance in medical therapeutics. We didn’t merely confine article to gut microbiota, that is being studied more extensively. Numerous community forms at diverse body sites are inter-related, and being exposed to awfully variable perturbations appear to be challenging to evaluate perturbation risks holistically. All aspects have been elaborately discussed to achieve a global depiction of human microbiota in order to meet urgent necessity for protocol standardisation. Graphical abstract Demonstrates that environmental challenges (antibiotic use, alterations in diet, stress, smoking etc.) might cause dysbiosis i.e. transition of healthy microbiome composition to the one in which pathogenic microorganisms become more abundant, and eventually results in an infected state.</description><subject>Antibiotics</subject><subject>Biochemistry</subject><subject>Biofilms</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>Body mass</subject><subject>Cell Biology</subject><subject>Composition</subject><subject>Dormancy</subject><subject>Dysbacteriosis</subject><subject>Ecology</subject><subject>Human body</subject><subject>Immune system</subject><subject>Intestinal microflora</subject><subject>Life Sciences</subject><subject>Microbial activity</subject><subject>Microbial Ecology</subject><subject>Microbiology</subject><subject>Microbiomes</subject><subject>Microbiota</subject><subject>Microorganisms</subject><subject>Mini Review</subject><subject>Pathogenesis</subject><subject>Perturbation</subject><issn>0302-8933</issn><issn>1432-072X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp9kU9rFTEUxYMo9ln9Ai4k4EIXHb3JnT-Z7sqjaqHgRsHdkJe585oyk4xJplC_Ur-keZ1awYWLEHLzu-fAOYy9FvBBADQfI4AELEDmg5Vqi-YJ24gSZQGN_PGUbQBBFqpFPGIvYrwGEFIp9ZwdYSMVlCVu2N1Fehe5HkceaNTJ3tAp106Pt7-s2_PJmuB31k_EjZ9mH22y3sUTblPk0e6dHazRztAJn3W68ntyFG3Wc_3jbtK8p5CFe55fgx2neMq3V9mS3J5W1s-zD2lxWT5PBh94byPpSNy6ROGG3MH3JXs26DHSq4f7mH3_dP5t-6W4_Pr5Ynt2WRhsqlT0pipVK8q-khXCDmqDVauERhhKLeTOSN0MaFpdQ11Dj4CEWghZtqKuQCAes_er7hz8z4Vi6iYbDY2jduSX2EklsWwrUR3Qt_-g134JOb97SqqmgRIyJVcqJxJjoKGbg510uO0EdIcqu7XKLlfZ3VfZNXnpzYP0spuof1z5010GcAVi_spRhr_e_5H9Dbe8rB0</recordid><startdate>20230701</startdate><enddate>20230701</enddate><creator>Zaidi, Sahar</creator><creator>Ali, Khursheed</creator><creator>Khan, Asad U.</creator><general>Springer Berlin Heidelberg</general><general>Springer Nature B.V</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20230701</creationdate><title>It's all relative: analyzing microbiome compositions, its significance, pathogenesis and microbiota derived biofilms: Challenges and opportunities for disease intervention</title><author>Zaidi, Sahar ; Ali, Khursheed ; Khan, Asad U.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c375t-dc548914d52530b06c35981a30f4a12bc2a7f3c9a60660d303e3a112491650133</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Antibiotics</topic><topic>Biochemistry</topic><topic>Biofilms</topic><topic>Biomedical and Life Sciences</topic><topic>Biotechnology</topic><topic>Body mass</topic><topic>Cell Biology</topic><topic>Composition</topic><topic>Dormancy</topic><topic>Dysbacteriosis</topic><topic>Ecology</topic><topic>Human body</topic><topic>Immune system</topic><topic>Intestinal microflora</topic><topic>Life Sciences</topic><topic>Microbial activity</topic><topic>Microbial Ecology</topic><topic>Microbiology</topic><topic>Microbiomes</topic><topic>Microbiota</topic><topic>Microorganisms</topic><topic>Mini Review</topic><topic>Pathogenesis</topic><topic>Perturbation</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zaidi, Sahar</creatorcontrib><creatorcontrib>Ali, Khursheed</creatorcontrib><creatorcontrib>Khan, Asad U.</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Virology and AIDS Abstracts</collection><collection>Health &amp; Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health &amp; Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Archives of microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zaidi, Sahar</au><au>Ali, Khursheed</au><au>Khan, Asad U.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>It's all relative: analyzing microbiome compositions, its significance, pathogenesis and microbiota derived biofilms: Challenges and opportunities for disease intervention</atitle><jtitle>Archives of microbiology</jtitle><stitle>Arch Microbiol</stitle><addtitle>Arch Microbiol</addtitle><date>2023-07-01</date><risdate>2023</risdate><volume>205</volume><issue>7</issue><spage>257</spage><epage>257</epage><pages>257-257</pages><artnum>257</artnum><issn>0302-8933</issn><eissn>1432-072X</eissn><abstract>Concept of microorganisms has largely been perceived from their pathogenic view point. Nevertheless, it is being gradually revisited in terms of its significance to human health and now appears to be the most dominant force that shapes the immune system of the human body and also determines an individual’s predisposition to diseases. Human inhabits bacterial diversity (which is predominant among all microbial communities in human body) occupying 0.3% of body mass, known as microbiota. On birth, a part of microbiota that child obtains is essentially a mother’s legacy. So, the review was initiated with this critical topic of microbiotal inheritance. Since, each body site has distinct physiological specifications; therefore, they contain discrete microbiome composition that has been separately discussed along with dysbiosis-induced pathologies originating in different body organs. Factors affecting microbiome composition and may cause dysbiosis like antibiotics, delivery, feeding method etc. as well as the strategies that immune system adopts to prevent dysbiosis have been highlighted. We also tried to bring into attention the topic of dysbiosis induced biofilms, that enables cohort to survive stresses, evolve, disseminate and infection resurgence that is still in dormancy. Eventually, we put spotlight on microbiome significance in medical therapeutics. We didn’t merely confine article to gut microbiota, that is being studied more extensively. Numerous community forms at diverse body sites are inter-related, and being exposed to awfully variable perturbations appear to be challenging to evaluate perturbation risks holistically. All aspects have been elaborately discussed to achieve a global depiction of human microbiota in order to meet urgent necessity for protocol standardisation. Graphical abstract Demonstrates that environmental challenges (antibiotic use, alterations in diet, stress, smoking etc.) might cause dysbiosis i.e. transition of healthy microbiome composition to the one in which pathogenic microorganisms become more abundant, and eventually results in an infected state.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>37280443</pmid><doi>10.1007/s00203-023-03589-7</doi><tpages>1</tpages></addata></record>
fulltext fulltext
identifier ISSN: 0302-8933
ispartof Archives of microbiology, 2023-07, Vol.205 (7), p.257-257, Article 257
issn 0302-8933
1432-072X
language eng
recordid cdi_proquest_miscellaneous_2823495153
source SpringerLink Journals - AutoHoldings
subjects Antibiotics
Biochemistry
Biofilms
Biomedical and Life Sciences
Biotechnology
Body mass
Cell Biology
Composition
Dormancy
Dysbacteriosis
Ecology
Human body
Immune system
Intestinal microflora
Life Sciences
Microbial activity
Microbial Ecology
Microbiology
Microbiomes
Microbiota
Microorganisms
Mini Review
Pathogenesis
Perturbation
title It's all relative: analyzing microbiome compositions, its significance, pathogenesis and microbiota derived biofilms: Challenges and opportunities for disease intervention
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-11T09%3A05%3A50IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=It's%20all%20relative:%20analyzing%20microbiome%20compositions,%20its%20significance,%20pathogenesis%20and%20microbiota%20derived%20biofilms:%20Challenges%20and%20opportunities%20for%20disease%20intervention&rft.jtitle=Archives%20of%20microbiology&rft.au=Zaidi,%20Sahar&rft.date=2023-07-01&rft.volume=205&rft.issue=7&rft.spage=257&rft.epage=257&rft.pages=257-257&rft.artnum=257&rft.issn=0302-8933&rft.eissn=1432-072X&rft_id=info:doi/10.1007/s00203-023-03589-7&rft_dat=%3Cproquest_cross%3E2823495153%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2822877040&rft_id=info:pmid/37280443&rfr_iscdi=true