Distinct global metabolomic profiles of the model organism Caenorhabditis elegans during interactions with Staphylococcus aureus and Salmonella enterica Serovar Typhi
The interactive network of hosts with pathogenic microbes is still questionable. It has been hypothesized and reported that the host shows altered regulatory mechanisms for different pathogens. Several studies using transcriptomics and proteomics revealed the altered pathways and sequential regulati...
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Veröffentlicht in: | Molecular omics 2023-08, Vol.19 (7), p.574-584 |
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description | The interactive network of hosts with pathogenic microbes is still questionable. It has been hypothesized and reported that the host shows altered regulatory mechanisms for different pathogens. Several studies using transcriptomics and proteomics revealed the altered pathways and sequential regulations displayed by the host during bacterial interactions. Still, there is a gap in understanding the triggering molecule at transcriptomic and proteomic levels due to the lack of the knowledge of the interactive metabolites produced during their interactions. In this study, the global metabolomic approach was performed in the nematode model organism
upon exposure to a Gram-negative bacteria,
Serovar Typhi, and a Gram-positive bacteria,
, and the whole metabolome was categorized as endo-metabolome (internally produced) and exo-metabolome (externally releasing). The extracted metabolites were subjected to liquid chromatography mass spectrometry (ESI-LC/qToF-MS/MS). In total 5578, 4554 and 4046 endo-metabolites and 4451, 3625 and 1281 exo-metabolites were identified in
when exposed to
OP50, S. Typhi and
, respectively. Both the multivariate and univariate analyses were performed. The variation in endo- and exo-metabolome during candidate bacterial interactions was observed. The results indicated that, during
interaction, the exclusively enriched metabolites were significantly involved in alpha-linoleic acid metabolism. Similarly, the exclusively enriched metabolites during the interaction of S. Typhi were significantly involved in the phosphatidylinositol signalling system. The whole metabolomic profile presented here will build the scope to understand the role of metabolites and the respective pathways in host response during the early period of bacterial infections. |
doi_str_mv | 10.1039/d3mo00040k |
format | Article |
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upon exposure to a Gram-negative bacteria,
Serovar Typhi, and a Gram-positive bacteria,
, and the whole metabolome was categorized as endo-metabolome (internally produced) and exo-metabolome (externally releasing). The extracted metabolites were subjected to liquid chromatography mass spectrometry (ESI-LC/qToF-MS/MS). In total 5578, 4554 and 4046 endo-metabolites and 4451, 3625 and 1281 exo-metabolites were identified in
when exposed to
OP50, S. Typhi and
, respectively. Both the multivariate and univariate analyses were performed. The variation in endo- and exo-metabolome during candidate bacterial interactions was observed. The results indicated that, during
interaction, the exclusively enriched metabolites were significantly involved in alpha-linoleic acid metabolism. Similarly, the exclusively enriched metabolites during the interaction of S. Typhi were significantly involved in the phosphatidylinositol signalling system. The whole metabolomic profile presented here will build the scope to understand the role of metabolites and the respective pathways in host response during the early period of bacterial infections.</description><identifier>ISSN: 2515-4184</identifier><identifier>EISSN: 2515-4184</identifier><identifier>DOI: 10.1039/d3mo00040k</identifier><identifier>PMID: 37272185</identifier><language>eng</language><publisher>England</publisher><subject>Animals ; Caenorhabditis elegans ; Escherichia coli ; Proteomics ; Salmonella typhi ; Staphylococcus aureus ; Tandem Mass Spectrometry</subject><ispartof>Molecular omics, 2023-08, Vol.19 (7), p.574-584</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c246t-7430306c11704aa309e1c88deb3b745d3c5fea8f7f120504d1ee600b2d1360da3</cites><orcidid>0000-0001-9316-8141 ; 0000-0001-9641-6323</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/37272185$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Muthubharathi, Balasubramanian Chellammal</creatorcontrib><creatorcontrib>Ravichandiran, Velayutham</creatorcontrib><creatorcontrib>Balamurugan, Krishnaswamy</creatorcontrib><title>Distinct global metabolomic profiles of the model organism Caenorhabditis elegans during interactions with Staphylococcus aureus and Salmonella enterica Serovar Typhi</title><title>Molecular omics</title><addtitle>Mol Omics</addtitle><description>The interactive network of hosts with pathogenic microbes is still questionable. It has been hypothesized and reported that the host shows altered regulatory mechanisms for different pathogens. Several studies using transcriptomics and proteomics revealed the altered pathways and sequential regulations displayed by the host during bacterial interactions. Still, there is a gap in understanding the triggering molecule at transcriptomic and proteomic levels due to the lack of the knowledge of the interactive metabolites produced during their interactions. In this study, the global metabolomic approach was performed in the nematode model organism
upon exposure to a Gram-negative bacteria,
Serovar Typhi, and a Gram-positive bacteria,
, and the whole metabolome was categorized as endo-metabolome (internally produced) and exo-metabolome (externally releasing). The extracted metabolites were subjected to liquid chromatography mass spectrometry (ESI-LC/qToF-MS/MS). In total 5578, 4554 and 4046 endo-metabolites and 4451, 3625 and 1281 exo-metabolites were identified in
when exposed to
OP50, S. Typhi and
, respectively. Both the multivariate and univariate analyses were performed. The variation in endo- and exo-metabolome during candidate bacterial interactions was observed. The results indicated that, during
interaction, the exclusively enriched metabolites were significantly involved in alpha-linoleic acid metabolism. Similarly, the exclusively enriched metabolites during the interaction of S. Typhi were significantly involved in the phosphatidylinositol signalling system. The whole metabolomic profile presented here will build the scope to understand the role of metabolites and the respective pathways in host response during the early period of bacterial infections.</description><subject>Animals</subject><subject>Caenorhabditis elegans</subject><subject>Escherichia coli</subject><subject>Proteomics</subject><subject>Salmonella typhi</subject><subject>Staphylococcus aureus</subject><subject>Tandem Mass Spectrometry</subject><issn>2515-4184</issn><issn>2515-4184</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpNUctuFDEQtBCIREsu-QDUR4S04Me89og2gSAS5bDJedRj9-wY7PFie0D7Q3xnZkhAOVWru7r6UYydC_5BcLX5aJQPnPOC_3jBTmUpynUhmuLls_iEnaX0feaIjWykbF6zE1XLWoqmPGV_LmzKdtQZ9i506MBTxi644K2GQwy9dZQg9JAHAh8MOQhxj6NNHrZIY4gDdsZmm4AczYUEZop23IMdM0XU2YY599vmAXYZD8PRBR20nhLgFGmB0cAOnQ8jOYdAS5vVCDuK4RdGuDseBvuGverRJTp7whW7_3x5t71aX99--br9dL3Wsqjyui4UV7zSQtS8QFR8Q0I3jaFOdXVRGqXLnrDp615IXvLCCKKK804aoSpuUK3Yu0fd-fSfE6Xcepv0sthIYUrt8sCaV8uYFXv_SNUxpBSpbw_ReozHVvB2saa9UDe3f635NpPfPulOnSfzn_rPCPUA2H2Nag</recordid><startdate>20230814</startdate><enddate>20230814</enddate><creator>Muthubharathi, Balasubramanian Chellammal</creator><creator>Ravichandiran, Velayutham</creator><creator>Balamurugan, Krishnaswamy</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0001-9316-8141</orcidid><orcidid>https://orcid.org/0000-0001-9641-6323</orcidid></search><sort><creationdate>20230814</creationdate><title>Distinct global metabolomic profiles of the model organism Caenorhabditis elegans during interactions with Staphylococcus aureus and Salmonella enterica Serovar Typhi</title><author>Muthubharathi, Balasubramanian Chellammal ; Ravichandiran, Velayutham ; Balamurugan, Krishnaswamy</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c246t-7430306c11704aa309e1c88deb3b745d3c5fea8f7f120504d1ee600b2d1360da3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Animals</topic><topic>Caenorhabditis elegans</topic><topic>Escherichia coli</topic><topic>Proteomics</topic><topic>Salmonella typhi</topic><topic>Staphylococcus aureus</topic><topic>Tandem Mass Spectrometry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Muthubharathi, Balasubramanian Chellammal</creatorcontrib><creatorcontrib>Ravichandiran, Velayutham</creatorcontrib><creatorcontrib>Balamurugan, Krishnaswamy</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Molecular omics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Muthubharathi, Balasubramanian Chellammal</au><au>Ravichandiran, Velayutham</au><au>Balamurugan, Krishnaswamy</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Distinct global metabolomic profiles of the model organism Caenorhabditis elegans during interactions with Staphylococcus aureus and Salmonella enterica Serovar Typhi</atitle><jtitle>Molecular omics</jtitle><addtitle>Mol Omics</addtitle><date>2023-08-14</date><risdate>2023</risdate><volume>19</volume><issue>7</issue><spage>574</spage><epage>584</epage><pages>574-584</pages><issn>2515-4184</issn><eissn>2515-4184</eissn><abstract>The interactive network of hosts with pathogenic microbes is still questionable. It has been hypothesized and reported that the host shows altered regulatory mechanisms for different pathogens. Several studies using transcriptomics and proteomics revealed the altered pathways and sequential regulations displayed by the host during bacterial interactions. Still, there is a gap in understanding the triggering molecule at transcriptomic and proteomic levels due to the lack of the knowledge of the interactive metabolites produced during their interactions. In this study, the global metabolomic approach was performed in the nematode model organism
upon exposure to a Gram-negative bacteria,
Serovar Typhi, and a Gram-positive bacteria,
, and the whole metabolome was categorized as endo-metabolome (internally produced) and exo-metabolome (externally releasing). The extracted metabolites were subjected to liquid chromatography mass spectrometry (ESI-LC/qToF-MS/MS). In total 5578, 4554 and 4046 endo-metabolites and 4451, 3625 and 1281 exo-metabolites were identified in
when exposed to
OP50, S. Typhi and
, respectively. Both the multivariate and univariate analyses were performed. The variation in endo- and exo-metabolome during candidate bacterial interactions was observed. The results indicated that, during
interaction, the exclusively enriched metabolites were significantly involved in alpha-linoleic acid metabolism. Similarly, the exclusively enriched metabolites during the interaction of S. Typhi were significantly involved in the phosphatidylinositol signalling system. The whole metabolomic profile presented here will build the scope to understand the role of metabolites and the respective pathways in host response during the early period of bacterial infections.</abstract><cop>England</cop><pmid>37272185</pmid><doi>10.1039/d3mo00040k</doi><tpages>11</tpages><orcidid>https://orcid.org/0000-0001-9316-8141</orcidid><orcidid>https://orcid.org/0000-0001-9641-6323</orcidid></addata></record> |
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source | MEDLINE; Royal Society Of Chemistry Journals 2008- |
subjects | Animals Caenorhabditis elegans Escherichia coli Proteomics Salmonella typhi Staphylococcus aureus Tandem Mass Spectrometry |
title | Distinct global metabolomic profiles of the model organism Caenorhabditis elegans during interactions with Staphylococcus aureus and Salmonella enterica Serovar Typhi |
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