Alcanivorax xiamenensis sp. nov., a novel marine hydrocarbonoclastic bacterium isolated from surface seawater

A novel -related strain, designated 6-D-6 , was isolated from the surface seawater collected around Xiamen Island. The novel strain is Gram-stain-negative, rod-shaped and motile, and grows at 10-45 °C, pH 6.0-9.0 and in the presence of 0.5-15.0 % (w/v) NaCl. Phylogenetic analysis based on the 16S rR...

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Veröffentlicht in:International journal of systematic and evolutionary microbiology 2023-03, Vol.73 (3)
Hauptverfasser: Lai, Qiliang, Fu, Xiaoteng, Wang, Jianning, Dong, Chunming, Wang, Liping, Wang, Wanpeng, Shao, Zongze
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container_title International journal of systematic and evolutionary microbiology
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creator Lai, Qiliang
Fu, Xiaoteng
Wang, Jianning
Dong, Chunming
Wang, Liping
Wang, Wanpeng
Shao, Zongze
description A novel -related strain, designated 6-D-6 , was isolated from the surface seawater collected around Xiamen Island. The novel strain is Gram-stain-negative, rod-shaped and motile, and grows at 10-45 °C, pH 6.0-9.0 and in the presence of 0.5-15.0 % (w/v) NaCl. Phylogenetic analysis based on the 16S rRNA gene sequences indicated that it belongs to the genus , with the highest sequence similarity to B5 (99.9 %), followed by JC109 (99.5 %), MACL04 (99.3 %) and other 13 species of the genus (93.8 %-95.6 %). The digital DNA-DNA hybridization and average nucleotide identity values between strain 6-D-6 and three close type strains were 40.1-42.9/90.6-91.4 %, and others were below 22.9/85.1 %, respectively. The novel strain contained major cellular fatty acids of C (31.0 %), C ω8 cyclo (23.5 %), C cyclo (9.7 %), C 3OH (8.6 %), summed feature 8 (7.6 %) and C (5.4 %). The genomic G+C content of strain 6-D-6 was 61.38 %. Phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, two unidentified phospholipids and one amino-group-containing phospholipid were detected. On the basis of phenotypic and genotypic characteristics, strain 6-D-6 represents a novel species within the genus , for which the name sp. nov. is proposed. The type strain is 6-D-6 (=MCCC 1A01359 =KCTC 92480 ).
doi_str_mv 10.1099/ijsem.0.005798
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The novel strain is Gram-stain-negative, rod-shaped and motile, and grows at 10-45 °C, pH 6.0-9.0 and in the presence of 0.5-15.0 % (w/v) NaCl. Phylogenetic analysis based on the 16S rRNA gene sequences indicated that it belongs to the genus , with the highest sequence similarity to B5 (99.9 %), followed by JC109 (99.5 %), MACL04 (99.3 %) and other 13 species of the genus (93.8 %-95.6 %). The digital DNA-DNA hybridization and average nucleotide identity values between strain 6-D-6 and three close type strains were 40.1-42.9/90.6-91.4 %, and others were below 22.9/85.1 %, respectively. The novel strain contained major cellular fatty acids of C (31.0 %), C ω8 cyclo (23.5 %), C cyclo (9.7 %), C 3OH (8.6 %), summed feature 8 (7.6 %) and C (5.4 %). The genomic G+C content of strain 6-D-6 was 61.38 %. Phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, two unidentified phospholipids and one amino-group-containing phospholipid were detected. On the basis of phenotypic and genotypic characteristics, strain 6-D-6 represents a novel species within the genus , for which the name sp. nov. is proposed. 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The novel strain is Gram-stain-negative, rod-shaped and motile, and grows at 10-45 °C, pH 6.0-9.0 and in the presence of 0.5-15.0 % (w/v) NaCl. Phylogenetic analysis based on the 16S rRNA gene sequences indicated that it belongs to the genus , with the highest sequence similarity to B5 (99.9 %), followed by JC109 (99.5 %), MACL04 (99.3 %) and other 13 species of the genus (93.8 %-95.6 %). The digital DNA-DNA hybridization and average nucleotide identity values between strain 6-D-6 and three close type strains were 40.1-42.9/90.6-91.4 %, and others were below 22.9/85.1 %, respectively. The novel strain contained major cellular fatty acids of C (31.0 %), C ω8 cyclo (23.5 %), C cyclo (9.7 %), C 3OH (8.6 %), summed feature 8 (7.6 %) and C (5.4 %). The genomic G+C content of strain 6-D-6 was 61.38 %. Phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, two unidentified phospholipids and one amino-group-containing phospholipid were detected. On the basis of phenotypic and genotypic characteristics, strain 6-D-6 represents a novel species within the genus , for which the name sp. nov. is proposed. 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The novel strain is Gram-stain-negative, rod-shaped and motile, and grows at 10-45 °C, pH 6.0-9.0 and in the presence of 0.5-15.0 % (w/v) NaCl. Phylogenetic analysis based on the 16S rRNA gene sequences indicated that it belongs to the genus , with the highest sequence similarity to B5 (99.9 %), followed by JC109 (99.5 %), MACL04 (99.3 %) and other 13 species of the genus (93.8 %-95.6 %). The digital DNA-DNA hybridization and average nucleotide identity values between strain 6-D-6 and three close type strains were 40.1-42.9/90.6-91.4 %, and others were below 22.9/85.1 %, respectively. The novel strain contained major cellular fatty acids of C (31.0 %), C ω8 cyclo (23.5 %), C cyclo (9.7 %), C 3OH (8.6 %), summed feature 8 (7.6 %) and C (5.4 %). The genomic G+C content of strain 6-D-6 was 61.38 %. Phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, two unidentified phospholipids and one amino-group-containing phospholipid were detected. On the basis of phenotypic and genotypic characteristics, strain 6-D-6 represents a novel species within the genus , for which the name sp. nov. is proposed. The type strain is 6-D-6 (=MCCC 1A01359 =KCTC 92480 ).</abstract><cop>England</cop><pmid>37009847</pmid><doi>10.1099/ijsem.0.005798</doi><orcidid>https://orcid.org/0000-0002-6066-7013</orcidid></addata></record>
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source MEDLINE; Microbiology Society; EZB-FREE-00999 freely available EZB journals; Alma/SFX Local Collection
subjects Alcanivoraceae
Bacterial Typing Techniques
Base Composition
DNA, Bacterial - genetics
Fatty Acids - chemistry
Phospholipids - chemistry
Phylogeny
RNA, Ribosomal, 16S - genetics
Seawater - microbiology
Sequence Analysis, DNA
title Alcanivorax xiamenensis sp. nov., a novel marine hydrocarbonoclastic bacterium isolated from surface seawater
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