Co-occurrence pattern of bacteria and fungi on the leaves of the invasive aquatic plant Alternanthera philoxeroides

Abstract The microbes that are attached to aquatic plants play critical roles in nutrient cycles and the maintenance of water quality. However, their community compositions, biodiversity and functions have not been well explored for the invasive plants in inland waters. Here, the co-occurrence patte...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:FEMS microbiology ecology 2023-03, Vol.99 (4)
Hauptverfasser: Zhao, Biying, Chen, Jiangjun, Zou, Yujuan, Dai, Zhicong, Xing, Peng, Wu, Qinglong L
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext bestellen
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page
container_issue 4
container_start_page
container_title FEMS microbiology ecology
container_volume 99
creator Zhao, Biying
Chen, Jiangjun
Zou, Yujuan
Dai, Zhicong
Xing, Peng
Wu, Qinglong L
description Abstract The microbes that are attached to aquatic plants play critical roles in nutrient cycles and the maintenance of water quality. However, their community compositions, biodiversity and functions have not been well explored for the invasive plants in inland waters. Here, the co-occurrence patterns between bacteria and fungi on the leaves of Alternanthera philoxeroides and their potential ecological interactions were studied during the growing seasons. Along with significant variations in the alpha diversity of attached microbes over time, shifts in their community composition were significantly associated with the dynamics of plant stoichiometry, substrate composition and extracellular enzyme activity. Deterministic processes (heterogenous selection) play a predominant role in community assembly of the attached bacteria, while stochasticity (undominated process) was the major driver for the attached fungal assembly. Compared with the free-living microbial network, the attached microbial network was structurally simple but highly modular. The attached microbes had more intra-phylum links (primarily within the phyla Actinomycetota, Alphaproteobacteria, Bacillota and Basidiomycota) and distinct co-exclusion patterns between bacteria and fungi in the modules. In summary, the study will be helpful in understanding the microbes and their interactions in the phyllosphere of A. philoxeroides, an key invasive species under national management and control. The composition, dynamics and co-occurrence pattern of bacteria and fungi in the phyllosphere of the invasive aquatic plant Alternanthera philoxeroides were investigated.
doi_str_mv 10.1093/femsec/fiad022
format Article
fullrecord <record><control><sourceid>proquest_TOX</sourceid><recordid>TN_cdi_proquest_miscellaneous_2791374464</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><oup_id>10.1093/femsec/fiad022</oup_id><sourcerecordid>3050610234</sourcerecordid><originalsourceid>FETCH-LOGICAL-c357t-76ee58ffd1f9acece368d0cb1363088b88fd0ea0072f37a8cce0dc1beac413373</originalsourceid><addsrcrecordid>eNqFkc1LxDAQxYMorq5ePUrAix66mzRt0h5l8QsWvOi5TNOJm6Xb1KRd9L-3ZVcRL57mDfzm8ZhHyAVnM85yMTe4CajnxkLF4viAnPBUJZHME374S0_IaQhrxngqEnZMJkLmUiglT0hYuMhp3XuPjUbaQtehb6gztAQ9SAsUmoqavnmz1DW0WyGtEbYYRmbcbLOFYLdI4b2Hzmra1tB09LYejQa1Qg-0XdnafaB3tsJwRo4M1AHP93NKXu_vXhaP0fL54Wlxu4y0SFUXKYmYZsZU3OSgUaOQWcV0yYUULMvKLDMVQ2BMxUYoyLRGVmleIuiEC6HElFzvfFvv3nsMXbGxQWM95EPXhyJWORcqSWQyoFd_0LXrh_h1KARLmeQsFiM121HauxA8mqL1dgP-s-CsGOsodnUU-zqGg8u9bV9usPrBv_8_ADc7wPXtf2ZfNvOYZg</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>3050610234</pqid></control><display><type>article</type><title>Co-occurrence pattern of bacteria and fungi on the leaves of the invasive aquatic plant Alternanthera philoxeroides</title><source>Oxford Journals Open Access Collection</source><creator>Zhao, Biying ; Chen, Jiangjun ; Zou, Yujuan ; Dai, Zhicong ; Xing, Peng ; Wu, Qinglong L</creator><creatorcontrib>Zhao, Biying ; Chen, Jiangjun ; Zou, Yujuan ; Dai, Zhicong ; Xing, Peng ; Wu, Qinglong L</creatorcontrib><description>Abstract The microbes that are attached to aquatic plants play critical roles in nutrient cycles and the maintenance of water quality. However, their community compositions, biodiversity and functions have not been well explored for the invasive plants in inland waters. Here, the co-occurrence patterns between bacteria and fungi on the leaves of Alternanthera philoxeroides and their potential ecological interactions were studied during the growing seasons. Along with significant variations in the alpha diversity of attached microbes over time, shifts in their community composition were significantly associated with the dynamics of plant stoichiometry, substrate composition and extracellular enzyme activity. Deterministic processes (heterogenous selection) play a predominant role in community assembly of the attached bacteria, while stochasticity (undominated process) was the major driver for the attached fungal assembly. Compared with the free-living microbial network, the attached microbial network was structurally simple but highly modular. The attached microbes had more intra-phylum links (primarily within the phyla Actinomycetota, Alphaproteobacteria, Bacillota and Basidiomycota) and distinct co-exclusion patterns between bacteria and fungi in the modules. In summary, the study will be helpful in understanding the microbes and their interactions in the phyllosphere of A. philoxeroides, an key invasive species under national management and control. The composition, dynamics and co-occurrence pattern of bacteria and fungi in the phyllosphere of the invasive aquatic plant Alternanthera philoxeroides were investigated.</description><identifier>ISSN: 1574-6941</identifier><identifier>ISSN: 0168-6496</identifier><identifier>EISSN: 1574-6941</identifier><identifier>DOI: 10.1093/femsec/fiad022</identifier><identifier>PMID: 36963776</identifier><language>eng</language><publisher>England: Oxford University Press</publisher><subject>Alternanthera philoxeroides ; Aquatic plants ; Assembly ; Bacteria ; Bacteria - genetics ; Biodiversity ; Community composition ; Composition ; Enzymatic activity ; Enzyme activity ; Fungi ; Fungi - genetics ; Growing season ; Inland waters ; Introduced Species ; Invasive plants ; Invasive species ; Leaves ; Microorganisms ; Nutrient cycles ; Phyllosphere ; Plant Leaves - microbiology ; Plants ; Stochasticity ; Stoichiometry ; Substrates ; Water quality</subject><ispartof>FEMS microbiology ecology, 2023-03, Vol.99 (4)</ispartof><rights>The Author(s) 2023. Published by Oxford University Press on behalf of FEMS. 2023</rights><rights>The Author(s) 2023. Published by Oxford University Press on behalf of FEMS.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c357t-76ee58ffd1f9acece368d0cb1363088b88fd0ea0072f37a8cce0dc1beac413373</citedby><cites>FETCH-LOGICAL-c357t-76ee58ffd1f9acece368d0cb1363088b88fd0ea0072f37a8cce0dc1beac413373</cites><orcidid>0000-0002-0748-8059 ; 0000-0002-4917-5181</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,1604,27924,27925</link.rule.ids><linktorsrc>$$Uhttps://dx.doi.org/10.1093/femsec/fiad022$$EView_record_in_Oxford_University_Press$$FView_record_in_$$GOxford_University_Press</linktorsrc><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/36963776$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Zhao, Biying</creatorcontrib><creatorcontrib>Chen, Jiangjun</creatorcontrib><creatorcontrib>Zou, Yujuan</creatorcontrib><creatorcontrib>Dai, Zhicong</creatorcontrib><creatorcontrib>Xing, Peng</creatorcontrib><creatorcontrib>Wu, Qinglong L</creatorcontrib><title>Co-occurrence pattern of bacteria and fungi on the leaves of the invasive aquatic plant Alternanthera philoxeroides</title><title>FEMS microbiology ecology</title><addtitle>FEMS Microbiol Ecol</addtitle><description>Abstract The microbes that are attached to aquatic plants play critical roles in nutrient cycles and the maintenance of water quality. However, their community compositions, biodiversity and functions have not been well explored for the invasive plants in inland waters. Here, the co-occurrence patterns between bacteria and fungi on the leaves of Alternanthera philoxeroides and their potential ecological interactions were studied during the growing seasons. Along with significant variations in the alpha diversity of attached microbes over time, shifts in their community composition were significantly associated with the dynamics of plant stoichiometry, substrate composition and extracellular enzyme activity. Deterministic processes (heterogenous selection) play a predominant role in community assembly of the attached bacteria, while stochasticity (undominated process) was the major driver for the attached fungal assembly. Compared with the free-living microbial network, the attached microbial network was structurally simple but highly modular. The attached microbes had more intra-phylum links (primarily within the phyla Actinomycetota, Alphaproteobacteria, Bacillota and Basidiomycota) and distinct co-exclusion patterns between bacteria and fungi in the modules. In summary, the study will be helpful in understanding the microbes and their interactions in the phyllosphere of A. philoxeroides, an key invasive species under national management and control. The composition, dynamics and co-occurrence pattern of bacteria and fungi in the phyllosphere of the invasive aquatic plant Alternanthera philoxeroides were investigated.</description><subject>Alternanthera philoxeroides</subject><subject>Aquatic plants</subject><subject>Assembly</subject><subject>Bacteria</subject><subject>Bacteria - genetics</subject><subject>Biodiversity</subject><subject>Community composition</subject><subject>Composition</subject><subject>Enzymatic activity</subject><subject>Enzyme activity</subject><subject>Fungi</subject><subject>Fungi - genetics</subject><subject>Growing season</subject><subject>Inland waters</subject><subject>Introduced Species</subject><subject>Invasive plants</subject><subject>Invasive species</subject><subject>Leaves</subject><subject>Microorganisms</subject><subject>Nutrient cycles</subject><subject>Phyllosphere</subject><subject>Plant Leaves - microbiology</subject><subject>Plants</subject><subject>Stochasticity</subject><subject>Stoichiometry</subject><subject>Substrates</subject><subject>Water quality</subject><issn>1574-6941</issn><issn>0168-6496</issn><issn>1574-6941</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqFkc1LxDAQxYMorq5ePUrAix66mzRt0h5l8QsWvOi5TNOJm6Xb1KRd9L-3ZVcRL57mDfzm8ZhHyAVnM85yMTe4CajnxkLF4viAnPBUJZHME374S0_IaQhrxngqEnZMJkLmUiglT0hYuMhp3XuPjUbaQtehb6gztAQ9SAsUmoqavnmz1DW0WyGtEbYYRmbcbLOFYLdI4b2Hzmra1tB09LYejQa1Qg-0XdnafaB3tsJwRo4M1AHP93NKXu_vXhaP0fL54Wlxu4y0SFUXKYmYZsZU3OSgUaOQWcV0yYUULMvKLDMVQ2BMxUYoyLRGVmleIuiEC6HElFzvfFvv3nsMXbGxQWM95EPXhyJWORcqSWQyoFd_0LXrh_h1KARLmeQsFiM121HauxA8mqL1dgP-s-CsGOsodnUU-zqGg8u9bV9usPrBv_8_ADc7wPXtf2ZfNvOYZg</recordid><startdate>20230323</startdate><enddate>20230323</enddate><creator>Zhao, Biying</creator><creator>Chen, Jiangjun</creator><creator>Zou, Yujuan</creator><creator>Dai, Zhicong</creator><creator>Xing, Peng</creator><creator>Wu, Qinglong L</creator><general>Oxford University Press</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7SN</scope><scope>7T7</scope><scope>7TK</scope><scope>7TM</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PATMY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-0748-8059</orcidid><orcidid>https://orcid.org/0000-0002-4917-5181</orcidid></search><sort><creationdate>20230323</creationdate><title>Co-occurrence pattern of bacteria and fungi on the leaves of the invasive aquatic plant Alternanthera philoxeroides</title><author>Zhao, Biying ; Chen, Jiangjun ; Zou, Yujuan ; Dai, Zhicong ; Xing, Peng ; Wu, Qinglong L</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c357t-76ee58ffd1f9acece368d0cb1363088b88fd0ea0072f37a8cce0dc1beac413373</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Alternanthera philoxeroides</topic><topic>Aquatic plants</topic><topic>Assembly</topic><topic>Bacteria</topic><topic>Bacteria - genetics</topic><topic>Biodiversity</topic><topic>Community composition</topic><topic>Composition</topic><topic>Enzymatic activity</topic><topic>Enzyme activity</topic><topic>Fungi</topic><topic>Fungi - genetics</topic><topic>Growing season</topic><topic>Inland waters</topic><topic>Introduced Species</topic><topic>Invasive plants</topic><topic>Invasive species</topic><topic>Leaves</topic><topic>Microorganisms</topic><topic>Nutrient cycles</topic><topic>Phyllosphere</topic><topic>Plant Leaves - microbiology</topic><topic>Plants</topic><topic>Stochasticity</topic><topic>Stoichiometry</topic><topic>Substrates</topic><topic>Water quality</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zhao, Biying</creatorcontrib><creatorcontrib>Chen, Jiangjun</creatorcontrib><creatorcontrib>Zou, Yujuan</creatorcontrib><creatorcontrib>Dai, Zhicong</creatorcontrib><creatorcontrib>Xing, Peng</creatorcontrib><creatorcontrib>Wu, Qinglong L</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Calcium &amp; Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Ecology Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Health &amp; Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural &amp; Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health &amp; Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Environmental Science Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Environmental Science Collection</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>FEMS microbiology ecology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext_linktorsrc</fulltext></delivery><addata><au>Zhao, Biying</au><au>Chen, Jiangjun</au><au>Zou, Yujuan</au><au>Dai, Zhicong</au><au>Xing, Peng</au><au>Wu, Qinglong L</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Co-occurrence pattern of bacteria and fungi on the leaves of the invasive aquatic plant Alternanthera philoxeroides</atitle><jtitle>FEMS microbiology ecology</jtitle><addtitle>FEMS Microbiol Ecol</addtitle><date>2023-03-23</date><risdate>2023</risdate><volume>99</volume><issue>4</issue><issn>1574-6941</issn><issn>0168-6496</issn><eissn>1574-6941</eissn><abstract>Abstract The microbes that are attached to aquatic plants play critical roles in nutrient cycles and the maintenance of water quality. However, their community compositions, biodiversity and functions have not been well explored for the invasive plants in inland waters. Here, the co-occurrence patterns between bacteria and fungi on the leaves of Alternanthera philoxeroides and their potential ecological interactions were studied during the growing seasons. Along with significant variations in the alpha diversity of attached microbes over time, shifts in their community composition were significantly associated with the dynamics of plant stoichiometry, substrate composition and extracellular enzyme activity. Deterministic processes (heterogenous selection) play a predominant role in community assembly of the attached bacteria, while stochasticity (undominated process) was the major driver for the attached fungal assembly. Compared with the free-living microbial network, the attached microbial network was structurally simple but highly modular. The attached microbes had more intra-phylum links (primarily within the phyla Actinomycetota, Alphaproteobacteria, Bacillota and Basidiomycota) and distinct co-exclusion patterns between bacteria and fungi in the modules. In summary, the study will be helpful in understanding the microbes and their interactions in the phyllosphere of A. philoxeroides, an key invasive species under national management and control. The composition, dynamics and co-occurrence pattern of bacteria and fungi in the phyllosphere of the invasive aquatic plant Alternanthera philoxeroides were investigated.</abstract><cop>England</cop><pub>Oxford University Press</pub><pmid>36963776</pmid><doi>10.1093/femsec/fiad022</doi><orcidid>https://orcid.org/0000-0002-0748-8059</orcidid><orcidid>https://orcid.org/0000-0002-4917-5181</orcidid></addata></record>
fulltext fulltext_linktorsrc
identifier ISSN: 1574-6941
ispartof FEMS microbiology ecology, 2023-03, Vol.99 (4)
issn 1574-6941
0168-6496
1574-6941
language eng
recordid cdi_proquest_miscellaneous_2791374464
source Oxford Journals Open Access Collection
subjects Alternanthera philoxeroides
Aquatic plants
Assembly
Bacteria
Bacteria - genetics
Biodiversity
Community composition
Composition
Enzymatic activity
Enzyme activity
Fungi
Fungi - genetics
Growing season
Inland waters
Introduced Species
Invasive plants
Invasive species
Leaves
Microorganisms
Nutrient cycles
Phyllosphere
Plant Leaves - microbiology
Plants
Stochasticity
Stoichiometry
Substrates
Water quality
title Co-occurrence pattern of bacteria and fungi on the leaves of the invasive aquatic plant Alternanthera philoxeroides
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-24T03%3A24%3A27IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_TOX&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Co-occurrence%20pattern%20of%20bacteria%20and%20fungi%20on%20the%20leaves%20of%20the%20invasive%20aquatic%20plant%20Alternanthera%20philoxeroides&rft.jtitle=FEMS%20microbiology%20ecology&rft.au=Zhao,%20Biying&rft.date=2023-03-23&rft.volume=99&rft.issue=4&rft.issn=1574-6941&rft.eissn=1574-6941&rft_id=info:doi/10.1093/femsec/fiad022&rft_dat=%3Cproquest_TOX%3E3050610234%3C/proquest_TOX%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=3050610234&rft_id=info:pmid/36963776&rft_oup_id=10.1093/femsec/fiad022&rfr_iscdi=true