Distinct microbiome profiles in convergent wisdom tooth impactions
Long-term retention of impacted third molars (wisdom teeth) is associated with plaque stagnation and the development of caries on the adjacent surface of the neighboring second molar. While caries and tooth loss are common outcomes of impaction, there is currently insufficient evidence to support th...
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Veröffentlicht in: | Journal of applied microbiology 2023-01, Vol.134 (1) |
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creator | Campbell, Paul M Toedtling, Verena Humphreys, Gavin J Knight, Christopher G Devlin, Hugh McBain, Andrew J |
description | Long-term retention of impacted third molars (wisdom teeth) is associated with plaque stagnation and the development of caries on the adjacent surface of the neighboring second molar. While caries and tooth loss are common outcomes of impaction, there is currently insufficient evidence to support the pre-emptive removal of asymptomatic wisdom teeth. Emerging evidence suggests that convergently growing impactions are associated with caries. We have therefore investigated the composition of dental plaque on the distal surface of the mandibular second molar at various impaction angles.
We have compared the microbiome of these surfaces at four impaction angulations using short-read sequencing of the bacterial 16S rRNA gene: two convergent (horizontal and mesial) and two divergent (distal and vertical) angulations, and in cases where the wisdom tooth is missing. Horizontal angulations exhibited lower microbial diversity than mesial impactions. Amplicon Sequence Variants (ASVs) associated with Veillonella were significantly more abundant at impactions with angulations toward the midline. Using machine learning, a random forest classifier trained to distinguish microbiome profiles was used to predict the native angulations for a subset of samples, with samples from the two convergent impactions estimated with the greatest accuracy.
Differences in microbial diversity were apparent between caries-associated convergent (horizontal and mesial) impacted wisdom teeth, as well as greater abundances of Veillonella ASVs at horizontal impactions. |
doi_str_mv | 10.1093/jambio/lxac054 |
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We have compared the microbiome of these surfaces at four impaction angulations using short-read sequencing of the bacterial 16S rRNA gene: two convergent (horizontal and mesial) and two divergent (distal and vertical) angulations, and in cases where the wisdom tooth is missing. Horizontal angulations exhibited lower microbial diversity than mesial impactions. Amplicon Sequence Variants (ASVs) associated with Veillonella were significantly more abundant at impactions with angulations toward the midline. Using machine learning, a random forest classifier trained to distinguish microbiome profiles was used to predict the native angulations for a subset of samples, with samples from the two convergent impactions estimated with the greatest accuracy.
Differences in microbial diversity were apparent between caries-associated convergent (horizontal and mesial) impacted wisdom teeth, as well as greater abundances of Veillonella ASVs at horizontal impactions.</description><identifier>ISSN: 1365-2672</identifier><identifier>EISSN: 1365-2672</identifier><identifier>DOI: 10.1093/jambio/lxac054</identifier><identifier>PMID: 36626760</identifier><language>eng</language><publisher>England</publisher><subject>Evidence Gaps ; Humans ; Molar, Third ; RNA, Ribosomal, 16S - genetics ; Tooth, Impacted - complications</subject><ispartof>Journal of applied microbiology, 2023-01, Vol.134 (1)</ispartof><rights>The Author(s) 2022. Published by Oxford University Press on behalf of Applied Microbiology International.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c290t-a3d6872ee7260930fbb34dfabb7176dc006c32997b5ba0a9aa9f5f82664ad4123</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/36626760$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Campbell, Paul M</creatorcontrib><creatorcontrib>Toedtling, Verena</creatorcontrib><creatorcontrib>Humphreys, Gavin J</creatorcontrib><creatorcontrib>Knight, Christopher G</creatorcontrib><creatorcontrib>Devlin, Hugh</creatorcontrib><creatorcontrib>McBain, Andrew J</creatorcontrib><title>Distinct microbiome profiles in convergent wisdom tooth impactions</title><title>Journal of applied microbiology</title><addtitle>J Appl Microbiol</addtitle><description>Long-term retention of impacted third molars (wisdom teeth) is associated with plaque stagnation and the development of caries on the adjacent surface of the neighboring second molar. While caries and tooth loss are common outcomes of impaction, there is currently insufficient evidence to support the pre-emptive removal of asymptomatic wisdom teeth. Emerging evidence suggests that convergently growing impactions are associated with caries. We have therefore investigated the composition of dental plaque on the distal surface of the mandibular second molar at various impaction angles.
We have compared the microbiome of these surfaces at four impaction angulations using short-read sequencing of the bacterial 16S rRNA gene: two convergent (horizontal and mesial) and two divergent (distal and vertical) angulations, and in cases where the wisdom tooth is missing. Horizontal angulations exhibited lower microbial diversity than mesial impactions. Amplicon Sequence Variants (ASVs) associated with Veillonella were significantly more abundant at impactions with angulations toward the midline. Using machine learning, a random forest classifier trained to distinguish microbiome profiles was used to predict the native angulations for a subset of samples, with samples from the two convergent impactions estimated with the greatest accuracy.
Differences in microbial diversity were apparent between caries-associated convergent (horizontal and mesial) impacted wisdom teeth, as well as greater abundances of Veillonella ASVs at horizontal impactions.</description><subject>Evidence Gaps</subject><subject>Humans</subject><subject>Molar, Third</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Tooth, Impacted - complications</subject><issn>1365-2672</issn><issn>1365-2672</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpNkM1PAyEQxYnR2Fq9ejR79LLtALvQPWrrV9LEi54JsKA0y1IX6sd_L6bVeJrJ5M3Lez-EzjFMMTR0tpZeuTDrPqWGujpAY0xZXRLGyeG_fYROYlwDYAo1O0Yjylg-Mxij66WLyfU6Fd7pIWQvb4rNEKzrTCxcX-jQv5vhxfSp-HCxDb5IIaTXwvmN1MmFPp6iIyu7aM72c4Keb2-eFvfl6vHuYXG1KjVpIJWStmzOiTGcsJwcrFK0aq1UimPOWg3ANCVNw1WtJMhGysbWdk4Yq2RbYUIn6HLnm-O9bU1MwruoTdfJ3oRtFIRzyvGcUsjS6U6aK8U4GCs2g_Ny-BIYxA83seMm9tzyw8Xee6u8af_kv6DoNwvnbD0</recordid><startdate>20230123</startdate><enddate>20230123</enddate><creator>Campbell, Paul M</creator><creator>Toedtling, Verena</creator><creator>Humphreys, Gavin J</creator><creator>Knight, Christopher G</creator><creator>Devlin, Hugh</creator><creator>McBain, Andrew J</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20230123</creationdate><title>Distinct microbiome profiles in convergent wisdom tooth impactions</title><author>Campbell, Paul M ; Toedtling, Verena ; Humphreys, Gavin J ; Knight, Christopher G ; Devlin, Hugh ; McBain, Andrew J</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c290t-a3d6872ee7260930fbb34dfabb7176dc006c32997b5ba0a9aa9f5f82664ad4123</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Evidence Gaps</topic><topic>Humans</topic><topic>Molar, Third</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Tooth, Impacted - complications</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Campbell, Paul M</creatorcontrib><creatorcontrib>Toedtling, Verena</creatorcontrib><creatorcontrib>Humphreys, Gavin J</creatorcontrib><creatorcontrib>Knight, Christopher G</creatorcontrib><creatorcontrib>Devlin, Hugh</creatorcontrib><creatorcontrib>McBain, Andrew J</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of applied microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Campbell, Paul M</au><au>Toedtling, Verena</au><au>Humphreys, Gavin J</au><au>Knight, Christopher G</au><au>Devlin, Hugh</au><au>McBain, Andrew J</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Distinct microbiome profiles in convergent wisdom tooth impactions</atitle><jtitle>Journal of applied microbiology</jtitle><addtitle>J Appl Microbiol</addtitle><date>2023-01-23</date><risdate>2023</risdate><volume>134</volume><issue>1</issue><issn>1365-2672</issn><eissn>1365-2672</eissn><abstract>Long-term retention of impacted third molars (wisdom teeth) is associated with plaque stagnation and the development of caries on the adjacent surface of the neighboring second molar. While caries and tooth loss are common outcomes of impaction, there is currently insufficient evidence to support the pre-emptive removal of asymptomatic wisdom teeth. Emerging evidence suggests that convergently growing impactions are associated with caries. We have therefore investigated the composition of dental plaque on the distal surface of the mandibular second molar at various impaction angles.
We have compared the microbiome of these surfaces at four impaction angulations using short-read sequencing of the bacterial 16S rRNA gene: two convergent (horizontal and mesial) and two divergent (distal and vertical) angulations, and in cases where the wisdom tooth is missing. Horizontal angulations exhibited lower microbial diversity than mesial impactions. Amplicon Sequence Variants (ASVs) associated with Veillonella were significantly more abundant at impactions with angulations toward the midline. Using machine learning, a random forest classifier trained to distinguish microbiome profiles was used to predict the native angulations for a subset of samples, with samples from the two convergent impactions estimated with the greatest accuracy.
Differences in microbial diversity were apparent between caries-associated convergent (horizontal and mesial) impacted wisdom teeth, as well as greater abundances of Veillonella ASVs at horizontal impactions.</abstract><cop>England</cop><pmid>36626760</pmid><doi>10.1093/jambio/lxac054</doi><oa>free_for_read</oa></addata></record> |
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source | MEDLINE; Oxford University Press Journals All Titles (1996-Current) |
subjects | Evidence Gaps Humans Molar, Third RNA, Ribosomal, 16S - genetics Tooth, Impacted - complications |
title | Distinct microbiome profiles in convergent wisdom tooth impactions |
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