Numt Parser: Automated identification and removal of nuclear mitochondrial pseudogenes (numts) for accurate mitochondrial genome reconstruction in Panthera

Abstract Nuclear mitochondrial pseudogenes (numts) may hinder the reconstruction of mtDNA genomes and affect the reliability of mtDNA datasets for phylogenetic and population genetic comparisons. Here, we present the program Numt Parser, which allows for the identification of DNA sequences that like...

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Veröffentlicht in:	The Journal of heredity 2023-04, Vol.114 (2), p.120-130
Hauptverfasser:	de Flamingh, Alida, Rivera-Colón, Angel G, Gnoske, Tom P, Kerbis Peterhans, Julian C, Catchen, Julian, Malhi, Ripan S, Roca, Alfred L
Format:	Artikel
Sprache:	eng
Schlagworte:	Animals Cell Nucleus - genetics DNA, Mitochondrial - genetics Genome, Mitochondrial Panthera - genetics Phylogeny Pseudogenes Reproducibility of Results Sequence Analysis, DNA
Online-Zugang:	Volltext
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