HWA-SegNet: Multi-channel skin lesion image segmentation network with hierarchical analysis and weight adjustment
Convolutional neural networks (CNNs) show excellent performance in accurate medical image segmentation. However, the characteristics of sample with small size and insufficient feature expression, irregular shape of the segmented target and inaccurate judgment of edge texture have always been problem...
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description | Convolutional neural networks (CNNs) show excellent performance in accurate medical image segmentation. However, the characteristics of sample with small size and insufficient feature expression, irregular shape of the segmented target and inaccurate judgment of edge texture have always been problems to be faced in the field of skin lesion image segmentation. Therefore, in order to solve these problems, discrete Fourier transform (DFT) is introduced to enrich the input data and a CNN architecture (HWA-SegNet) is proposed in this paper. Firstly, DFT is improved to analyze the features of the skin lesions image, and multi-channel data is extended for each image. Secondly, a hierarchical dilated analysis module is constructed to understand the semantic features under multi-channel. Finally, the pre-prediction results are fine-tuned using a weight adjustment structure with fully connected layers to obtain higher accuracy prediction results. Then, 520 skin lesion images are tested on the ISIC 2018 dataset. Extensive experimental results show that our HWA-SegNet improve the average segmentation Dice Similarity Coefficient from 88.30% to 91.88%, Sensitivity from 89.29% to 92.99%, and Jaccard similarity index from 81.15% to 85.90% compared with U-Net. Compared with the State-of-the-Art method, the Jaccard similarity index and Specificity are close, but the Dice Similarity Coefficient is higher. The experimental data show that the data augmentation strategy based on improved DFT and HWA-SegNet are effective for skin lesion image segmentation. |
doi_str_mv | 10.1016/j.compbiomed.2022.106343 |
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However, the characteristics of sample with small size and insufficient feature expression, irregular shape of the segmented target and inaccurate judgment of edge texture have always been problems to be faced in the field of skin lesion image segmentation. Therefore, in order to solve these problems, discrete Fourier transform (DFT) is introduced to enrich the input data and a CNN architecture (HWA-SegNet) is proposed in this paper. Firstly, DFT is improved to analyze the features of the skin lesions image, and multi-channel data is extended for each image. Secondly, a hierarchical dilated analysis module is constructed to understand the semantic features under multi-channel. Finally, the pre-prediction results are fine-tuned using a weight adjustment structure with fully connected layers to obtain higher accuracy prediction results. Then, 520 skin lesion images are tested on the ISIC 2018 dataset. Extensive experimental results show that our HWA-SegNet improve the average segmentation Dice Similarity Coefficient from 88.30% to 91.88%, Sensitivity from 89.29% to 92.99%, and Jaccard similarity index from 81.15% to 85.90% compared with U-Net. Compared with the State-of-the-Art method, the Jaccard similarity index and Specificity are close, but the Dice Similarity Coefficient is higher. The experimental data show that the data augmentation strategy based on improved DFT and HWA-SegNet are effective for skin lesion image segmentation.</description><identifier>ISSN: 0010-4825</identifier><identifier>EISSN: 1879-0534</identifier><identifier>DOI: 10.1016/j.compbiomed.2022.106343</identifier><identifier>PMID: 36481758</identifier><language>eng</language><publisher>United States: Elsevier Ltd</publisher><subject>Artificial neural networks ; Attention mechanism ; Convolutional neural network ; Deep learning ; Fourier transforms ; Humans ; Image processing ; Image Processing, Computer-Assisted - methods ; Image segmentation ; Information technology ; Lesions ; Medical image segmentation ; Medical imaging ; Multi-scale fusion ; Neural networks ; Neural Networks, Computer ; Skin diseases ; Skin Diseases - diagnostic imaging ; Skin lesions ; Skin tests</subject><ispartof>Computers in biology and medicine, 2023-01, Vol.152, p.106343-106343, Article 106343</ispartof><rights>2022 Elsevier Ltd</rights><rights>Copyright © 2022 Elsevier Ltd. All rights reserved.</rights><rights>2022. Elsevier Ltd</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c402t-949b339705b0ddc72967399dd359ff15b22034da479ab4723c708f291f5cd2703</citedby><cites>FETCH-LOGICAL-c402t-949b339705b0ddc72967399dd359ff15b22034da479ab4723c708f291f5cd2703</cites><orcidid>0000-0003-4842-8754</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0010482522010514$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/36481758$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Han, Qi</creatorcontrib><creatorcontrib>Wang, Hongyi</creatorcontrib><creatorcontrib>Hou, Mingyang</creatorcontrib><creatorcontrib>Weng, Tengfei</creatorcontrib><creatorcontrib>Pei, Yangjun</creatorcontrib><creatorcontrib>Li, Zhong</creatorcontrib><creatorcontrib>Chen, Guorong</creatorcontrib><creatorcontrib>Tian, Yuan</creatorcontrib><creatorcontrib>Qiu, Zicheng</creatorcontrib><title>HWA-SegNet: Multi-channel skin lesion image segmentation network with hierarchical analysis and weight adjustment</title><title>Computers in biology and medicine</title><addtitle>Comput Biol Med</addtitle><description>Convolutional neural networks (CNNs) show excellent performance in accurate medical image segmentation. However, the characteristics of sample with small size and insufficient feature expression, irregular shape of the segmented target and inaccurate judgment of edge texture have always been problems to be faced in the field of skin lesion image segmentation. Therefore, in order to solve these problems, discrete Fourier transform (DFT) is introduced to enrich the input data and a CNN architecture (HWA-SegNet) is proposed in this paper. Firstly, DFT is improved to analyze the features of the skin lesions image, and multi-channel data is extended for each image. Secondly, a hierarchical dilated analysis module is constructed to understand the semantic features under multi-channel. Finally, the pre-prediction results are fine-tuned using a weight adjustment structure with fully connected layers to obtain higher accuracy prediction results. Then, 520 skin lesion images are tested on the ISIC 2018 dataset. Extensive experimental results show that our HWA-SegNet improve the average segmentation Dice Similarity Coefficient from 88.30% to 91.88%, Sensitivity from 89.29% to 92.99%, and Jaccard similarity index from 81.15% to 85.90% compared with U-Net. Compared with the State-of-the-Art method, the Jaccard similarity index and Specificity are close, but the Dice Similarity Coefficient is higher. The experimental data show that the data augmentation strategy based on improved DFT and HWA-SegNet are effective for skin lesion image segmentation.</description><subject>Artificial neural networks</subject><subject>Attention mechanism</subject><subject>Convolutional neural network</subject><subject>Deep learning</subject><subject>Fourier transforms</subject><subject>Humans</subject><subject>Image processing</subject><subject>Image Processing, Computer-Assisted - methods</subject><subject>Image segmentation</subject><subject>Information technology</subject><subject>Lesions</subject><subject>Medical image segmentation</subject><subject>Medical imaging</subject><subject>Multi-scale fusion</subject><subject>Neural networks</subject><subject>Neural Networks, Computer</subject><subject>Skin diseases</subject><subject>Skin Diseases - diagnostic imaging</subject><subject>Skin lesions</subject><subject>Skin tests</subject><issn>0010-4825</issn><issn>1879-0534</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>8G5</sourceid><sourceid>BENPR</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNqFkUtv1DAUhS0EokPhLyBLbNhk8CtxzK5UlCKVdgGIpeXYNxOneUxth1H_fR2mFRIbVr66_o6v7zkIYUq2lNDqQ7-187hv_DyC2zLCWG5XXPBnaENrqQpScvEcbQihpBA1K0_Qqxh7QoggnLxEJ7wSNZVlvUF3l7_Oiu-wu4b0EX9bhuQL25lpggHHWz_hAaKfJ-xHswMcYTfClExaWxOkwxxu8cGnDnceggm289YM2ExmuI8-5sLhA_hdl7Bx_RLTqn6NXrRmiPDm8TxFPy8-_zi_LK5uvnw9P7sqrCAsFUqohnMlSdkQ56xkqpJcKed4qdqWlg1jhAtnhFSmEZJxK0ndMkXb0jomCT9F74_v7sN8t0BMevTRwjCYCeYlaiZLzrNtVZ3Rd_-g_byEvMUfKv-BCcozVR8pG-YYA7R6H7Iv4V5TotdYdK__xqLXWPQxlix9-zhgada7J-FTDhn4dAQgO_I7m6mj9TBZcD6ATdrN_v9THgDNkKMt</recordid><startdate>202301</startdate><enddate>202301</enddate><creator>Han, Qi</creator><creator>Wang, Hongyi</creator><creator>Hou, Mingyang</creator><creator>Weng, Tengfei</creator><creator>Pei, Yangjun</creator><creator>Li, Zhong</creator><creator>Chen, Guorong</creator><creator>Tian, Yuan</creator><creator>Qiu, Zicheng</creator><general>Elsevier Ltd</general><general>Elsevier Limited</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7RV</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AL</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>HCIFZ</scope><scope>JQ2</scope><scope>K7-</scope><scope>K9.</scope><scope>KB0</scope><scope>LK8</scope><scope>M0N</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M7P</scope><scope>M7Z</scope><scope>MBDVC</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0003-4842-8754</orcidid></search><sort><creationdate>202301</creationdate><title>HWA-SegNet: Multi-channel skin lesion image segmentation network with hierarchical analysis and weight adjustment</title><author>Han, Qi ; Wang, Hongyi ; Hou, Mingyang ; Weng, Tengfei ; Pei, Yangjun ; Li, Zhong ; Chen, Guorong ; Tian, Yuan ; Qiu, Zicheng</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c402t-949b339705b0ddc72967399dd359ff15b22034da479ab4723c708f291f5cd2703</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Artificial neural networks</topic><topic>Attention mechanism</topic><topic>Convolutional neural network</topic><topic>Deep learning</topic><topic>Fourier transforms</topic><topic>Humans</topic><topic>Image processing</topic><topic>Image Processing, Computer-Assisted - methods</topic><topic>Image segmentation</topic><topic>Information technology</topic><topic>Lesions</topic><topic>Medical image segmentation</topic><topic>Medical imaging</topic><topic>Multi-scale fusion</topic><topic>Neural networks</topic><topic>Neural Networks, Computer</topic><topic>Skin diseases</topic><topic>Skin Diseases - diagnostic imaging</topic><topic>Skin lesions</topic><topic>Skin tests</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Han, Qi</creatorcontrib><creatorcontrib>Wang, Hongyi</creatorcontrib><creatorcontrib>Hou, Mingyang</creatorcontrib><creatorcontrib>Weng, Tengfei</creatorcontrib><creatorcontrib>Pei, Yangjun</creatorcontrib><creatorcontrib>Li, Zhong</creatorcontrib><creatorcontrib>Chen, Guorong</creatorcontrib><creatorcontrib>Tian, Yuan</creatorcontrib><creatorcontrib>Qiu, Zicheng</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Nursing & Allied Health Database</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Computing Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central UK/Ireland</collection><collection>Advanced Technologies & Aerospace Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Technology Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Computer Science Collection</collection><collection>Computer Science Database</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Nursing & Allied Health Database (Alumni Edition)</collection><collection>Biological Sciences</collection><collection>Computing Database</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>PML(ProQuest Medical Library)</collection><collection>ProQuest research library</collection><collection>Biological Science Database</collection><collection>Biochemistry Abstracts 1</collection><collection>Research Library (Corporate)</collection><collection>Nursing & Allied Health Premium</collection><collection>ProQuest advanced technologies & aerospace journals</collection><collection>ProQuest Advanced Technologies & Aerospace Collection</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><jtitle>Computers in biology and medicine</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Han, Qi</au><au>Wang, Hongyi</au><au>Hou, Mingyang</au><au>Weng, Tengfei</au><au>Pei, Yangjun</au><au>Li, Zhong</au><au>Chen, Guorong</au><au>Tian, Yuan</au><au>Qiu, Zicheng</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>HWA-SegNet: Multi-channel skin lesion image segmentation network with hierarchical analysis and weight adjustment</atitle><jtitle>Computers in biology and medicine</jtitle><addtitle>Comput Biol Med</addtitle><date>2023-01</date><risdate>2023</risdate><volume>152</volume><spage>106343</spage><epage>106343</epage><pages>106343-106343</pages><artnum>106343</artnum><issn>0010-4825</issn><eissn>1879-0534</eissn><abstract>Convolutional neural networks (CNNs) show excellent performance in accurate medical image segmentation. However, the characteristics of sample with small size and insufficient feature expression, irregular shape of the segmented target and inaccurate judgment of edge texture have always been problems to be faced in the field of skin lesion image segmentation. Therefore, in order to solve these problems, discrete Fourier transform (DFT) is introduced to enrich the input data and a CNN architecture (HWA-SegNet) is proposed in this paper. Firstly, DFT is improved to analyze the features of the skin lesions image, and multi-channel data is extended for each image. Secondly, a hierarchical dilated analysis module is constructed to understand the semantic features under multi-channel. Finally, the pre-prediction results are fine-tuned using a weight adjustment structure with fully connected layers to obtain higher accuracy prediction results. Then, 520 skin lesion images are tested on the ISIC 2018 dataset. Extensive experimental results show that our HWA-SegNet improve the average segmentation Dice Similarity Coefficient from 88.30% to 91.88%, Sensitivity from 89.29% to 92.99%, and Jaccard similarity index from 81.15% to 85.90% compared with U-Net. Compared with the State-of-the-Art method, the Jaccard similarity index and Specificity are close, but the Dice Similarity Coefficient is higher. The experimental data show that the data augmentation strategy based on improved DFT and HWA-SegNet are effective for skin lesion image segmentation.</abstract><cop>United States</cop><pub>Elsevier Ltd</pub><pmid>36481758</pmid><doi>10.1016/j.compbiomed.2022.106343</doi><tpages>1</tpages><orcidid>https://orcid.org/0000-0003-4842-8754</orcidid></addata></record> |
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subjects | Artificial neural networks Attention mechanism Convolutional neural network Deep learning Fourier transforms Humans Image processing Image Processing, Computer-Assisted - methods Image segmentation Information technology Lesions Medical image segmentation Medical imaging Multi-scale fusion Neural networks Neural Networks, Computer Skin diseases Skin Diseases - diagnostic imaging Skin lesions Skin tests |
title | HWA-SegNet: Multi-channel skin lesion image segmentation network with hierarchical analysis and weight adjustment |
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