Improving the accuracy of decoding monkey brain–machine interface data by estimating the state of unobserved cell assemblies
The brain–machine interface is a technology that has been used for improving the quality of life of individuals with physical disabilities and also healthy individuals. It is important to improve the methods used for decoding the brain–machine interface data as the accuracy and speed of movements ac...
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Veröffentlicht in: | Journal of neuroscience methods 2023-02, Vol.385, p.109764-109764, Article 109764 |
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container_title | Journal of neuroscience methods |
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creator | Asahina, Takahiro Shimba, Kenta Kotani, Kiyoshi Jimbo, Yasuhiko |
description | The brain–machine interface is a technology that has been used for improving the quality of life of individuals with physical disabilities and also healthy individuals. It is important to improve the methods used for decoding the brain–machine interface data as the accuracy and speed of movements achieved using the existing technology are not comparable to the normal body.
Decoding of brain–machine interface data using the proposed method resulted in improved decoding accuracy compared to the existing method.
The results demonstrated the usefulness of cell assembly state estimation method for decoding the brain–machine interface data.
We incorporated a novel method of estimating cell assembly states using spike trains with the existing decoding method that used only firing rate data. Synaptic connectivity pattern was used as feature values in addition to firing rate. Publicly available monkey brain–machine interface datasets were used in the study.
As long as the decoding was successful, the root mean square error of the proposed method was significantly smaller than the existing method. Artificial neural netowork-based decoding method resulted in more stable decoding, and also improved the decoding accuracy due to incorporation of synaptic connectivity pattern.
•Cell assembly state estimation methods are useful for decoding the brain-machine interface.•Synaptic connectivity from cell assemblies was used as feature value.•Cell assembly estimation increased decoding accuracy.•Cell assembly estimation has linear and nonlinear information regarding kinematic data. |
doi_str_mv | 10.1016/j.jneumeth.2022.109764 |
format | Article |
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Decoding of brain–machine interface data using the proposed method resulted in improved decoding accuracy compared to the existing method.
The results demonstrated the usefulness of cell assembly state estimation method for decoding the brain–machine interface data.
We incorporated a novel method of estimating cell assembly states using spike trains with the existing decoding method that used only firing rate data. Synaptic connectivity pattern was used as feature values in addition to firing rate. Publicly available monkey brain–machine interface datasets were used in the study.
As long as the decoding was successful, the root mean square error of the proposed method was significantly smaller than the existing method. Artificial neural netowork-based decoding method resulted in more stable decoding, and also improved the decoding accuracy due to incorporation of synaptic connectivity pattern.
•Cell assembly state estimation methods are useful for decoding the brain-machine interface.•Synaptic connectivity from cell assemblies was used as feature value.•Cell assembly estimation increased decoding accuracy.•Cell assembly estimation has linear and nonlinear information regarding kinematic data.</description><identifier>ISSN: 0165-0270</identifier><identifier>EISSN: 1872-678X</identifier><identifier>DOI: 10.1016/j.jneumeth.2022.109764</identifier><identifier>PMID: 36476748</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>Action Potentials ; Animals ; Artificial neural network-based decoding ; Brain-Computer Interfaces ; Brain–machine interface ; Cell assembly ; Decoding ; Haplorhini ; Movement ; Quality of Life ; Synaptic connectivity pattern</subject><ispartof>Journal of neuroscience methods, 2023-02, Vol.385, p.109764-109764, Article 109764</ispartof><rights>2022 Elsevier B.V.</rights><rights>Copyright © 2022 Elsevier B.V. All rights reserved.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c429t-9e9e8c3fbb6b0dee79bbaaadc212457dadb97ed69b04071de427f892c6639d2d3</cites><orcidid>0000-0003-3232-941X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0165027022002904$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3536,27903,27904,65309</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/36476748$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Asahina, Takahiro</creatorcontrib><creatorcontrib>Shimba, Kenta</creatorcontrib><creatorcontrib>Kotani, Kiyoshi</creatorcontrib><creatorcontrib>Jimbo, Yasuhiko</creatorcontrib><title>Improving the accuracy of decoding monkey brain–machine interface data by estimating the state of unobserved cell assemblies</title><title>Journal of neuroscience methods</title><addtitle>J Neurosci Methods</addtitle><description>The brain–machine interface is a technology that has been used for improving the quality of life of individuals with physical disabilities and also healthy individuals. It is important to improve the methods used for decoding the brain–machine interface data as the accuracy and speed of movements achieved using the existing technology are not comparable to the normal body.
Decoding of brain–machine interface data using the proposed method resulted in improved decoding accuracy compared to the existing method.
The results demonstrated the usefulness of cell assembly state estimation method for decoding the brain–machine interface data.
We incorporated a novel method of estimating cell assembly states using spike trains with the existing decoding method that used only firing rate data. Synaptic connectivity pattern was used as feature values in addition to firing rate. Publicly available monkey brain–machine interface datasets were used in the study.
As long as the decoding was successful, the root mean square error of the proposed method was significantly smaller than the existing method. Artificial neural netowork-based decoding method resulted in more stable decoding, and also improved the decoding accuracy due to incorporation of synaptic connectivity pattern.
•Cell assembly state estimation methods are useful for decoding the brain-machine interface.•Synaptic connectivity from cell assemblies was used as feature value.•Cell assembly estimation increased decoding accuracy.•Cell assembly estimation has linear and nonlinear information regarding kinematic data.</description><subject>Action Potentials</subject><subject>Animals</subject><subject>Artificial neural network-based decoding</subject><subject>Brain-Computer Interfaces</subject><subject>Brain–machine interface</subject><subject>Cell assembly</subject><subject>Decoding</subject><subject>Haplorhini</subject><subject>Movement</subject><subject>Quality of Life</subject><subject>Synaptic connectivity pattern</subject><issn>0165-0270</issn><issn>1872-678X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkE1OIzEQhS0EgvBzhcjL2XTG7e7Y7R0jBDNIkdiAxM7yTzVxSLvBdkfKBnGHuSEnwa0QtqxKqnr1qt6H0LQks5KU7PdqtvIwdJCWM0oozU3BWX2AJmXDacF483iIJlk4Lwjl5ASdxrgihNSCsGN0UrGaM143E_R2272EfuP8E05LwMqYISizxX2LLZjejoOu98-wxToo5z_e_3fKLJ0H7HyC0CoD2KqksN5iiMl1Ku3NYlIJRqfB9zpC2IDFBtZrrGKETq8dxHN01Kp1hIuveoYebq7vr_4Vi7u_t1d_FoWpqUiFAAGNqVqtmSYWgAutlVLW0JLWc26V1YKDZUKTmvDSQk152whqGKuEpbY6Q792vjns65D_lJ2L4y_KQz9ESfm8qjKpkmUp20lN6GMM0MqXkFOFrSyJHNnLldyzlyN7uWOfF6dfNwbdgf1e28POgsudAHLSjYMgo3HgDVgXwCRpe_fTjU8GUp2a</recordid><startdate>20230201</startdate><enddate>20230201</enddate><creator>Asahina, Takahiro</creator><creator>Shimba, Kenta</creator><creator>Kotani, Kiyoshi</creator><creator>Jimbo, Yasuhiko</creator><general>Elsevier B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0003-3232-941X</orcidid></search><sort><creationdate>20230201</creationdate><title>Improving the accuracy of decoding monkey brain–machine interface data by estimating the state of unobserved cell assemblies</title><author>Asahina, Takahiro ; Shimba, Kenta ; Kotani, Kiyoshi ; Jimbo, Yasuhiko</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c429t-9e9e8c3fbb6b0dee79bbaaadc212457dadb97ed69b04071de427f892c6639d2d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Action Potentials</topic><topic>Animals</topic><topic>Artificial neural network-based decoding</topic><topic>Brain-Computer Interfaces</topic><topic>Brain–machine interface</topic><topic>Cell assembly</topic><topic>Decoding</topic><topic>Haplorhini</topic><topic>Movement</topic><topic>Quality of Life</topic><topic>Synaptic connectivity pattern</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Asahina, Takahiro</creatorcontrib><creatorcontrib>Shimba, Kenta</creatorcontrib><creatorcontrib>Kotani, Kiyoshi</creatorcontrib><creatorcontrib>Jimbo, Yasuhiko</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of neuroscience methods</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Asahina, Takahiro</au><au>Shimba, Kenta</au><au>Kotani, Kiyoshi</au><au>Jimbo, Yasuhiko</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Improving the accuracy of decoding monkey brain–machine interface data by estimating the state of unobserved cell assemblies</atitle><jtitle>Journal of neuroscience methods</jtitle><addtitle>J Neurosci Methods</addtitle><date>2023-02-01</date><risdate>2023</risdate><volume>385</volume><spage>109764</spage><epage>109764</epage><pages>109764-109764</pages><artnum>109764</artnum><issn>0165-0270</issn><eissn>1872-678X</eissn><abstract>The brain–machine interface is a technology that has been used for improving the quality of life of individuals with physical disabilities and also healthy individuals. It is important to improve the methods used for decoding the brain–machine interface data as the accuracy and speed of movements achieved using the existing technology are not comparable to the normal body.
Decoding of brain–machine interface data using the proposed method resulted in improved decoding accuracy compared to the existing method.
The results demonstrated the usefulness of cell assembly state estimation method for decoding the brain–machine interface data.
We incorporated a novel method of estimating cell assembly states using spike trains with the existing decoding method that used only firing rate data. Synaptic connectivity pattern was used as feature values in addition to firing rate. Publicly available monkey brain–machine interface datasets were used in the study.
As long as the decoding was successful, the root mean square error of the proposed method was significantly smaller than the existing method. Artificial neural netowork-based decoding method resulted in more stable decoding, and also improved the decoding accuracy due to incorporation of synaptic connectivity pattern.
•Cell assembly state estimation methods are useful for decoding the brain-machine interface.•Synaptic connectivity from cell assemblies was used as feature value.•Cell assembly estimation increased decoding accuracy.•Cell assembly estimation has linear and nonlinear information regarding kinematic data.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>36476748</pmid><doi>10.1016/j.jneumeth.2022.109764</doi><tpages>1</tpages><orcidid>https://orcid.org/0000-0003-3232-941X</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Action Potentials Animals Artificial neural network-based decoding Brain-Computer Interfaces Brain–machine interface Cell assembly Decoding Haplorhini Movement Quality of Life Synaptic connectivity pattern |
title | Improving the accuracy of decoding monkey brain–machine interface data by estimating the state of unobserved cell assemblies |
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