Limibaculum sediminis sp. nov., isolated from mangrove sediment
A Gram-stain-negative, cream-coloured, aerobic, motile and ovoid- to rod-shaped bacterium, designated as FT325 T , was isolated from mangrove sediment collected in Shenzhen, PR China. The taxonomic position of strain FT325 T was established by phylogenetic, physiological, biochemical and chemotaxono...
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Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2022-01, Vol.72 (10) |
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creator | Huang, Yuhan Liu, Lirui Li, Jiayi Pan, Jie LI, Meng |
description | A Gram-stain-negative, cream-coloured, aerobic, motile and ovoid- to rod-shaped bacterium, designated as FT325
T
, was isolated from mangrove sediment collected in Shenzhen, PR China. The taxonomic position of strain FT325
T
was established by phylogenetic, physiological, biochemical and chemotaxonomic analyses. Strain FT325
T
grew optimally at 37–40 °C and pH 6.0 in the presence of 0 % (w/v) NaCl. Results of 16S rRNA gene sequence analysis showed that strain FT325
T
was most similarly related to
Limibaculum halophilum
CAU 1123
T
(96.2 %),
Phaeovulum vinaykumarii
DSM 18714
T
(93.9%) and
Amaricoccus solimangrovi
HB 172011
T
(93.7 %). The major fatty acids (>10 %) were C
18 : 1
ω
7
c
(60.0 %) and 11-methyl C
18 : 1
ω
7
c
(16.7 %). The sole respiratory quinone was Q-10. The polar lipids were phosphatidylglycerol, one unidentified glycolipid, three unidentified aminolipids and three unidentified phospholipids. Its estimated genome size was 4 318 768 bp and the genomic DNA G+C content was 69.6 mol%. Based on its distinct phenotypic, chemotaxonomic and phylogenetic characteristics, strain FT325
T
represents a novel species of the genus
Limibaculum
, for which the name
Limibaculum sediminis
sp. nov. is proposed (=MCCC 1K07397
T
=KCTC 92313
T
). |
doi_str_mv | 10.1099/ijsem.0.005580 |
format | Article |
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T
, was isolated from mangrove sediment collected in Shenzhen, PR China. The taxonomic position of strain FT325
T
was established by phylogenetic, physiological, biochemical and chemotaxonomic analyses. Strain FT325
T
grew optimally at 37–40 °C and pH 6.0 in the presence of 0 % (w/v) NaCl. Results of 16S rRNA gene sequence analysis showed that strain FT325
T
was most similarly related to
Limibaculum halophilum
CAU 1123
T
(96.2 %),
Phaeovulum vinaykumarii
DSM 18714
T
(93.9%) and
Amaricoccus solimangrovi
HB 172011
T
(93.7 %). The major fatty acids (>10 %) were C
18 : 1
ω
7
c
(60.0 %) and 11-methyl C
18 : 1
ω
7
c
(16.7 %). The sole respiratory quinone was Q-10. The polar lipids were phosphatidylglycerol, one unidentified glycolipid, three unidentified aminolipids and three unidentified phospholipids. Its estimated genome size was 4 318 768 bp and the genomic DNA G+C content was 69.6 mol%. Based on its distinct phenotypic, chemotaxonomic and phylogenetic characteristics, strain FT325
T
represents a novel species of the genus
Limibaculum
, for which the name
Limibaculum sediminis
sp. nov. is proposed (=MCCC 1K07397
T
=KCTC 92313
T
).</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijsem.0.005580</identifier><language>eng</language><ispartof>International journal of systematic and evolutionary microbiology, 2022-01, Vol.72 (10)</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c272t-e95b5eafbbc649075d56daeb714bd3bade8381baaa157c5a3338dbff172fc5343</citedby><cites>FETCH-LOGICAL-c272t-e95b5eafbbc649075d56daeb714bd3bade8381baaa157c5a3338dbff172fc5343</cites><orcidid>0000-0001-8675-0758</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,777,781,3733,27905,27906</link.rule.ids></links><search><creatorcontrib>Huang, Yuhan</creatorcontrib><creatorcontrib>Liu, Lirui</creatorcontrib><creatorcontrib>Li, Jiayi</creatorcontrib><creatorcontrib>Pan, Jie</creatorcontrib><creatorcontrib>LI, Meng</creatorcontrib><title>Limibaculum sediminis sp. nov., isolated from mangrove sediment</title><title>International journal of systematic and evolutionary microbiology</title><description>A Gram-stain-negative, cream-coloured, aerobic, motile and ovoid- to rod-shaped bacterium, designated as FT325
T
, was isolated from mangrove sediment collected in Shenzhen, PR China. The taxonomic position of strain FT325
T
was established by phylogenetic, physiological, biochemical and chemotaxonomic analyses. Strain FT325
T
grew optimally at 37–40 °C and pH 6.0 in the presence of 0 % (w/v) NaCl. Results of 16S rRNA gene sequence analysis showed that strain FT325
T
was most similarly related to
Limibaculum halophilum
CAU 1123
T
(96.2 %),
Phaeovulum vinaykumarii
DSM 18714
T
(93.9%) and
Amaricoccus solimangrovi
HB 172011
T
(93.7 %). The major fatty acids (>10 %) were C
18 : 1
ω
7
c
(60.0 %) and 11-methyl C
18 : 1
ω
7
c
(16.7 %). The sole respiratory quinone was Q-10. The polar lipids were phosphatidylglycerol, one unidentified glycolipid, three unidentified aminolipids and three unidentified phospholipids. Its estimated genome size was 4 318 768 bp and the genomic DNA G+C content was 69.6 mol%. Based on its distinct phenotypic, chemotaxonomic and phylogenetic characteristics, strain FT325
T
represents a novel species of the genus
Limibaculum
, for which the name
Limibaculum sediminis
sp. nov. is proposed (=MCCC 1K07397
T
=KCTC 92313
T
).</description><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><recordid>eNo9kEtLxDAURoMoOI5uXXfpwtabpknblcjgqDDgRtchjxvJ0DZj0g74761WXN0Hh--DQ8g1hYJC2975fcK-gAKA8wZOyIpWQuQcWHX6v5finFyktAeYHwArcr_zvdfKTN3UZwntfA0-ZelQZEM4FreZT6FTI9rMxdBnvRo-YjjiguIwXpIzp7qEV39zTd63j2-b53z3-vSyedjlpqzLMceWa47KaW1E1ULNLRdWoa5ppS3TymLDGqqVUpTXhivGWGO1c7QuneGsYmtys-QeYvicMI2y98lg16kBw5Tk3FKLCgTnM1osqIkhpYhOHqLvVfySFOSPKflrSoJcTLFveeFdzw</recordid><startdate>20220101</startdate><enddate>20220101</enddate><creator>Huang, Yuhan</creator><creator>Liu, Lirui</creator><creator>Li, Jiayi</creator><creator>Pan, Jie</creator><creator>LI, Meng</creator><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0001-8675-0758</orcidid></search><sort><creationdate>20220101</creationdate><title>Limibaculum sediminis sp. nov., isolated from mangrove sediment</title><author>Huang, Yuhan ; Liu, Lirui ; Li, Jiayi ; Pan, Jie ; LI, Meng</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c272t-e95b5eafbbc649075d56daeb714bd3bade8381baaa157c5a3338dbff172fc5343</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Huang, Yuhan</creatorcontrib><creatorcontrib>Liu, Lirui</creatorcontrib><creatorcontrib>Li, Jiayi</creatorcontrib><creatorcontrib>Pan, Jie</creatorcontrib><creatorcontrib>LI, Meng</creatorcontrib><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Huang, Yuhan</au><au>Liu, Lirui</au><au>Li, Jiayi</au><au>Pan, Jie</au><au>LI, Meng</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Limibaculum sediminis sp. nov., isolated from mangrove sediment</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><date>2022-01-01</date><risdate>2022</risdate><volume>72</volume><issue>10</issue><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>A Gram-stain-negative, cream-coloured, aerobic, motile and ovoid- to rod-shaped bacterium, designated as FT325
T
, was isolated from mangrove sediment collected in Shenzhen, PR China. The taxonomic position of strain FT325
T
was established by phylogenetic, physiological, biochemical and chemotaxonomic analyses. Strain FT325
T
grew optimally at 37–40 °C and pH 6.0 in the presence of 0 % (w/v) NaCl. Results of 16S rRNA gene sequence analysis showed that strain FT325
T
was most similarly related to
Limibaculum halophilum
CAU 1123
T
(96.2 %),
Phaeovulum vinaykumarii
DSM 18714
T
(93.9%) and
Amaricoccus solimangrovi
HB 172011
T
(93.7 %). The major fatty acids (>10 %) were C
18 : 1
ω
7
c
(60.0 %) and 11-methyl C
18 : 1
ω
7
c
(16.7 %). The sole respiratory quinone was Q-10. The polar lipids were phosphatidylglycerol, one unidentified glycolipid, three unidentified aminolipids and three unidentified phospholipids. Its estimated genome size was 4 318 768 bp and the genomic DNA G+C content was 69.6 mol%. Based on its distinct phenotypic, chemotaxonomic and phylogenetic characteristics, strain FT325
T
represents a novel species of the genus
Limibaculum
, for which the name
Limibaculum sediminis
sp. nov. is proposed (=MCCC 1K07397
T
=KCTC 92313
T
).</abstract><doi>10.1099/ijsem.0.005580</doi><orcidid>https://orcid.org/0000-0001-8675-0758</orcidid></addata></record> |
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source | Microbiology Society; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Alma/SFX Local Collection |
title | Limibaculum sediminis sp. nov., isolated from mangrove sediment |
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