On the reliability of atoms in molecules, noncovalent index, and natural bond orbital to identify and quantify noncovalent bonds
Atoms in molecules, noncovalent index, and natural bond orbital methods are commonly invoked to identify the presence of various noncovalent bonds and to measure their strength. However, there are numerous instances in the literature where these methods provide contradictory or apparently erroneous...
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Veröffentlicht in: | Journal of computational chemistry 2022-10, Vol.43 (26), p.1814-1824 |
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description | Atoms in molecules, noncovalent index, and natural bond orbital methods are commonly invoked to identify the presence of various noncovalent bonds and to measure their strength. However, there are numerous instances in the literature where these methods provide contradictory or apparently erroneous interpretations of the bonding. The range of reliability of these methods is assessed by calculations of a variety of systems, which include an H‐bond, halogen bond, π‐tetrel bond, CH··HC interaction, and a pairing of two anions. While the results appear to be meaningful for the equilibrium geometries, and those where the two subunits are progressively pulled apart, these techniques erroneously predict a progressively stronger bonding interaction as the two units are compressed and the interaction becomes clearly repulsive. The methods falsely indicate a bonding interaction in the CH··HC arrangement, and incorrectly mimic the behavior of the energy when two anions approach. These approaches are also unreliable for understanding angular deformations.
The most common methods used to identify and quantify noncovalent bonding interactions are Atoms in molecules, noncovalent index, and natural bond orbital. These approaches are tested in the context of a number of systems comprising H‐bond, halogen bond, π‐tetrel bond, CH··HC interaction, and that between a pair of anions. While these methods are appropriate for equilibrium geometries, they tend to fail when the two monomers are brought to repulsive close contact, or if certain angular deformations are imposed. |
doi_str_mv | 10.1002/jcc.26983 |
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The most common methods used to identify and quantify noncovalent bonding interactions are Atoms in molecules, noncovalent index, and natural bond orbital. These approaches are tested in the context of a number of systems comprising H‐bond, halogen bond, π‐tetrel bond, CH··HC interaction, and that between a pair of anions. While these methods are appropriate for equilibrium geometries, they tend to fail when the two monomers are brought to repulsive close contact, or if certain angular deformations are imposed.</description><identifier>ISSN: 0192-8651</identifier><identifier>EISSN: 1096-987X</identifier><identifier>DOI: 10.1002/jcc.26983</identifier><language>eng</language><publisher>Hoboken, USA: John Wiley & Sons, Inc</publisher><subject>Anions ; antielectrostatic ; Bonding strength ; Chemical bonds ; halogen bond ; H··H interaction ; H‐bond ; Reliability analysis ; tetrel bond</subject><ispartof>Journal of computational chemistry, 2022-10, Vol.43 (26), p.1814-1824</ispartof><rights>2022 Wiley Periodicals LLC.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c2603-72ab140f645951ab664187e12598cb0550851759c355d97bc114ff5fad12d3c23</citedby><cites>FETCH-LOGICAL-c2603-72ab140f645951ab664187e12598cb0550851759c355d97bc114ff5fad12d3c23</cites><orcidid>0000-0003-0793-0369</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fjcc.26983$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fjcc.26983$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,777,781,1412,27905,27906,45555,45556</link.rule.ids></links><search><creatorcontrib>Scheiner, Steve</creatorcontrib><title>On the reliability of atoms in molecules, noncovalent index, and natural bond orbital to identify and quantify noncovalent bonds</title><title>Journal of computational chemistry</title><description>Atoms in molecules, noncovalent index, and natural bond orbital methods are commonly invoked to identify the presence of various noncovalent bonds and to measure their strength. However, there are numerous instances in the literature where these methods provide contradictory or apparently erroneous interpretations of the bonding. The range of reliability of these methods is assessed by calculations of a variety of systems, which include an H‐bond, halogen bond, π‐tetrel bond, CH··HC interaction, and a pairing of two anions. While the results appear to be meaningful for the equilibrium geometries, and those where the two subunits are progressively pulled apart, these techniques erroneously predict a progressively stronger bonding interaction as the two units are compressed and the interaction becomes clearly repulsive. The methods falsely indicate a bonding interaction in the CH··HC arrangement, and incorrectly mimic the behavior of the energy when two anions approach. These approaches are also unreliable for understanding angular deformations.
The most common methods used to identify and quantify noncovalent bonding interactions are Atoms in molecules, noncovalent index, and natural bond orbital. These approaches are tested in the context of a number of systems comprising H‐bond, halogen bond, π‐tetrel bond, CH··HC interaction, and that between a pair of anions. While these methods are appropriate for equilibrium geometries, they tend to fail when the two monomers are brought to repulsive close contact, or if certain angular deformations are imposed.</description><subject>Anions</subject><subject>antielectrostatic</subject><subject>Bonding strength</subject><subject>Chemical bonds</subject><subject>halogen bond</subject><subject>H··H interaction</subject><subject>H‐bond</subject><subject>Reliability analysis</subject><subject>tetrel bond</subject><issn>0192-8651</issn><issn>1096-987X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><recordid>eNp10U1LwzAYB_AgCs7pwW8Q8KKwbnlpmuYow1eEXRS8lTRNMSNLtqRVd_Ojm60eRPCS8Ce_5yHwB-AcoylGiMyWSk1JIUp6AEYYiSITJX89BCOEBcnKguFjcBLjEiFEWZGPwNfCwe5Nw6CtkbWxpttC30LZ-VWExsGVt1r1VscJdN4p_y6tdl16afTnBErXQCe7PkgLa5-CD7XpUug8NE2Cpt3u0aaXQ_i9ZDcRT8FRK23UZz_3GLzc3jzP77Onxd3D_PopU6RANONE1jhHbZEzwbCsiyLHJdeYMFGqGjGGSoY5E4oy1gheK4zztmWtbDBpqCJ0DC6HvevgN72OXbUyUWlrpdO-jxXhSHDKaZknevGHLn0fXPpdUphwSst0jMHVoFTwMQbdVutgVjJsK4yqXRdV6qLad5HsbLAfxurt_7B6nM-HiW9xYYtH</recordid><startdate>20221005</startdate><enddate>20221005</enddate><creator>Scheiner, Steve</creator><general>John Wiley & Sons, Inc</general><general>Wiley Subscription Services, Inc</general><scope>AAYXX</scope><scope>CITATION</scope><scope>JQ2</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0003-0793-0369</orcidid></search><sort><creationdate>20221005</creationdate><title>On the reliability of atoms in molecules, noncovalent index, and natural bond orbital to identify and quantify noncovalent bonds</title><author>Scheiner, Steve</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c2603-72ab140f645951ab664187e12598cb0550851759c355d97bc114ff5fad12d3c23</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Anions</topic><topic>antielectrostatic</topic><topic>Bonding strength</topic><topic>Chemical bonds</topic><topic>halogen bond</topic><topic>H··H interaction</topic><topic>H‐bond</topic><topic>Reliability analysis</topic><topic>tetrel bond</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Scheiner, Steve</creatorcontrib><collection>CrossRef</collection><collection>ProQuest Computer Science Collection</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of computational chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Scheiner, Steve</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>On the reliability of atoms in molecules, noncovalent index, and natural bond orbital to identify and quantify noncovalent bonds</atitle><jtitle>Journal of computational chemistry</jtitle><date>2022-10-05</date><risdate>2022</risdate><volume>43</volume><issue>26</issue><spage>1814</spage><epage>1824</epage><pages>1814-1824</pages><issn>0192-8651</issn><eissn>1096-987X</eissn><abstract>Atoms in molecules, noncovalent index, and natural bond orbital methods are commonly invoked to identify the presence of various noncovalent bonds and to measure their strength. However, there are numerous instances in the literature where these methods provide contradictory or apparently erroneous interpretations of the bonding. The range of reliability of these methods is assessed by calculations of a variety of systems, which include an H‐bond, halogen bond, π‐tetrel bond, CH··HC interaction, and a pairing of two anions. While the results appear to be meaningful for the equilibrium geometries, and those where the two subunits are progressively pulled apart, these techniques erroneously predict a progressively stronger bonding interaction as the two units are compressed and the interaction becomes clearly repulsive. The methods falsely indicate a bonding interaction in the CH··HC arrangement, and incorrectly mimic the behavior of the energy when two anions approach. These approaches are also unreliable for understanding angular deformations.
The most common methods used to identify and quantify noncovalent bonding interactions are Atoms in molecules, noncovalent index, and natural bond orbital. These approaches are tested in the context of a number of systems comprising H‐bond, halogen bond, π‐tetrel bond, CH··HC interaction, and that between a pair of anions. While these methods are appropriate for equilibrium geometries, they tend to fail when the two monomers are brought to repulsive close contact, or if certain angular deformations are imposed.</abstract><cop>Hoboken, USA</cop><pub>John Wiley & Sons, Inc</pub><doi>10.1002/jcc.26983</doi><tpages>11</tpages><orcidid>https://orcid.org/0000-0003-0793-0369</orcidid></addata></record> |
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source | Wiley Online Library Journals Frontfile Complete |
subjects | Anions antielectrostatic Bonding strength Chemical bonds halogen bond H··H interaction H‐bond Reliability analysis tetrel bond |
title | On the reliability of atoms in molecules, noncovalent index, and natural bond orbital to identify and quantify noncovalent bonds |
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