Mechanistic Studies for the Rational Design of Multivalent Glycodendrimers
We have synthesized B‐antigen‐displaying dendrimers (16‐mers) with different sizes and evaluated their affinity to their IgM antibody in order to investigate which design features lead to effective multivalency. Unexpectedly, the smallest dendrimer, which cannot chelate the multiple binding sites of...
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Veröffentlicht in: | Chemistry : a European journal 2022-11, Vol.28 (61), p.e202201848-n/a |
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creator | Manabe, Yoshiyuki Tsutsui, Masato Hirao, Kohtaro Kobayashi, Risako Inaba, Hiroshi Matsuura, Kazunori Yoshidome, Daisuke Kabayama, Kazuya Fukase, Koichi |
description | We have synthesized B‐antigen‐displaying dendrimers (16‐mers) with different sizes and evaluated their affinity to their IgM antibody in order to investigate which design features lead to effective multivalency. Unexpectedly, the smallest dendrimer, which cannot chelate the multiple binding sites of IgM, clearly exhibited multivalency, together with an affinity similar to or higher than those of the larger dendrimers. These results indicate that the statistical rebinding model, which involves the rapid exchange of clustered glycans, significantly contributes to the multivalency of glycodendrimers. Namely, in the design of glycodendrimers, high‐density glycan presentation to enhance statistical rebinding should be considered in addition to the ability to chelate multiple binding sites. This notion stands in contrast to the currently prevailing scientific consensus, which prioritizes the chelation model. This study thus provides new and important guidelines for molecular design of glycodendrimers.
Interaction analysis of B antigen 16‐mers (glycodendrimers), which differ with respect to the length of their linkers, with their IgM antibody revealed that the statistical rebinding model, which involves the rapid exchange of clustered glycans, contributes significantly to the multivalency. These results suggest that in addition to the chelation ability, high‐density glycan‐presentation to enhance statistical rebinding should also be taken into consideration in glycodendrimer design. |
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Interaction analysis of B antigen 16‐mers (glycodendrimers), which differ with respect to the length of their linkers, with their IgM antibody revealed that the statistical rebinding model, which involves the rapid exchange of clustered glycans, contributes significantly to the multivalency. These results suggest that in addition to the chelation ability, high‐density glycan‐presentation to enhance statistical rebinding should also be taken into consideration in glycodendrimer design.</description><identifier>ISSN: 0947-6539</identifier><identifier>EISSN: 1521-3765</identifier><identifier>DOI: 10.1002/chem.202201848</identifier><language>eng</language><publisher>Weinheim: Wiley Subscription Services, Inc</publisher><subject>ABO blood type ; Affinity ; Antibodies ; Antigens ; Binding sites ; Chelates ; Chelation ; Chemistry ; dendrimer ; Dendrimers ; Design ; Glycan ; IgM antibody ; Immunoglobulin M ; Mathematical models ; multivalency ; Polysaccharides</subject><ispartof>Chemistry : a European journal, 2022-11, Vol.28 (61), p.e202201848-n/a</ispartof><rights>2022 Wiley‐VCH GmbH</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4568-868405d40b2011d8067139ff3115255aad94b2123742a04c72af2aee6a8b7fc33</citedby><cites>FETCH-LOGICAL-c4568-868405d40b2011d8067139ff3115255aad94b2123742a04c72af2aee6a8b7fc33</cites><orcidid>0000-0002-7658-7827 ; 0000-0001-8844-0710 ; 0000-0001-5472-7860 ; 0000-0002-5515-3923</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fchem.202201848$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fchem.202201848$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,780,784,1417,27923,27924,45573,45574</link.rule.ids></links><search><creatorcontrib>Manabe, Yoshiyuki</creatorcontrib><creatorcontrib>Tsutsui, Masato</creatorcontrib><creatorcontrib>Hirao, Kohtaro</creatorcontrib><creatorcontrib>Kobayashi, Risako</creatorcontrib><creatorcontrib>Inaba, Hiroshi</creatorcontrib><creatorcontrib>Matsuura, Kazunori</creatorcontrib><creatorcontrib>Yoshidome, Daisuke</creatorcontrib><creatorcontrib>Kabayama, Kazuya</creatorcontrib><creatorcontrib>Fukase, Koichi</creatorcontrib><title>Mechanistic Studies for the Rational Design of Multivalent Glycodendrimers</title><title>Chemistry : a European journal</title><description>We have synthesized B‐antigen‐displaying dendrimers (16‐mers) with different sizes and evaluated their affinity to their IgM antibody in order to investigate which design features lead to effective multivalency. Unexpectedly, the smallest dendrimer, which cannot chelate the multiple binding sites of IgM, clearly exhibited multivalency, together with an affinity similar to or higher than those of the larger dendrimers. These results indicate that the statistical rebinding model, which involves the rapid exchange of clustered glycans, significantly contributes to the multivalency of glycodendrimers. Namely, in the design of glycodendrimers, high‐density glycan presentation to enhance statistical rebinding should be considered in addition to the ability to chelate multiple binding sites. This notion stands in contrast to the currently prevailing scientific consensus, which prioritizes the chelation model. This study thus provides new and important guidelines for molecular design of glycodendrimers.
Interaction analysis of B antigen 16‐mers (glycodendrimers), which differ with respect to the length of their linkers, with their IgM antibody revealed that the statistical rebinding model, which involves the rapid exchange of clustered glycans, contributes significantly to the multivalency. These results suggest that in addition to the chelation ability, high‐density glycan‐presentation to enhance statistical rebinding should also be taken into consideration in glycodendrimer design.</description><subject>ABO blood type</subject><subject>Affinity</subject><subject>Antibodies</subject><subject>Antigens</subject><subject>Binding sites</subject><subject>Chelates</subject><subject>Chelation</subject><subject>Chemistry</subject><subject>dendrimer</subject><subject>Dendrimers</subject><subject>Design</subject><subject>Glycan</subject><subject>IgM antibody</subject><subject>Immunoglobulin M</subject><subject>Mathematical models</subject><subject>multivalency</subject><subject>Polysaccharides</subject><issn>0947-6539</issn><issn>1521-3765</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><recordid>eNqFkDtPwzAUhS0EEqWwMltiYUnx2_GICrSgVkg8Zst1bqirNCl2Auq_J1URSCxMd_m-q3MOQueUjCgh7MovYT1ihDFCc5EfoAGVjGZcK3mIBsQInSnJzTE6SWlFCDGK8wF6mINfujqkNnj83HZFgITLJuJ2CfjJtaGpXYVvIIW3GjclnndVGz5cBXWLJ9XWNwXURQxriOkUHZWuSnD2fYfo9e72ZTzNZo-T-_H1LPNCqjzLVS6ILARZ9EFpkROlKTdlyWmfV0rnCiMWjDKuBXNEeM1cyRyAcvlCl57zIbrc_93E5r2D1Np1SB6qytXQdMkyZYRRVOeqRy_-oKumi32jntKSM6kV1z012lM-NilFKO2mb-Ti1lJid9Pa3bT2Z9peMHvhM1Sw_Ye24-nt_Nf9AiSge9g</recordid><startdate>20221102</startdate><enddate>20221102</enddate><creator>Manabe, Yoshiyuki</creator><creator>Tsutsui, Masato</creator><creator>Hirao, Kohtaro</creator><creator>Kobayashi, Risako</creator><creator>Inaba, Hiroshi</creator><creator>Matsuura, Kazunori</creator><creator>Yoshidome, Daisuke</creator><creator>Kabayama, Kazuya</creator><creator>Fukase, Koichi</creator><general>Wiley Subscription Services, Inc</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7SR</scope><scope>8BQ</scope><scope>8FD</scope><scope>JG9</scope><scope>K9.</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-7658-7827</orcidid><orcidid>https://orcid.org/0000-0001-8844-0710</orcidid><orcidid>https://orcid.org/0000-0001-5472-7860</orcidid><orcidid>https://orcid.org/0000-0002-5515-3923</orcidid></search><sort><creationdate>20221102</creationdate><title>Mechanistic Studies for the Rational Design of Multivalent Glycodendrimers</title><author>Manabe, Yoshiyuki ; Tsutsui, Masato ; Hirao, Kohtaro ; Kobayashi, Risako ; Inaba, Hiroshi ; Matsuura, Kazunori ; Yoshidome, Daisuke ; Kabayama, Kazuya ; Fukase, Koichi</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4568-868405d40b2011d8067139ff3115255aad94b2123742a04c72af2aee6a8b7fc33</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>ABO blood type</topic><topic>Affinity</topic><topic>Antibodies</topic><topic>Antigens</topic><topic>Binding sites</topic><topic>Chelates</topic><topic>Chelation</topic><topic>Chemistry</topic><topic>dendrimer</topic><topic>Dendrimers</topic><topic>Design</topic><topic>Glycan</topic><topic>IgM antibody</topic><topic>Immunoglobulin M</topic><topic>Mathematical models</topic><topic>multivalency</topic><topic>Polysaccharides</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Manabe, Yoshiyuki</creatorcontrib><creatorcontrib>Tsutsui, Masato</creatorcontrib><creatorcontrib>Hirao, Kohtaro</creatorcontrib><creatorcontrib>Kobayashi, Risako</creatorcontrib><creatorcontrib>Inaba, Hiroshi</creatorcontrib><creatorcontrib>Matsuura, Kazunori</creatorcontrib><creatorcontrib>Yoshidome, Daisuke</creatorcontrib><creatorcontrib>Kabayama, Kazuya</creatorcontrib><creatorcontrib>Fukase, Koichi</creatorcontrib><collection>CrossRef</collection><collection>Engineered Materials Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Materials Research Database</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>MEDLINE - Academic</collection><jtitle>Chemistry : a European journal</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Manabe, Yoshiyuki</au><au>Tsutsui, Masato</au><au>Hirao, Kohtaro</au><au>Kobayashi, Risako</au><au>Inaba, Hiroshi</au><au>Matsuura, Kazunori</au><au>Yoshidome, Daisuke</au><au>Kabayama, Kazuya</au><au>Fukase, Koichi</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Mechanistic Studies for the Rational Design of Multivalent Glycodendrimers</atitle><jtitle>Chemistry : a European journal</jtitle><date>2022-11-02</date><risdate>2022</risdate><volume>28</volume><issue>61</issue><spage>e202201848</spage><epage>n/a</epage><pages>e202201848-n/a</pages><issn>0947-6539</issn><eissn>1521-3765</eissn><abstract>We have synthesized B‐antigen‐displaying dendrimers (16‐mers) with different sizes and evaluated their affinity to their IgM antibody in order to investigate which design features lead to effective multivalency. Unexpectedly, the smallest dendrimer, which cannot chelate the multiple binding sites of IgM, clearly exhibited multivalency, together with an affinity similar to or higher than those of the larger dendrimers. These results indicate that the statistical rebinding model, which involves the rapid exchange of clustered glycans, significantly contributes to the multivalency of glycodendrimers. Namely, in the design of glycodendrimers, high‐density glycan presentation to enhance statistical rebinding should be considered in addition to the ability to chelate multiple binding sites. This notion stands in contrast to the currently prevailing scientific consensus, which prioritizes the chelation model. This study thus provides new and important guidelines for molecular design of glycodendrimers.
Interaction analysis of B antigen 16‐mers (glycodendrimers), which differ with respect to the length of their linkers, with their IgM antibody revealed that the statistical rebinding model, which involves the rapid exchange of clustered glycans, contributes significantly to the multivalency. These results suggest that in addition to the chelation ability, high‐density glycan‐presentation to enhance statistical rebinding should also be taken into consideration in glycodendrimer design.</abstract><cop>Weinheim</cop><pub>Wiley Subscription Services, Inc</pub><doi>10.1002/chem.202201848</doi><tpages>6</tpages><orcidid>https://orcid.org/0000-0002-7658-7827</orcidid><orcidid>https://orcid.org/0000-0001-8844-0710</orcidid><orcidid>https://orcid.org/0000-0001-5472-7860</orcidid><orcidid>https://orcid.org/0000-0002-5515-3923</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | ABO blood type Affinity Antibodies Antigens Binding sites Chelates Chelation Chemistry dendrimer Dendrimers Design Glycan IgM antibody Immunoglobulin M Mathematical models multivalency Polysaccharides |
title | Mechanistic Studies for the Rational Design of Multivalent Glycodendrimers |
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