Many Common Pathogens are Present in the Operative Room Air During Surgery
The main objective of this study was to assess the sanitary measures of operating theaters using next-generation sequencing. Air was sampled from the operating room for the whole duration of 10 surgical days of “clean” (no infection cases) procedures (6 hip/knee arthroplasty and 4 spine cases). Cont...
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Veröffentlicht in: | The Journal of arthroplasty 2022-12, Vol.37 (12), p.2427-2430 |
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creator | Chisari, Emanuele Largoza, Garrett Clarkson, Samuel Krueger, Chad A. Kirschman, David Parvizi, Javad |
description | The main objective of this study was to assess the sanitary measures of operating theaters using next-generation sequencing.
Air was sampled from the operating room for the whole duration of 10 surgical days of “clean” (no infection cases) procedures (6 hip/knee arthroplasty and 4 spine cases). Controls consisted of samples at the beginning of the day (1 hour before the surgery started) and at the end of the day after terminal cleaning. One additional control sample, consisting of a culture swab that was opened and exposed to the air for 5 seconds, was collected at each time point. All samples were sent for next-generation sequencing analysis (16S rRNA sequencing) for bacterial identification.
Overall, 306 samples were collected (159 controls and 147 experimental). Microbial DNA was detected in only 1 control sample, while 18 (12.2%) experimental samples were positive for microbial DNA. The most common organisms retrieved were Escherichia coli (6/18, 30%), Cutibacterium acnes (3/18, 15%), and Pseudomonas aeruginosa (2/18, 11.1%). There was no difference in positive samples between arthroplasty and spine cases (P > .05).
Microbial organisms are not uncommonly present in the operating room air during hip and knee arthroplasties and spine procedures. |
doi_str_mv | 10.1016/j.arth.2022.07.007 |
format | Article |
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Air was sampled from the operating room for the whole duration of 10 surgical days of “clean” (no infection cases) procedures (6 hip/knee arthroplasty and 4 spine cases). Controls consisted of samples at the beginning of the day (1 hour before the surgery started) and at the end of the day after terminal cleaning. One additional control sample, consisting of a culture swab that was opened and exposed to the air for 5 seconds, was collected at each time point. All samples were sent for next-generation sequencing analysis (16S rRNA sequencing) for bacterial identification.
Overall, 306 samples were collected (159 controls and 147 experimental). Microbial DNA was detected in only 1 control sample, while 18 (12.2%) experimental samples were positive for microbial DNA. The most common organisms retrieved were Escherichia coli (6/18, 30%), Cutibacterium acnes (3/18, 15%), and Pseudomonas aeruginosa (2/18, 11.1%). There was no difference in positive samples between arthroplasty and spine cases (P > .05).
Microbial organisms are not uncommonly present in the operating room air during hip and knee arthroplasties and spine procedures.</description><identifier>ISSN: 0883-5403</identifier><identifier>EISSN: 1532-8406</identifier><identifier>DOI: 10.1016/j.arth.2022.07.007</identifier><identifier>PMID: 35843378</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Arthroplasty, Replacement, Knee ; hip ; Humans ; knee ; Knee Joint ; next-generation sequencing ; operating room ; Operating Rooms ; pathogens ; RNA, Ribosomal, 16S - genetics ; spine</subject><ispartof>The Journal of arthroplasty, 2022-12, Vol.37 (12), p.2427-2430</ispartof><rights>2022 Elsevier Inc.</rights><rights>Copyright © 2022 Elsevier Inc. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c286t-509a2f046adf165b4045c12aa86c1d6dae720e809bc4b76b3fca19f68aea96f3</citedby><cites>FETCH-LOGICAL-c286t-509a2f046adf165b4045c12aa86c1d6dae720e809bc4b76b3fca19f68aea96f3</cites><orcidid>0000-0003-0933-6806 ; 0000-0002-6985-5870</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0883540322006957$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/35843378$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Chisari, Emanuele</creatorcontrib><creatorcontrib>Largoza, Garrett</creatorcontrib><creatorcontrib>Clarkson, Samuel</creatorcontrib><creatorcontrib>Krueger, Chad A.</creatorcontrib><creatorcontrib>Kirschman, David</creatorcontrib><creatorcontrib>Parvizi, Javad</creatorcontrib><title>Many Common Pathogens are Present in the Operative Room Air During Surgery</title><title>The Journal of arthroplasty</title><addtitle>J Arthroplasty</addtitle><description>The main objective of this study was to assess the sanitary measures of operating theaters using next-generation sequencing.
Air was sampled from the operating room for the whole duration of 10 surgical days of “clean” (no infection cases) procedures (6 hip/knee arthroplasty and 4 spine cases). Controls consisted of samples at the beginning of the day (1 hour before the surgery started) and at the end of the day after terminal cleaning. One additional control sample, consisting of a culture swab that was opened and exposed to the air for 5 seconds, was collected at each time point. All samples were sent for next-generation sequencing analysis (16S rRNA sequencing) for bacterial identification.
Overall, 306 samples were collected (159 controls and 147 experimental). Microbial DNA was detected in only 1 control sample, while 18 (12.2%) experimental samples were positive for microbial DNA. The most common organisms retrieved were Escherichia coli (6/18, 30%), Cutibacterium acnes (3/18, 15%), and Pseudomonas aeruginosa (2/18, 11.1%). There was no difference in positive samples between arthroplasty and spine cases (P > .05).
Microbial organisms are not uncommonly present in the operating room air during hip and knee arthroplasties and spine procedures.</description><subject>Arthroplasty, Replacement, Knee</subject><subject>hip</subject><subject>Humans</subject><subject>knee</subject><subject>Knee Joint</subject><subject>next-generation sequencing</subject><subject>operating room</subject><subject>Operating Rooms</subject><subject>pathogens</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>spine</subject><issn>0883-5403</issn><issn>1532-8406</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kMtOwzAQRS0EgvL4ARbISzYJY8dxHIkNKm-BQMDecpxJ66qJi50g9e9JVWDJajbn3qs5hJwySBkwebFITejnKQfOUyhSgGKHTFie8UQJkLtkAkplSS4gOyCHMS4AGMtzsU8OslyJLCvUhDw-m25Np75tfUdfTT_3M-wiNQHpa8CIXU9dR_s50pcVBtO7L6Rv3rf0ygV6PQTXzej7EGYY1sdkrzHLiCc_94h83N58TO-Tp5e7h-nVU2K5kn2SQ2l4A0KaumEyrwSI3DJujJKW1bI2WHBABWVlRVXIKmusYWUjlUFTyiY7Iufb2lXwnwPGXrcuWlwuTYd-iJrLkgk5rsCI8i1qg48xYKNXwbUmrDUDvVGoF3qjUG8Uaij0qHAMnf30D1WL9V_k19kIXG4BHJ_8chh0tA47i7ULaHtde_df_zfoGYIT</recordid><startdate>202212</startdate><enddate>202212</enddate><creator>Chisari, Emanuele</creator><creator>Largoza, Garrett</creator><creator>Clarkson, Samuel</creator><creator>Krueger, Chad A.</creator><creator>Kirschman, David</creator><creator>Parvizi, Javad</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0003-0933-6806</orcidid><orcidid>https://orcid.org/0000-0002-6985-5870</orcidid></search><sort><creationdate>202212</creationdate><title>Many Common Pathogens are Present in the Operative Room Air During Surgery</title><author>Chisari, Emanuele ; Largoza, Garrett ; Clarkson, Samuel ; Krueger, Chad A. ; Kirschman, David ; Parvizi, Javad</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c286t-509a2f046adf165b4045c12aa86c1d6dae720e809bc4b76b3fca19f68aea96f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Arthroplasty, Replacement, Knee</topic><topic>hip</topic><topic>Humans</topic><topic>knee</topic><topic>Knee Joint</topic><topic>next-generation sequencing</topic><topic>operating room</topic><topic>Operating Rooms</topic><topic>pathogens</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>spine</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Chisari, Emanuele</creatorcontrib><creatorcontrib>Largoza, Garrett</creatorcontrib><creatorcontrib>Clarkson, Samuel</creatorcontrib><creatorcontrib>Krueger, Chad A.</creatorcontrib><creatorcontrib>Kirschman, David</creatorcontrib><creatorcontrib>Parvizi, Javad</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>The Journal of arthroplasty</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Chisari, Emanuele</au><au>Largoza, Garrett</au><au>Clarkson, Samuel</au><au>Krueger, Chad A.</au><au>Kirschman, David</au><au>Parvizi, Javad</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Many Common Pathogens are Present in the Operative Room Air During Surgery</atitle><jtitle>The Journal of arthroplasty</jtitle><addtitle>J Arthroplasty</addtitle><date>2022-12</date><risdate>2022</risdate><volume>37</volume><issue>12</issue><spage>2427</spage><epage>2430</epage><pages>2427-2430</pages><issn>0883-5403</issn><eissn>1532-8406</eissn><abstract>The main objective of this study was to assess the sanitary measures of operating theaters using next-generation sequencing.
Air was sampled from the operating room for the whole duration of 10 surgical days of “clean” (no infection cases) procedures (6 hip/knee arthroplasty and 4 spine cases). Controls consisted of samples at the beginning of the day (1 hour before the surgery started) and at the end of the day after terminal cleaning. One additional control sample, consisting of a culture swab that was opened and exposed to the air for 5 seconds, was collected at each time point. All samples were sent for next-generation sequencing analysis (16S rRNA sequencing) for bacterial identification.
Overall, 306 samples were collected (159 controls and 147 experimental). Microbial DNA was detected in only 1 control sample, while 18 (12.2%) experimental samples were positive for microbial DNA. The most common organisms retrieved were Escherichia coli (6/18, 30%), Cutibacterium acnes (3/18, 15%), and Pseudomonas aeruginosa (2/18, 11.1%). There was no difference in positive samples between arthroplasty and spine cases (P > .05).
Microbial organisms are not uncommonly present in the operating room air during hip and knee arthroplasties and spine procedures.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>35843378</pmid><doi>10.1016/j.arth.2022.07.007</doi><tpages>4</tpages><orcidid>https://orcid.org/0000-0003-0933-6806</orcidid><orcidid>https://orcid.org/0000-0002-6985-5870</orcidid></addata></record> |
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source | MEDLINE; Elsevier ScienceDirect Journals |
subjects | Arthroplasty, Replacement, Knee hip Humans knee Knee Joint next-generation sequencing operating room Operating Rooms pathogens RNA, Ribosomal, 16S - genetics spine |
title | Many Common Pathogens are Present in the Operative Room Air During Surgery |
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