Complete mitochondrial genome of Cylindromyia (Calocyptera) intermedia from Guiyang, China, and phylogeny of Phasiinae (Diptera: Tachinidae)
The mitochondrial genome of Cylindromyia (Calocyptera) intermedia (Meigen, 1824) was sequenced and assembled through high-throughput sequencing techniques and reference-based assembly methods. The mitochondrial genome is 15,114 bp in total, consisting of 13 protein-coding genes, 22 transfer RNA gene...
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Veröffentlicht in: | Mitochondrial DNA. Part B. Resources 2022-06, Vol.7 (6), p.1008-1010 |
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description | The mitochondrial genome of Cylindromyia (Calocyptera) intermedia (Meigen, 1824) was sequenced and assembled through high-throughput sequencing techniques and reference-based assembly methods. The mitochondrial genome is 15,114 bp in total, consisting of 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and 1 noncoding control region. The nucleotide composition biases toward A and T; the overall A + T content are up to 76.9% of the entire mitogenome. The result of phylogenetic analysis suggested a close relationship between C. intermedia and subfamily Dexiinae. |
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The mitochondrial genome is 15,114 bp in total, consisting of 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and 1 noncoding control region. The nucleotide composition biases toward A and T; the overall A + T content are up to 76.9% of the entire mitogenome. The result of phylogenetic analysis suggested a close relationship between C. intermedia and subfamily Dexiinae.</description><identifier>ISSN: 2380-2359</identifier><identifier>EISSN: 2380-2359</identifier><identifier>DOI: 10.1080/23802359.2022.2080021</identifier><identifier>PMID: 35756432</identifier><language>eng</language><publisher>Abingdon: Taylor & Francis</publisher><subject>Cylindromyia (Calocyptera) ; Cylindromyia (Calocyptera) intermedia ; Genes ; Genomes ; Laboratories ; Mitochondria ; Mitochondrial DNA ; mitochondrial genome ; Mitogenome Announcement ; Next-generation sequencing ; Phylogenetics ; Phylogeny ; rRNA ; Tachinidae ; Transfer RNA</subject><ispartof>Mitochondrial DNA. Part B. 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The result of phylogenetic analysis suggested a close relationship between C. intermedia and subfamily Dexiinae.</description><subject>Cylindromyia (Calocyptera)</subject><subject>Cylindromyia (Calocyptera) intermedia</subject><subject>Genes</subject><subject>Genomes</subject><subject>Laboratories</subject><subject>Mitochondria</subject><subject>Mitochondrial DNA</subject><subject>mitochondrial genome</subject><subject>Mitogenome Announcement</subject><subject>Next-generation sequencing</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>rRNA</subject><subject>Tachinidae</subject><subject>Transfer RNA</subject><issn>2380-2359</issn><issn>2380-2359</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>0YH</sourceid><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><sourceid>DOA</sourceid><recordid>eNp9ks9u1DAQxiMEotXSR0CyxGUrdYvt2E7MARWlUCpVgkM5WxP_2fUqsRcnC8o78NB1uguiHLh4RjPf_GTNfEXxmuBLgmv8lpY1piWXlxRTmp8aY0qeFadzfTU3nv-VnxRnw7DFGBNRVpWsXhYnJa-4YCU9LX41sd91drSo92PUmxhM8tChtQ2xtyg61Eydz8XYTx7QsoEu6mk32gTnyIcce2tyw2UButn7CcL6AjUbH-ACQTBot5m6mGnTzPq6gcHnlkXLa_8IeYfuQWe1N2DPXxUvHHSDPTvGRfHt08f75vPq7svNbfPhbqUZZ2QFTAsmW6gqg8uWYMJkTYWrKp1z6aTVYAGbmmHrsoRXrqXa1LUTlGDB2nJR3B64JsJW7ZLvIU0qglePhZjWCtLodWeV4ZYSYonk0jDhoC6FpIJVLeMZ2crMen9g7fZtXoW2YUzQPYE-7QS_Uev4Q0lKeUVmwPIISPH73g6j6v2gbddBsHE_KCpqwlgp8vUWxZt_pNu4TyGvKqskIZxizLOKH1Q6xWFI1v35DMFqto_6bR8120cd7ZPnrg5zPriYevgZU2fUCPl-ySUI2g-q_D_iAUwryos</recordid><startdate>20220603</startdate><enddate>20220603</enddate><creator>Wang, Rong</creator><creator>Zhi, Yan</creator><creator>Zhang, Chuntian</creator><creator>Yang, Ming</creator><creator>Liu, Jiayu</creator><general>Taylor & Francis</general><general>Taylor & Francis Ltd</general><general>Taylor & Francis Group</general><scope>0YH</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7XB</scope><scope>8FD</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>M2O</scope><scope>MBDVC</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0002-4765-5237</orcidid><orcidid>https://orcid.org/0000-0003-1826-8139</orcidid><orcidid>https://orcid.org/0000-0002-9514-0502</orcidid></search><sort><creationdate>20220603</creationdate><title>Complete mitochondrial genome of Cylindromyia (Calocyptera) intermedia from Guiyang, China, and phylogeny of Phasiinae (Diptera: Tachinidae)</title><author>Wang, Rong ; 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subjects | Cylindromyia (Calocyptera) Cylindromyia (Calocyptera) intermedia Genes Genomes Laboratories Mitochondria Mitochondrial DNA mitochondrial genome Mitogenome Announcement Next-generation sequencing Phylogenetics Phylogeny rRNA Tachinidae Transfer RNA |
title | Complete mitochondrial genome of Cylindromyia (Calocyptera) intermedia from Guiyang, China, and phylogeny of Phasiinae (Diptera: Tachinidae) |
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