Thermomonas flagellata sp. nov. and Thermomonas alba sp. nov., two novel members of the phylum Pseudomonadota isolated from hot spring sediments

Two novel species, designated strains SYSU G04041 T and SYSU G04536 T , were isolated from hot spring sediments collected in Yunnan, PR China. Phenotypic and chemotaxonomic analyses, and whole-genome sequencing were used to determine the taxonomic positions of the candidate strains. Phylogenetic ana...

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Veröffentlicht in:International journal of systematic and evolutionary microbiology 2022-01, Vol.72 (6)
Hauptverfasser: Liu, Ze-Tao, Dai, Jun-Yi, Lian, Zheng-Han, Liu, Lan, Xian, Wen-Dong, Li, Meng-Meng, Fang, Bao-Zhu, Jiao, Jian-Yu, Li, Wen-Jun
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container_title International journal of systematic and evolutionary microbiology
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creator Liu, Ze-Tao
Dai, Jun-Yi
Lian, Zheng-Han
Liu, Lan
Xian, Wen-Dong
Li, Meng-Meng
Fang, Bao-Zhu
Jiao, Jian-Yu
Li, Wen-Jun
description Two novel species, designated strains SYSU G04041 T and SYSU G04536 T , were isolated from hot spring sediments collected in Yunnan, PR China. Phenotypic and chemotaxonomic analyses, and whole-genome sequencing were used to determine the taxonomic positions of the candidate strains. Phylogenetic analysis using 16S rRNA gene sequence indicated that strain SYSU G04041 T showed the highest sequence similarity to Thermomonas haemolytica A50-7-3 T (97.5 %), and SYSU G04536 T showed the highest sequence similarity to Thermomonas hydrothermalis SGM-6 T (98.2 %). The strains could be differentiated from other species of the genus Thermomonas by their distinct phenotypic and genotypic characteristics. Cells of strains SYSU G04041 T and SYSU G04536 T were aerobic, motile and Gram-stain-negative. Growth both occurred optimally at 45 °C and pH 7.0 for SYSU G04041 T and SYSU G04536 T . In addition, the predominant respiratory quinone in both isolates was ubiquinone Q-8. The major fatty acids (>10 %) of strain SYSU G04041 T were C 16 : 0 , iso-C 15 : 0 and iso-C 16 : 0 , while the major fatty acids (>10 %) of strain SYSU G04536 T were iso-C 15 : 0 and iso-C 16 : 0 . The main detected polar lipids in strains SYSU G04041 T and SYSU G04536 T included phosphatidylethanolamine, diphosphatidylglycerol and phosphatidylglycerol. The G+C contents of the genomic DNA of strains SYSU G04041 T and SYSU G04536 T based on draft genomic sequences were 72.5 and 68.3 %, respectively. On the basis of phenotypic, genotypic and phylogenetic data, strains SYSU G04041 T and SYSU G04536 T represent two novel species of the genus Thermomonas , for which the names Thermomonas flagellata sp. nov. and Thermomonas alba sp. nov. are proposed, with the type strains SYSU G04041 T (=CGMCC 1.19366 T =KCTC 92228 T ) and SYSU G04536 T (=CGMCC 1.19367 T =KCTC 82839 T ), respectively.
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Phenotypic and chemotaxonomic analyses, and whole-genome sequencing were used to determine the taxonomic positions of the candidate strains. Phylogenetic analysis using 16S rRNA gene sequence indicated that strain SYSU G04041 T showed the highest sequence similarity to Thermomonas haemolytica A50-7-3 T (97.5 %), and SYSU G04536 T showed the highest sequence similarity to Thermomonas hydrothermalis SGM-6 T (98.2 %). The strains could be differentiated from other species of the genus Thermomonas by their distinct phenotypic and genotypic characteristics. Cells of strains SYSU G04041 T and SYSU G04536 T were aerobic, motile and Gram-stain-negative. Growth both occurred optimally at 45 °C and pH 7.0 for SYSU G04041 T and SYSU G04536 T . In addition, the predominant respiratory quinone in both isolates was ubiquinone Q-8. The major fatty acids (&gt;10 %) of strain SYSU G04041 T were C 16 : 0 , iso-C 15 : 0 and iso-C 16 : 0 , while the major fatty acids (&gt;10 %) of strain SYSU G04536 T were iso-C 15 : 0 and iso-C 16 : 0 . The main detected polar lipids in strains SYSU G04041 T and SYSU G04536 T included phosphatidylethanolamine, diphosphatidylglycerol and phosphatidylglycerol. The G+C contents of the genomic DNA of strains SYSU G04041 T and SYSU G04536 T based on draft genomic sequences were 72.5 and 68.3 %, respectively. On the basis of phenotypic, genotypic and phylogenetic data, strains SYSU G04041 T and SYSU G04536 T represent two novel species of the genus Thermomonas , for which the names Thermomonas flagellata sp. nov. and Thermomonas alba sp. nov. are proposed, with the type strains SYSU G04041 T (=CGMCC 1.19366 T =KCTC 92228 T ) and SYSU G04536 T (=CGMCC 1.19367 T =KCTC 82839 T ), respectively.</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijsem.0.005444</identifier><language>eng</language><ispartof>International journal of systematic and evolutionary microbiology, 2022-01, Vol.72 (6)</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c272t-78a906a8a5f0f3622d0f90c0b357213179a7422065966537f7469e0e6fcb534b3</citedby><cites>FETCH-LOGICAL-c272t-78a906a8a5f0f3622d0f90c0b357213179a7422065966537f7469e0e6fcb534b3</cites><orcidid>0000-0002-1233-736X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,3733,27901,27902</link.rule.ids></links><search><creatorcontrib>Liu, Ze-Tao</creatorcontrib><creatorcontrib>Dai, Jun-Yi</creatorcontrib><creatorcontrib>Lian, Zheng-Han</creatorcontrib><creatorcontrib>Liu, Lan</creatorcontrib><creatorcontrib>Xian, Wen-Dong</creatorcontrib><creatorcontrib>Li, Meng-Meng</creatorcontrib><creatorcontrib>Fang, Bao-Zhu</creatorcontrib><creatorcontrib>Jiao, Jian-Yu</creatorcontrib><creatorcontrib>Li, Wen-Jun</creatorcontrib><title>Thermomonas flagellata sp. nov. and Thermomonas alba sp. nov., two novel members of the phylum Pseudomonadota isolated from hot spring sediments</title><title>International journal of systematic and evolutionary microbiology</title><description>Two novel species, designated strains SYSU G04041 T and SYSU G04536 T , were isolated from hot spring sediments collected in Yunnan, PR China. Phenotypic and chemotaxonomic analyses, and whole-genome sequencing were used to determine the taxonomic positions of the candidate strains. Phylogenetic analysis using 16S rRNA gene sequence indicated that strain SYSU G04041 T showed the highest sequence similarity to Thermomonas haemolytica A50-7-3 T (97.5 %), and SYSU G04536 T showed the highest sequence similarity to Thermomonas hydrothermalis SGM-6 T (98.2 %). The strains could be differentiated from other species of the genus Thermomonas by their distinct phenotypic and genotypic characteristics. Cells of strains SYSU G04041 T and SYSU G04536 T were aerobic, motile and Gram-stain-negative. Growth both occurred optimally at 45 °C and pH 7.0 for SYSU G04041 T and SYSU G04536 T . In addition, the predominant respiratory quinone in both isolates was ubiquinone Q-8. The major fatty acids (&gt;10 %) of strain SYSU G04041 T were C 16 : 0 , iso-C 15 : 0 and iso-C 16 : 0 , while the major fatty acids (&gt;10 %) of strain SYSU G04536 T were iso-C 15 : 0 and iso-C 16 : 0 . The main detected polar lipids in strains SYSU G04041 T and SYSU G04536 T included phosphatidylethanolamine, diphosphatidylglycerol and phosphatidylglycerol. The G+C contents of the genomic DNA of strains SYSU G04041 T and SYSU G04536 T based on draft genomic sequences were 72.5 and 68.3 %, respectively. On the basis of phenotypic, genotypic and phylogenetic data, strains SYSU G04041 T and SYSU G04536 T represent two novel species of the genus Thermomonas , for which the names Thermomonas flagellata sp. nov. and Thermomonas alba sp. nov. are proposed, with the type strains SYSU G04041 T (=CGMCC 1.19366 T =KCTC 92228 T ) and SYSU G04536 T (=CGMCC 1.19367 T =KCTC 82839 T ), respectively.</description><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><recordid>eNpNkMtOwzAQRS0EEqWwZe0lCxImfqVZooqXVAkWZW05ybhNFcfFTkD9Cz6ZlCJgNVczd45mLiGXGaQZFMVNs4noUkgBpBDiiEwyoVQigYvjX83UKTmLcQMwNgAm5HO5xuC8852J1LZmhW1rekPjNqWdf0-p6Wr632Pa8m96TfsPv1fYUoeuxBCpt7RfI92ud-3g6EvEof5erf2IbaIf8VhTG7yja9-PqNB0Kxqxbhx2fTwnJ9a0ES9-6pS83t8t54_J4vnhaX67SCqWsz7JZ6YAZWZGWrBcMVaDLaCCksucZTzLC5MLxkDJQinJc5sLVSCgslUpuSj5lFwduNvg3waMvXZNrPbfd-iHqJmaZSCUFGy0pgdrFXyMAa0eb3Ym7HQGeh-9_o5egz5Ez78AK5h5Qg</recordid><startdate>20220101</startdate><enddate>20220101</enddate><creator>Liu, Ze-Tao</creator><creator>Dai, Jun-Yi</creator><creator>Lian, Zheng-Han</creator><creator>Liu, Lan</creator><creator>Xian, Wen-Dong</creator><creator>Li, Meng-Meng</creator><creator>Fang, Bao-Zhu</creator><creator>Jiao, Jian-Yu</creator><creator>Li, Wen-Jun</creator><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-1233-736X</orcidid></search><sort><creationdate>20220101</creationdate><title>Thermomonas flagellata sp. nov. and Thermomonas alba sp. nov., two novel members of the phylum Pseudomonadota isolated from hot spring sediments</title><author>Liu, Ze-Tao ; Dai, Jun-Yi ; Lian, Zheng-Han ; Liu, Lan ; Xian, Wen-Dong ; Li, Meng-Meng ; Fang, Bao-Zhu ; Jiao, Jian-Yu ; Li, Wen-Jun</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c272t-78a906a8a5f0f3622d0f90c0b357213179a7422065966537f7469e0e6fcb534b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Liu, Ze-Tao</creatorcontrib><creatorcontrib>Dai, Jun-Yi</creatorcontrib><creatorcontrib>Lian, Zheng-Han</creatorcontrib><creatorcontrib>Liu, Lan</creatorcontrib><creatorcontrib>Xian, Wen-Dong</creatorcontrib><creatorcontrib>Li, Meng-Meng</creatorcontrib><creatorcontrib>Fang, Bao-Zhu</creatorcontrib><creatorcontrib>Jiao, Jian-Yu</creatorcontrib><creatorcontrib>Li, Wen-Jun</creatorcontrib><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Liu, Ze-Tao</au><au>Dai, Jun-Yi</au><au>Lian, Zheng-Han</au><au>Liu, Lan</au><au>Xian, Wen-Dong</au><au>Li, Meng-Meng</au><au>Fang, Bao-Zhu</au><au>Jiao, Jian-Yu</au><au>Li, Wen-Jun</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Thermomonas flagellata sp. nov. and Thermomonas alba sp. nov., two novel members of the phylum Pseudomonadota isolated from hot spring sediments</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><date>2022-01-01</date><risdate>2022</risdate><volume>72</volume><issue>6</issue><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>Two novel species, designated strains SYSU G04041 T and SYSU G04536 T , were isolated from hot spring sediments collected in Yunnan, PR China. Phenotypic and chemotaxonomic analyses, and whole-genome sequencing were used to determine the taxonomic positions of the candidate strains. Phylogenetic analysis using 16S rRNA gene sequence indicated that strain SYSU G04041 T showed the highest sequence similarity to Thermomonas haemolytica A50-7-3 T (97.5 %), and SYSU G04536 T showed the highest sequence similarity to Thermomonas hydrothermalis SGM-6 T (98.2 %). The strains could be differentiated from other species of the genus Thermomonas by their distinct phenotypic and genotypic characteristics. Cells of strains SYSU G04041 T and SYSU G04536 T were aerobic, motile and Gram-stain-negative. Growth both occurred optimally at 45 °C and pH 7.0 for SYSU G04041 T and SYSU G04536 T . In addition, the predominant respiratory quinone in both isolates was ubiquinone Q-8. The major fatty acids (&gt;10 %) of strain SYSU G04041 T were C 16 : 0 , iso-C 15 : 0 and iso-C 16 : 0 , while the major fatty acids (&gt;10 %) of strain SYSU G04536 T were iso-C 15 : 0 and iso-C 16 : 0 . The main detected polar lipids in strains SYSU G04041 T and SYSU G04536 T included phosphatidylethanolamine, diphosphatidylglycerol and phosphatidylglycerol. The G+C contents of the genomic DNA of strains SYSU G04041 T and SYSU G04536 T based on draft genomic sequences were 72.5 and 68.3 %, respectively. On the basis of phenotypic, genotypic and phylogenetic data, strains SYSU G04041 T and SYSU G04536 T represent two novel species of the genus Thermomonas , for which the names Thermomonas flagellata sp. nov. and Thermomonas alba sp. nov. are proposed, with the type strains SYSU G04041 T (=CGMCC 1.19366 T =KCTC 92228 T ) and SYSU G04536 T (=CGMCC 1.19367 T =KCTC 82839 T ), respectively.</abstract><doi>10.1099/ijsem.0.005444</doi><orcidid>https://orcid.org/0000-0002-1233-736X</orcidid></addata></record>
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title Thermomonas flagellata sp. nov. and Thermomonas alba sp. nov., two novel members of the phylum Pseudomonadota isolated from hot spring sediments
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