Umami Peptides Screened Based on Peptidomics and Virtual Screening from Ruditapes philippinarum and Mactra veneriformis Clams
[Display omitted] •Screening method of umami peptides based on peptidomics and virtual screening.•Peptide length and positive control were considered during screening.•His121, Ser146, Ser123, Tyr143 and Gly144 in T1R3 were the main binding sites. The existing technology used for screening umami pept...
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Veröffentlicht in: | Food chemistry 2022-11, Vol.394, p.133504-133504, Article 133504 |
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creator | Zhang, Ting Hua, Ying Zhou, Changyu Xiong, Yongzhao Pan, Daodong Liu, Zhu Dang, Yali |
description | [Display omitted]
•Screening method of umami peptides based on peptidomics and virtual screening.•Peptide length and positive control were considered during screening.•His121, Ser146, Ser123, Tyr143 and Gly144 in T1R3 were the main binding sites.
The existing technology used for screening umami peptides is time-consuming and labor-intensive, making it difficult to meet the requirements of rapid screening of peptides. In this study, a high-throughput screening method for umami peptides was established based on peptidomics and virtual screening including the mass spectrometry, iUmami-SCM, PeptideRanker, and T1R1/T1R3 receptor. Subsequently, they were characterized and validated using sensory evaluation and electronic tongue. Results showed that 18 potential umami peptides were screened from two clams. Among them, 16 peptides had umami characteristics with thresholds range 0.123-1.481 mmol/L, and the accuracy of the screening method was about 88.9%. Additionally, active sites such as Tyr143, Gly144, Ser146, Ala145, His121, Ser123, and Glu277 may play a critical role in flavor presentation by molecular docking with T1R1/T1R3. The paper could provide a fast and reliable method for screening umami peptides as well as lay the foundation for novel strategies for evaluating umami taste. |
doi_str_mv | 10.1016/j.foodchem.2022.133504 |
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•Screening method of umami peptides based on peptidomics and virtual screening.•Peptide length and positive control were considered during screening.•His121, Ser146, Ser123, Tyr143 and Gly144 in T1R3 were the main binding sites.
The existing technology used for screening umami peptides is time-consuming and labor-intensive, making it difficult to meet the requirements of rapid screening of peptides. In this study, a high-throughput screening method for umami peptides was established based on peptidomics and virtual screening including the mass spectrometry, iUmami-SCM, PeptideRanker, and T1R1/T1R3 receptor. Subsequently, they were characterized and validated using sensory evaluation and electronic tongue. Results showed that 18 potential umami peptides were screened from two clams. Among them, 16 peptides had umami characteristics with thresholds range 0.123-1.481 mmol/L, and the accuracy of the screening method was about 88.9%. Additionally, active sites such as Tyr143, Gly144, Ser146, Ala145, His121, Ser123, and Glu277 may play a critical role in flavor presentation by molecular docking with T1R1/T1R3. The paper could provide a fast and reliable method for screening umami peptides as well as lay the foundation for novel strategies for evaluating umami taste.</description><identifier>ISSN: 0308-8146</identifier><identifier>EISSN: 1873-7072</identifier><identifier>DOI: 10.1016/j.foodchem.2022.133504</identifier><language>eng</language><publisher>Elsevier Ltd</publisher><subject>clams ; peptidomics ; screening ; umami peptides ; virtual screening</subject><ispartof>Food chemistry, 2022-11, Vol.394, p.133504-133504, Article 133504</ispartof><rights>2022</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c345t-300f9cc79182addbf0a639a4c8644dd9ea3da9d90c292d8cae6544721da4faf43</citedby><cites>FETCH-LOGICAL-c345t-300f9cc79182addbf0a639a4c8644dd9ea3da9d90c292d8cae6544721da4faf43</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.foodchem.2022.133504$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>315,781,785,3551,27929,27930,46000</link.rule.ids></links><search><creatorcontrib>Zhang, Ting</creatorcontrib><creatorcontrib>Hua, Ying</creatorcontrib><creatorcontrib>Zhou, Changyu</creatorcontrib><creatorcontrib>Xiong, Yongzhao</creatorcontrib><creatorcontrib>Pan, Daodong</creatorcontrib><creatorcontrib>Liu, Zhu</creatorcontrib><creatorcontrib>Dang, Yali</creatorcontrib><title>Umami Peptides Screened Based on Peptidomics and Virtual Screening from Ruditapes philippinarum and Mactra veneriformis Clams</title><title>Food chemistry</title><description>[Display omitted]
•Screening method of umami peptides based on peptidomics and virtual screening.•Peptide length and positive control were considered during screening.•His121, Ser146, Ser123, Tyr143 and Gly144 in T1R3 were the main binding sites.
The existing technology used for screening umami peptides is time-consuming and labor-intensive, making it difficult to meet the requirements of rapid screening of peptides. In this study, a high-throughput screening method for umami peptides was established based on peptidomics and virtual screening including the mass spectrometry, iUmami-SCM, PeptideRanker, and T1R1/T1R3 receptor. Subsequently, they were characterized and validated using sensory evaluation and electronic tongue. Results showed that 18 potential umami peptides were screened from two clams. Among them, 16 peptides had umami characteristics with thresholds range 0.123-1.481 mmol/L, and the accuracy of the screening method was about 88.9%. Additionally, active sites such as Tyr143, Gly144, Ser146, Ala145, His121, Ser123, and Glu277 may play a critical role in flavor presentation by molecular docking with T1R1/T1R3. The paper could provide a fast and reliable method for screening umami peptides as well as lay the foundation for novel strategies for evaluating umami taste.</description><subject>clams</subject><subject>peptidomics</subject><subject>screening</subject><subject>umami peptides</subject><subject>virtual screening</subject><issn>0308-8146</issn><issn>1873-7072</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><recordid>eNqFkE1v1DAQhi0EEkvhLyAfuWQ7_tjEuQErvqQiEKVcrcEeU6_iONhJpR7470272zMXz8Hv-2jmYey1gK0A0Z4ftiFn764pbSVIuRVK7UA_YRthOtV00MmnbAMKTGOEbp-zF7UeAECCMBv27yphivw7TXP0VPmlK0Qjef4e6_rm8fSVU3SV4-j5r1jmBYdTMo5_eCg58R-LjzNOK2K6jkOcpjhiWdJD5Su6uSC_WcElhlxSrHw_YKov2bOAQ6VXp3nGrj5--Ln_3Fx8-_Rl_-6icUrv5kYBhN65rhdGove_A2CretTOtFp73xMqj73vwcleeuOQ2p3WnRQedcCg1Rl7c-ROJf9dqM52XcHRMOBIealWtkaAbkGbNdoeo67kWgsFO5WYsNxaAfbetz3YR9_23rc9-l6Lb49FWg-5iVRsdZFGRz4WcrP1Of4PcQet349M</recordid><startdate>20221115</startdate><enddate>20221115</enddate><creator>Zhang, Ting</creator><creator>Hua, Ying</creator><creator>Zhou, Changyu</creator><creator>Xiong, Yongzhao</creator><creator>Pan, Daodong</creator><creator>Liu, Zhu</creator><creator>Dang, Yali</creator><general>Elsevier Ltd</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20221115</creationdate><title>Umami Peptides Screened Based on Peptidomics and Virtual Screening from Ruditapes philippinarum and Mactra veneriformis Clams</title><author>Zhang, Ting ; Hua, Ying ; Zhou, Changyu ; Xiong, Yongzhao ; Pan, Daodong ; Liu, Zhu ; Dang, Yali</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c345t-300f9cc79182addbf0a639a4c8644dd9ea3da9d90c292d8cae6544721da4faf43</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>clams</topic><topic>peptidomics</topic><topic>screening</topic><topic>umami peptides</topic><topic>virtual screening</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zhang, Ting</creatorcontrib><creatorcontrib>Hua, Ying</creatorcontrib><creatorcontrib>Zhou, Changyu</creatorcontrib><creatorcontrib>Xiong, Yongzhao</creatorcontrib><creatorcontrib>Pan, Daodong</creatorcontrib><creatorcontrib>Liu, Zhu</creatorcontrib><creatorcontrib>Dang, Yali</creatorcontrib><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Food chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zhang, Ting</au><au>Hua, Ying</au><au>Zhou, Changyu</au><au>Xiong, Yongzhao</au><au>Pan, Daodong</au><au>Liu, Zhu</au><au>Dang, Yali</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Umami Peptides Screened Based on Peptidomics and Virtual Screening from Ruditapes philippinarum and Mactra veneriformis Clams</atitle><jtitle>Food chemistry</jtitle><date>2022-11-15</date><risdate>2022</risdate><volume>394</volume><spage>133504</spage><epage>133504</epage><pages>133504-133504</pages><artnum>133504</artnum><issn>0308-8146</issn><eissn>1873-7072</eissn><abstract>[Display omitted]
•Screening method of umami peptides based on peptidomics and virtual screening.•Peptide length and positive control were considered during screening.•His121, Ser146, Ser123, Tyr143 and Gly144 in T1R3 were the main binding sites.
The existing technology used for screening umami peptides is time-consuming and labor-intensive, making it difficult to meet the requirements of rapid screening of peptides. In this study, a high-throughput screening method for umami peptides was established based on peptidomics and virtual screening including the mass spectrometry, iUmami-SCM, PeptideRanker, and T1R1/T1R3 receptor. Subsequently, they were characterized and validated using sensory evaluation and electronic tongue. Results showed that 18 potential umami peptides were screened from two clams. Among them, 16 peptides had umami characteristics with thresholds range 0.123-1.481 mmol/L, and the accuracy of the screening method was about 88.9%. Additionally, active sites such as Tyr143, Gly144, Ser146, Ala145, His121, Ser123, and Glu277 may play a critical role in flavor presentation by molecular docking with T1R1/T1R3. The paper could provide a fast and reliable method for screening umami peptides as well as lay the foundation for novel strategies for evaluating umami taste.</abstract><pub>Elsevier Ltd</pub><doi>10.1016/j.foodchem.2022.133504</doi><tpages>1</tpages></addata></record> |
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subjects | clams peptidomics screening umami peptides virtual screening |
title | Umami Peptides Screened Based on Peptidomics and Virtual Screening from Ruditapes philippinarum and Mactra veneriformis Clams |
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