Rotavirus and adenovirus prevalence in patients with acute viral gastroenteritis in Denizli, Turkey, 2017–2021
This study aims to determine retrospectively the prevalence of rotavirus and enteric adenovirus in patients with gastroenteritis symptoms and the distribution of pathogens by gender, age, seasons, and years. The stool samples sent to Pamukkale University Healthcare Research and Practice Hospital...
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| Veröffentlicht in: | Journal of medical virology 2022-08, Vol.94 (8), p.3857-3862 |
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| creator | Öner, Sedef Zeliha Kaleli̇, İlknur Demi̇r, Melek Mete, Ergun Çalişkan, Ahmet |
| description | This study aims to determine retrospectively the prevalence of rotavirus and enteric adenovirus in patients with gastroenteritis symptoms and the distribution of pathogens by gender, age, seasons, and years. The stool samples sent to Pamukkale University Healthcare Research and Practice Hospital's Medical Microbiology laboratory between January 2017 and December 2021 were evaluated for rotavirus/adenovirus antigen positivity. Rotavirus and adenovirus antigens were studied with the Rotavirus‐Adenovirus Combo Rapid Cassette Test (Acro Biotech) kit. Rotavirus was detected in 683 (8.2%) of the 8315 stool samples evaluated, and 180 (2.2%) samples were positive for adenovirus. Coinfection was detected in 21 (0.25%) samples. Rotavirus was found at the highest rate in 2019 (p = 0.001). The adenovirus was detected in 2020 at a lower rate than in other years (p = 0.0001). The rotavirus was observed at a higher rate in 0– |
| doi_str_mv | 10.1002/jmv.27834 |
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The stool samples sent to Pamukkale University Healthcare Research and Practice Hospital's Medical Microbiology laboratory between January 2017 and December 2021 were evaluated for rotavirus/adenovirus antigen positivity. Rotavirus and adenovirus antigens were studied with the Rotavirus‐Adenovirus Combo Rapid Cassette Test (Acro Biotech) kit. Rotavirus was detected in 683 (8.2%) of the 8315 stool samples evaluated, and 180 (2.2%) samples were positive for adenovirus. Coinfection was detected in 21 (0.25%) samples. Rotavirus was found at the highest rate in 2019 (p = 0.001). The adenovirus was detected in 2020 at a lower rate than in other years (p = 0.0001). The rotavirus was observed at a higher rate in 0–<3, 3–<6, and 6–<13 age groups and adenovirus was detected at a higher rate in 3–<6 and 6–<13 age groups compared to other age groups (p = 0.001, p = 0.003, respectively). The highest rate of incidence of the rotavirus was found in spring and adenovirus in winter. In the etiology of gastroenteritis, especially in children, adenovirus and rotavirus should not be ignored in winter and spring. The prevalence of rotavirus was observed to have decreased in 2020 and onwards, and the prevalence of adenovirus decreased in 2020.</description><identifier>ISSN: 0146-6615</identifier><identifier>EISSN: 1096-9071</identifier><identifier>DOI: 10.1002/jmv.27834</identifier><identifier>PMID: 35510351</identifier><language>eng</language><publisher>United States: Wiley Subscription Services, Inc</publisher><subject>adenovirus ; Adenoviruses ; Age ; Age groups ; Antigens ; change in years ; Etiology ; Gastroenteritis ; Medical research ; Microbiology ; Patients ; prevalence ; Rotavirus ; seasonality ; Spring ; Spring (season) ; Virology ; Viruses ; Winter</subject><ispartof>Journal of medical virology, 2022-08, Vol.94 (8), p.3857-3862</ispartof><rights>2022 Wiley Periodicals LLC.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3534-9183a0838751f13c879674955188def9aae2547057e1be7eee7f0482b1815af3</citedby><cites>FETCH-LOGICAL-c3534-9183a0838751f13c879674955188def9aae2547057e1be7eee7f0482b1815af3</cites><orcidid>0000-0002-1551-9265 ; 0000-0002-1156-3787 ; 0000-0001-9689-8297 ; 0000-0002-0854-2440 ; 0000-0002-9964-2526</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fjmv.27834$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fjmv.27834$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,776,780,1411,27901,27902,45550,45551</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/35510351$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Öner, Sedef Zeliha</creatorcontrib><creatorcontrib>Kaleli̇, İlknur</creatorcontrib><creatorcontrib>Demi̇r, Melek</creatorcontrib><creatorcontrib>Mete, Ergun</creatorcontrib><creatorcontrib>Çalişkan, Ahmet</creatorcontrib><title>Rotavirus and adenovirus prevalence in patients with acute viral gastroenteritis in Denizli, Turkey, 2017–2021</title><title>Journal of medical virology</title><addtitle>J Med Virol</addtitle><description>This study aims to determine retrospectively the prevalence of rotavirus and enteric adenovirus in patients with gastroenteritis symptoms and the distribution of pathogens by gender, age, seasons, and years. The stool samples sent to Pamukkale University Healthcare Research and Practice Hospital's Medical Microbiology laboratory between January 2017 and December 2021 were evaluated for rotavirus/adenovirus antigen positivity. Rotavirus and adenovirus antigens were studied with the Rotavirus‐Adenovirus Combo Rapid Cassette Test (Acro Biotech) kit. Rotavirus was detected in 683 (8.2%) of the 8315 stool samples evaluated, and 180 (2.2%) samples were positive for adenovirus. Coinfection was detected in 21 (0.25%) samples. Rotavirus was found at the highest rate in 2019 (p = 0.001). The adenovirus was detected in 2020 at a lower rate than in other years (p = 0.0001). The rotavirus was observed at a higher rate in 0–<3, 3–<6, and 6–<13 age groups and adenovirus was detected at a higher rate in 3–<6 and 6–<13 age groups compared to other age groups (p = 0.001, p = 0.003, respectively). The highest rate of incidence of the rotavirus was found in spring and adenovirus in winter. In the etiology of gastroenteritis, especially in children, adenovirus and rotavirus should not be ignored in winter and spring. The prevalence of rotavirus was observed to have decreased in 2020 and onwards, and the prevalence of adenovirus decreased in 2020.</description><subject>adenovirus</subject><subject>Adenoviruses</subject><subject>Age</subject><subject>Age groups</subject><subject>Antigens</subject><subject>change in years</subject><subject>Etiology</subject><subject>Gastroenteritis</subject><subject>Medical research</subject><subject>Microbiology</subject><subject>Patients</subject><subject>prevalence</subject><subject>Rotavirus</subject><subject>seasonality</subject><subject>Spring</subject><subject>Spring (season)</subject><subject>Virology</subject><subject>Viruses</subject><subject>Winter</subject><issn>0146-6615</issn><issn>1096-9071</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><recordid>eNp10c9O3DAQBnCralUW2kNfAFnqhUoEZuw4to8V9A8VqFK16jXyZietl2yS2smi5dR34A15EgwBDpV6skb-6dNoPsbeIRwhgDherTdHQhuZv2AzBFtkFjS-ZDPAvMiKAtUO241xBQDGCvGa7UilEKTCGet_dIPb-DBG7told0tqu2nsA21cQ21F3Le8d4Ondoj8yg-_uavGgXhyruG_XBxCl_4o-MHHe3xKrb9u_CGfj-GStodcAOrbvzcCBL5hr2rXRHr7-O6x-edP85Ov2fn3L2cnH8-zSiqZZxaNdGCk0QprlJXRttC5TXsbs6TaOkdC5RqUJlyQJiJdQ27EAg0qV8s9djDF9qH7M1IcyrWPFTWNa6kbYymKAhCEAJXo-3_oqhtDm5ZLSiuLyiqT1IdJVaGLMVBd9sGvXdiWCOV9C2VqoXxoIdn9x8Rxsabls3w6ewLHE7jyDW3_n1R-u_g5Rd4B6LGQgQ</recordid><startdate>202208</startdate><enddate>202208</enddate><creator>Öner, Sedef Zeliha</creator><creator>Kaleli̇, İlknur</creator><creator>Demi̇r, Melek</creator><creator>Mete, Ergun</creator><creator>Çalişkan, Ahmet</creator><general>Wiley Subscription Services, Inc</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7TK</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>K9.</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-1551-9265</orcidid><orcidid>https://orcid.org/0000-0002-1156-3787</orcidid><orcidid>https://orcid.org/0000-0001-9689-8297</orcidid><orcidid>https://orcid.org/0000-0002-0854-2440</orcidid><orcidid>https://orcid.org/0000-0002-9964-2526</orcidid></search><sort><creationdate>202208</creationdate><title>Rotavirus and adenovirus prevalence in patients with acute viral gastroenteritis in Denizli, Turkey, 2017–2021</title><author>Öner, Sedef Zeliha ; Kaleli̇, İlknur ; Demi̇r, Melek ; Mete, Ergun ; Çalişkan, Ahmet</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3534-9183a0838751f13c879674955188def9aae2547057e1be7eee7f0482b1815af3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>adenovirus</topic><topic>Adenoviruses</topic><topic>Age</topic><topic>Age groups</topic><topic>Antigens</topic><topic>change in years</topic><topic>Etiology</topic><topic>Gastroenteritis</topic><topic>Medical research</topic><topic>Microbiology</topic><topic>Patients</topic><topic>prevalence</topic><topic>Rotavirus</topic><topic>seasonality</topic><topic>Spring</topic><topic>Spring (season)</topic><topic>Virology</topic><topic>Viruses</topic><topic>Winter</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Öner, Sedef Zeliha</creatorcontrib><creatorcontrib>Kaleli̇, İlknur</creatorcontrib><creatorcontrib>Demi̇r, Melek</creatorcontrib><creatorcontrib>Mete, Ergun</creatorcontrib><creatorcontrib>Çalişkan, Ahmet</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Neurosciences Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of medical virology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Öner, Sedef Zeliha</au><au>Kaleli̇, İlknur</au><au>Demi̇r, Melek</au><au>Mete, Ergun</au><au>Çalişkan, Ahmet</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Rotavirus and adenovirus prevalence in patients with acute viral gastroenteritis in Denizli, Turkey, 2017–2021</atitle><jtitle>Journal of medical virology</jtitle><addtitle>J Med Virol</addtitle><date>2022-08</date><risdate>2022</risdate><volume>94</volume><issue>8</issue><spage>3857</spage><epage>3862</epage><pages>3857-3862</pages><issn>0146-6615</issn><eissn>1096-9071</eissn><abstract>This study aims to determine retrospectively the prevalence of rotavirus and enteric adenovirus in patients with gastroenteritis symptoms and the distribution of pathogens by gender, age, seasons, and years. The stool samples sent to Pamukkale University Healthcare Research and Practice Hospital's Medical Microbiology laboratory between January 2017 and December 2021 were evaluated for rotavirus/adenovirus antigen positivity. Rotavirus and adenovirus antigens were studied with the Rotavirus‐Adenovirus Combo Rapid Cassette Test (Acro Biotech) kit. Rotavirus was detected in 683 (8.2%) of the 8315 stool samples evaluated, and 180 (2.2%) samples were positive for adenovirus. Coinfection was detected in 21 (0.25%) samples. Rotavirus was found at the highest rate in 2019 (p = 0.001). The adenovirus was detected in 2020 at a lower rate than in other years (p = 0.0001). The rotavirus was observed at a higher rate in 0–<3, 3–<6, and 6–<13 age groups and adenovirus was detected at a higher rate in 3–<6 and 6–<13 age groups compared to other age groups (p = 0.001, p = 0.003, respectively). The highest rate of incidence of the rotavirus was found in spring and adenovirus in winter. In the etiology of gastroenteritis, especially in children, adenovirus and rotavirus should not be ignored in winter and spring. The prevalence of rotavirus was observed to have decreased in 2020 and onwards, and the prevalence of adenovirus decreased in 2020.</abstract><cop>United States</cop><pub>Wiley Subscription Services, Inc</pub><pmid>35510351</pmid><doi>10.1002/jmv.27834</doi><tpages>6</tpages><orcidid>https://orcid.org/0000-0002-1551-9265</orcidid><orcidid>https://orcid.org/0000-0002-1156-3787</orcidid><orcidid>https://orcid.org/0000-0001-9689-8297</orcidid><orcidid>https://orcid.org/0000-0002-0854-2440</orcidid><orcidid>https://orcid.org/0000-0002-9964-2526</orcidid></addata></record> |
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| subjects | adenovirus Adenoviruses Age Age groups Antigens change in years Etiology Gastroenteritis Medical research Microbiology Patients prevalence Rotavirus seasonality Spring Spring (season) Virology Viruses Winter |
| title | Rotavirus and adenovirus prevalence in patients with acute viral gastroenteritis in Denizli, Turkey, 2017–2021 |
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