Oxetane Promise Delivered: Discovery of Long-Acting IDO1 Inhibitors Suitable for Q3W Oral or Parenteral Dosing
3,3-Disubstituted oxetanes have been utilized as bioisosteres for gem-dimethyl and cyclobutane functionalities. We report the discovery of a novel class of oxetane indole-amine 2,3-dioxygenase (IDO1) inhibitors suitable for Q3W (once every 3 weeks) oral and parenteral dosing. A diamide class of IDO...
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container_title | Journal of medicinal chemistry |
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creator | Li, Derun Sloman, David L Achab, Abdelghani Zhou, Hua McGowan, Meredeth A White, Catherine Gibeau, Craig Zhang, Hongjun Pu, Qinglin Bharathan, Indu Hopkins, Brett Liu, Kun Ferguson, Heidi Fradera, Xavier Lesburg, Charles A Martinot, Theodore A Qi, Ji Song, Zhiguo J Yin, Jingjun Zhang, Huangguang Song, Licheng Wan, Baoqiang DAddio, Suzanne Solban, Nicolas Miller, J Richard Zamlynny, Beata Bass, Alan Freeland, Elizabeth Ykoruk, Bridget Hilliard, Catherine Ferraro, Jude Zhai, Jin Knemeyer, Ian Otte, Karin M Vincent, Stella Sciammetta, Nunzio Pasternak, Alexander Bennett, David Jonathan Han, Yongxin |
description | 3,3-Disubstituted oxetanes have been utilized as bioisosteres for gem-dimethyl and cyclobutane functionalities. We report the discovery of a novel class of oxetane indole-amine 2,3-dioxygenase (IDO1) inhibitors suitable for Q3W (once every 3 weeks) oral and parenteral dosing. A diamide class of IDO inhibitors was discovered through an automated ligand identification system (ALIS). Installation of an oxetane and fluorophenyl dramatically improved the potency. Identification of a biaryl moiety as an unconventional amide isostere addressed the metabolic liability of amide hydrolysis. Metabolism identification (Met-ID)-guided target design and the introduction of polarity resulted in the discovery of potent IDO inhibitors with excellent pharmacokinetic (PK) profiles in multiple species. To enable rapid synthesis of the key oxetane intermediate, a novel oxetane ring cyclization was also developed, as well as optimization of a literature route on kg scale. These IDO inhibitors may enable unambiguous proof-of-concept testing for the IDO1 inhibition mechanism for oncology. |
doi_str_mv | 10.1021/acs.jmedchem.1c01670 |
format | Article |
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We report the discovery of a novel class of oxetane indole-amine 2,3-dioxygenase (IDO1) inhibitors suitable for Q3W (once every 3 weeks) oral and parenteral dosing. A diamide class of IDO inhibitors was discovered through an automated ligand identification system (ALIS). Installation of an oxetane and fluorophenyl dramatically improved the potency. Identification of a biaryl moiety as an unconventional amide isostere addressed the metabolic liability of amide hydrolysis. Metabolism identification (Met-ID)-guided target design and the introduction of polarity resulted in the discovery of potent IDO inhibitors with excellent pharmacokinetic (PK) profiles in multiple species. To enable rapid synthesis of the key oxetane intermediate, a novel oxetane ring cyclization was also developed, as well as optimization of a literature route on kg scale. These IDO inhibitors may enable unambiguous proof-of-concept testing for the IDO1 inhibition mechanism for oncology.</description><identifier>ISSN: 0022-2623</identifier><identifier>EISSN: 1520-4804</identifier><identifier>DOI: 10.1021/acs.jmedchem.1c01670</identifier><identifier>PMID: 35239336</identifier><language>eng</language><publisher>United States</publisher><subject>Amides ; Cyclization ; Enzyme Inhibitors - pharmacology ; Ethers, Cyclic ; Indoleamine-Pyrrole 2,3,-Dioxygenase - metabolism</subject><ispartof>Journal of medicinal chemistry, 2022-04, Vol.65 (8), p.6001-6016</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c222t-f6baa1c87bfcf83729967cc7a29fc160462fd6d88dc08a004fc18e24dfe4e42a3</citedby><cites>FETCH-LOGICAL-c222t-f6baa1c87bfcf83729967cc7a29fc160462fd6d88dc08a004fc18e24dfe4e42a3</cites><orcidid>0000-0003-4585-6534 ; 0000-0002-6464-0758 ; 0000-0003-2290-9621 ; 0000-0003-3404-9382 ; 0000-0002-7853-4542 ; 0000-0002-1136-6142 ; 0000-0003-1168-1289 ; 0000-0002-6118-075X ; 0000-0001-7245-7331 ; 0000-0002-3014-035X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,2752,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/35239336$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Li, Derun</creatorcontrib><creatorcontrib>Sloman, David L</creatorcontrib><creatorcontrib>Achab, Abdelghani</creatorcontrib><creatorcontrib>Zhou, Hua</creatorcontrib><creatorcontrib>McGowan, Meredeth A</creatorcontrib><creatorcontrib>White, Catherine</creatorcontrib><creatorcontrib>Gibeau, Craig</creatorcontrib><creatorcontrib>Zhang, Hongjun</creatorcontrib><creatorcontrib>Pu, Qinglin</creatorcontrib><creatorcontrib>Bharathan, Indu</creatorcontrib><creatorcontrib>Hopkins, Brett</creatorcontrib><creatorcontrib>Liu, Kun</creatorcontrib><creatorcontrib>Ferguson, Heidi</creatorcontrib><creatorcontrib>Fradera, Xavier</creatorcontrib><creatorcontrib>Lesburg, Charles A</creatorcontrib><creatorcontrib>Martinot, Theodore A</creatorcontrib><creatorcontrib>Qi, Ji</creatorcontrib><creatorcontrib>Song, Zhiguo J</creatorcontrib><creatorcontrib>Yin, Jingjun</creatorcontrib><creatorcontrib>Zhang, Huangguang</creatorcontrib><creatorcontrib>Song, Licheng</creatorcontrib><creatorcontrib>Wan, Baoqiang</creatorcontrib><creatorcontrib>DAddio, Suzanne</creatorcontrib><creatorcontrib>Solban, Nicolas</creatorcontrib><creatorcontrib>Miller, J Richard</creatorcontrib><creatorcontrib>Zamlynny, Beata</creatorcontrib><creatorcontrib>Bass, Alan</creatorcontrib><creatorcontrib>Freeland, Elizabeth</creatorcontrib><creatorcontrib>Ykoruk, Bridget</creatorcontrib><creatorcontrib>Hilliard, Catherine</creatorcontrib><creatorcontrib>Ferraro, Jude</creatorcontrib><creatorcontrib>Zhai, Jin</creatorcontrib><creatorcontrib>Knemeyer, Ian</creatorcontrib><creatorcontrib>Otte, Karin M</creatorcontrib><creatorcontrib>Vincent, Stella</creatorcontrib><creatorcontrib>Sciammetta, Nunzio</creatorcontrib><creatorcontrib>Pasternak, Alexander</creatorcontrib><creatorcontrib>Bennett, David Jonathan</creatorcontrib><creatorcontrib>Han, Yongxin</creatorcontrib><title>Oxetane Promise Delivered: Discovery of Long-Acting IDO1 Inhibitors Suitable for Q3W Oral or Parenteral Dosing</title><title>Journal of medicinal chemistry</title><addtitle>J Med Chem</addtitle><description>3,3-Disubstituted oxetanes have been utilized as bioisosteres for gem-dimethyl and cyclobutane functionalities. We report the discovery of a novel class of oxetane indole-amine 2,3-dioxygenase (IDO1) inhibitors suitable for Q3W (once every 3 weeks) oral and parenteral dosing. A diamide class of IDO inhibitors was discovered through an automated ligand identification system (ALIS). Installation of an oxetane and fluorophenyl dramatically improved the potency. Identification of a biaryl moiety as an unconventional amide isostere addressed the metabolic liability of amide hydrolysis. Metabolism identification (Met-ID)-guided target design and the introduction of polarity resulted in the discovery of potent IDO inhibitors with excellent pharmacokinetic (PK) profiles in multiple species. To enable rapid synthesis of the key oxetane intermediate, a novel oxetane ring cyclization was also developed, as well as optimization of a literature route on kg scale. These IDO inhibitors may enable unambiguous proof-of-concept testing for the IDO1 inhibition mechanism for oncology.</description><subject>Amides</subject><subject>Cyclization</subject><subject>Enzyme Inhibitors - pharmacology</subject><subject>Ethers, Cyclic</subject><subject>Indoleamine-Pyrrole 2,3,-Dioxygenase - metabolism</subject><issn>0022-2623</issn><issn>1520-4804</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNo9kMtOwzAQRS0EouXxBwh5ySbFHrtOwg4RHpUqtQgQy8hxxjQoicFOEfw9rmhZzfPO6B5CzjibcAb8Upswee-wNivsJtwwrlK2R8Z8CiyRGZP7ZMwYQAIKxIgchfDOGBMcxCEZiSmIXAg1Jv3iGwfdI1161zUBaYFt84Ue6ytaNMG4mP9QZ-nc9W_JtRma_o3OigWns37VVM3gfKBP62bQVYvUOk8fxStdeN3SmC-1x37ATVW4EKUn5MDqNuDpNh6Tl7vb55uHZL64n91czxMDAENiVaU1N1laWWMzkUKeq9SYVENuDVdMKrC1qrOsNizTjMnYzRBkbVGiBC2OycXf3Q_vPtcYhjKaM9i20apbhxKUUFwKkU7jqvxbNd6F4NGWH77ptP8pOSs3pMtIutyRLreko-x8-2Fdxdm_aIdW_ALHM32g</recordid><startdate>20220428</startdate><enddate>20220428</enddate><creator>Li, Derun</creator><creator>Sloman, David L</creator><creator>Achab, Abdelghani</creator><creator>Zhou, Hua</creator><creator>McGowan, Meredeth A</creator><creator>White, Catherine</creator><creator>Gibeau, Craig</creator><creator>Zhang, Hongjun</creator><creator>Pu, Qinglin</creator><creator>Bharathan, Indu</creator><creator>Hopkins, Brett</creator><creator>Liu, Kun</creator><creator>Ferguson, Heidi</creator><creator>Fradera, Xavier</creator><creator>Lesburg, Charles A</creator><creator>Martinot, Theodore A</creator><creator>Qi, Ji</creator><creator>Song, Zhiguo J</creator><creator>Yin, Jingjun</creator><creator>Zhang, Huangguang</creator><creator>Song, Licheng</creator><creator>Wan, Baoqiang</creator><creator>DAddio, Suzanne</creator><creator>Solban, Nicolas</creator><creator>Miller, J Richard</creator><creator>Zamlynny, Beata</creator><creator>Bass, Alan</creator><creator>Freeland, Elizabeth</creator><creator>Ykoruk, Bridget</creator><creator>Hilliard, Catherine</creator><creator>Ferraro, Jude</creator><creator>Zhai, Jin</creator><creator>Knemeyer, Ian</creator><creator>Otte, Karin M</creator><creator>Vincent, Stella</creator><creator>Sciammetta, Nunzio</creator><creator>Pasternak, Alexander</creator><creator>Bennett, David Jonathan</creator><creator>Han, Yongxin</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0003-4585-6534</orcidid><orcidid>https://orcid.org/0000-0002-6464-0758</orcidid><orcidid>https://orcid.org/0000-0003-2290-9621</orcidid><orcidid>https://orcid.org/0000-0003-3404-9382</orcidid><orcidid>https://orcid.org/0000-0002-7853-4542</orcidid><orcidid>https://orcid.org/0000-0002-1136-6142</orcidid><orcidid>https://orcid.org/0000-0003-1168-1289</orcidid><orcidid>https://orcid.org/0000-0002-6118-075X</orcidid><orcidid>https://orcid.org/0000-0001-7245-7331</orcidid><orcidid>https://orcid.org/0000-0002-3014-035X</orcidid></search><sort><creationdate>20220428</creationdate><title>Oxetane Promise Delivered: Discovery of Long-Acting IDO1 Inhibitors Suitable for Q3W Oral or Parenteral Dosing</title><author>Li, Derun ; Sloman, David L ; Achab, Abdelghani ; Zhou, Hua ; McGowan, Meredeth A ; White, Catherine ; Gibeau, Craig ; Zhang, Hongjun ; Pu, Qinglin ; Bharathan, Indu ; Hopkins, Brett ; Liu, Kun ; Ferguson, Heidi ; Fradera, Xavier ; Lesburg, Charles A ; Martinot, Theodore A ; Qi, Ji ; Song, Zhiguo J ; Yin, Jingjun ; Zhang, Huangguang ; Song, Licheng ; Wan, Baoqiang ; DAddio, Suzanne ; Solban, Nicolas ; Miller, J Richard ; Zamlynny, Beata ; Bass, Alan ; Freeland, Elizabeth ; Ykoruk, Bridget ; Hilliard, Catherine ; Ferraro, Jude ; Zhai, Jin ; Knemeyer, Ian ; Otte, Karin M ; Vincent, Stella ; Sciammetta, Nunzio ; Pasternak, Alexander ; Bennett, David Jonathan ; Han, Yongxin</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c222t-f6baa1c87bfcf83729967cc7a29fc160462fd6d88dc08a004fc18e24dfe4e42a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Amides</topic><topic>Cyclization</topic><topic>Enzyme Inhibitors - pharmacology</topic><topic>Ethers, Cyclic</topic><topic>Indoleamine-Pyrrole 2,3,-Dioxygenase - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Li, Derun</creatorcontrib><creatorcontrib>Sloman, David L</creatorcontrib><creatorcontrib>Achab, Abdelghani</creatorcontrib><creatorcontrib>Zhou, Hua</creatorcontrib><creatorcontrib>McGowan, Meredeth A</creatorcontrib><creatorcontrib>White, Catherine</creatorcontrib><creatorcontrib>Gibeau, Craig</creatorcontrib><creatorcontrib>Zhang, Hongjun</creatorcontrib><creatorcontrib>Pu, Qinglin</creatorcontrib><creatorcontrib>Bharathan, Indu</creatorcontrib><creatorcontrib>Hopkins, Brett</creatorcontrib><creatorcontrib>Liu, Kun</creatorcontrib><creatorcontrib>Ferguson, Heidi</creatorcontrib><creatorcontrib>Fradera, Xavier</creatorcontrib><creatorcontrib>Lesburg, Charles A</creatorcontrib><creatorcontrib>Martinot, Theodore A</creatorcontrib><creatorcontrib>Qi, Ji</creatorcontrib><creatorcontrib>Song, Zhiguo J</creatorcontrib><creatorcontrib>Yin, Jingjun</creatorcontrib><creatorcontrib>Zhang, Huangguang</creatorcontrib><creatorcontrib>Song, Licheng</creatorcontrib><creatorcontrib>Wan, Baoqiang</creatorcontrib><creatorcontrib>DAddio, Suzanne</creatorcontrib><creatorcontrib>Solban, Nicolas</creatorcontrib><creatorcontrib>Miller, J Richard</creatorcontrib><creatorcontrib>Zamlynny, Beata</creatorcontrib><creatorcontrib>Bass, Alan</creatorcontrib><creatorcontrib>Freeland, Elizabeth</creatorcontrib><creatorcontrib>Ykoruk, Bridget</creatorcontrib><creatorcontrib>Hilliard, Catherine</creatorcontrib><creatorcontrib>Ferraro, Jude</creatorcontrib><creatorcontrib>Zhai, Jin</creatorcontrib><creatorcontrib>Knemeyer, Ian</creatorcontrib><creatorcontrib>Otte, Karin M</creatorcontrib><creatorcontrib>Vincent, Stella</creatorcontrib><creatorcontrib>Sciammetta, Nunzio</creatorcontrib><creatorcontrib>Pasternak, Alexander</creatorcontrib><creatorcontrib>Bennett, David Jonathan</creatorcontrib><creatorcontrib>Han, Yongxin</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of medicinal chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Li, Derun</au><au>Sloman, David L</au><au>Achab, Abdelghani</au><au>Zhou, Hua</au><au>McGowan, Meredeth A</au><au>White, Catherine</au><au>Gibeau, Craig</au><au>Zhang, Hongjun</au><au>Pu, Qinglin</au><au>Bharathan, Indu</au><au>Hopkins, Brett</au><au>Liu, Kun</au><au>Ferguson, Heidi</au><au>Fradera, Xavier</au><au>Lesburg, Charles A</au><au>Martinot, Theodore A</au><au>Qi, Ji</au><au>Song, Zhiguo J</au><au>Yin, Jingjun</au><au>Zhang, Huangguang</au><au>Song, Licheng</au><au>Wan, Baoqiang</au><au>DAddio, Suzanne</au><au>Solban, Nicolas</au><au>Miller, J Richard</au><au>Zamlynny, Beata</au><au>Bass, Alan</au><au>Freeland, Elizabeth</au><au>Ykoruk, Bridget</au><au>Hilliard, Catherine</au><au>Ferraro, Jude</au><au>Zhai, Jin</au><au>Knemeyer, Ian</au><au>Otte, Karin M</au><au>Vincent, Stella</au><au>Sciammetta, Nunzio</au><au>Pasternak, Alexander</au><au>Bennett, David Jonathan</au><au>Han, Yongxin</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Oxetane Promise Delivered: Discovery of Long-Acting IDO1 Inhibitors Suitable for Q3W Oral or Parenteral Dosing</atitle><jtitle>Journal of medicinal chemistry</jtitle><addtitle>J Med Chem</addtitle><date>2022-04-28</date><risdate>2022</risdate><volume>65</volume><issue>8</issue><spage>6001</spage><epage>6016</epage><pages>6001-6016</pages><issn>0022-2623</issn><eissn>1520-4804</eissn><abstract>3,3-Disubstituted oxetanes have been utilized as bioisosteres for gem-dimethyl and cyclobutane functionalities. We report the discovery of a novel class of oxetane indole-amine 2,3-dioxygenase (IDO1) inhibitors suitable for Q3W (once every 3 weeks) oral and parenteral dosing. A diamide class of IDO inhibitors was discovered through an automated ligand identification system (ALIS). Installation of an oxetane and fluorophenyl dramatically improved the potency. Identification of a biaryl moiety as an unconventional amide isostere addressed the metabolic liability of amide hydrolysis. Metabolism identification (Met-ID)-guided target design and the introduction of polarity resulted in the discovery of potent IDO inhibitors with excellent pharmacokinetic (PK) profiles in multiple species. To enable rapid synthesis of the key oxetane intermediate, a novel oxetane ring cyclization was also developed, as well as optimization of a literature route on kg scale. 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subjects | Amides Cyclization Enzyme Inhibitors - pharmacology Ethers, Cyclic Indoleamine-Pyrrole 2,3,-Dioxygenase - metabolism |
title | Oxetane Promise Delivered: Discovery of Long-Acting IDO1 Inhibitors Suitable for Q3W Oral or Parenteral Dosing |
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