Advancing the Adverse Outcome Pathway for PPARγ Inactivation Leading to Pulmonary Fibrosis Using Bradford-Hill Consideration and the Comparative Toxicogenomics Database

Pulmonary fibrosis is regulated by transforming growth factor-β (TGF-β) and peroxisome proliferator-activated receptor-gamma (PPARγ). An adverse outcome pathway (AOP) for PPARγ inactivation leading to pulmonary fibrosis has been previously developed. To advance the development of this AOP, the confi...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Chemical research in toxicology 2022-02, Vol.35 (2), p.233-243
Hauptverfasser: Jeong, Jaeseong, Choi, Jinhee
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 243
container_issue 2
container_start_page 233
container_title Chemical research in toxicology
container_volume 35
creator Jeong, Jaeseong
Choi, Jinhee
description Pulmonary fibrosis is regulated by transforming growth factor-β (TGF-β) and peroxisome proliferator-activated receptor-gamma (PPARγ). An adverse outcome pathway (AOP) for PPARγ inactivation leading to pulmonary fibrosis has been previously developed. To advance the development of this AOP, the confidence of the overall AOP was assessed using the Bradford-Hill considerations as per the recommendations from the Organisation for Economic Co-operation and Development (OECD) Users’ Handbook. Overall, the essentiality of key events (KEs) and the biological plausibility of key event relationships (KERs) were rated high. In contrast, the empirical support of KERs was found to be moderate. To experimentally evaluate the KERs from the molecular initiating event (MIE) and KE1, PPARγ (MIE) and TGF-β (KE1) inhibitors were used to examine the effects of downstream events following inhibition of their upstream events. PPARγ inhibition (MIE) led to TGF-β activation (KE1), upregulation in vimentin expression (KE3), and an increase in the fibronectin level (KE4). Similarly, activated TGF-β (KE1) led to an increase in vimentin (KE3) and fibronectin expression (KE4). In the database analysis using the Comparative Toxicogenomics Database, 31 genes related to each KE were found to be highly correlated with pulmonary fibrosis, and the top 21 potential stressors were suggested. The AOP for pulmonary fibrosis evaluated in this study will be the basis for the screening of inhaled toxic substances in the environment.
doi_str_mv 10.1021/acs.chemrestox.1c00257
format Article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_2628299370</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2628299370</sourcerecordid><originalsourceid>FETCH-LOGICAL-a269t-e8ffae265dbe698f2bc96a52aa60349cb482083eedf4b7f56f9d2cf3069d2a563</originalsourceid><addsrcrecordid>eNqFkc9uEzEQxi0EoqHwCpWPXDb1n6yzewyhpZUiNUKtxG01a48bV7t2sHdD-0iceY8-E04T4MhpZM_3-0YzHyFnnE05E_wcdJrqDfYR0xAep1wzJsr5KzLhpWBFyTh7TSasqmUhRPXthLxL6YExntn5W3IiSz6TXMkJ-bkwO_Da-Xs6bJDmF8aE9GYcdOiRrmHY_IAnakOk6_Xi6_Mveu1BD24HgwuerhDMCxvoeuz64CE-0UvXxpBcondp3_sUwWTeFFeu6-gy-OQMxgMP3rzMXYZ-C_u_HdLb8Oh0uEcfeqcT_QwDtJDwPXljoUv44VhPyd3lxe3yqljdfLleLlYFCFUPBVbWAgpVmhZVXVnR6lpBKQAUk7Nat7NKsEoiGjtr57ZUtjZCW8lUrlAqeUo-Hny3MXwf83mb3iWNXQcew5gaoUQl6lrOWZaqg1TnfVNE22yj6_MJGs6afUxNjqn5F1NzjCmDZ8cZY9uj-Yv9ySULxEGwN3gIY_R55f-5_gYJ_qkq</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2628299370</pqid></control><display><type>article</type><title>Advancing the Adverse Outcome Pathway for PPARγ Inactivation Leading to Pulmonary Fibrosis Using Bradford-Hill Consideration and the Comparative Toxicogenomics Database</title><source>MEDLINE</source><source>American Chemical Society Journals</source><creator>Jeong, Jaeseong ; Choi, Jinhee</creator><creatorcontrib>Jeong, Jaeseong ; Choi, Jinhee</creatorcontrib><description>Pulmonary fibrosis is regulated by transforming growth factor-β (TGF-β) and peroxisome proliferator-activated receptor-gamma (PPARγ). An adverse outcome pathway (AOP) for PPARγ inactivation leading to pulmonary fibrosis has been previously developed. To advance the development of this AOP, the confidence of the overall AOP was assessed using the Bradford-Hill considerations as per the recommendations from the Organisation for Economic Co-operation and Development (OECD) Users’ Handbook. Overall, the essentiality of key events (KEs) and the biological plausibility of key event relationships (KERs) were rated high. In contrast, the empirical support of KERs was found to be moderate. To experimentally evaluate the KERs from the molecular initiating event (MIE) and KE1, PPARγ (MIE) and TGF-β (KE1) inhibitors were used to examine the effects of downstream events following inhibition of their upstream events. PPARγ inhibition (MIE) led to TGF-β activation (KE1), upregulation in vimentin expression (KE3), and an increase in the fibronectin level (KE4). Similarly, activated TGF-β (KE1) led to an increase in vimentin (KE3) and fibronectin expression (KE4). In the database analysis using the Comparative Toxicogenomics Database, 31 genes related to each KE were found to be highly correlated with pulmonary fibrosis, and the top 21 potential stressors were suggested. The AOP for pulmonary fibrosis evaluated in this study will be the basis for the screening of inhaled toxic substances in the environment.</description><identifier>ISSN: 0893-228X</identifier><identifier>EISSN: 1520-5010</identifier><identifier>DOI: 10.1021/acs.chemrestox.1c00257</identifier><identifier>PMID: 35143163</identifier><language>eng</language><publisher>United States: American Chemical Society</publisher><subject>Adverse Outcome Pathways ; Cell Survival - drug effects ; Cells, Cultured ; Databases, Factual ; Humans ; PPAR gamma - agonists ; PPAR gamma - antagonists &amp; inhibitors ; PPAR gamma - metabolism ; Pulmonary Fibrosis - chemically induced ; Pulmonary Fibrosis - metabolism ; Toxicogenetics ; Troglitazone - adverse effects</subject><ispartof>Chemical research in toxicology, 2022-02, Vol.35 (2), p.233-243</ispartof><rights>2022 American Chemical Society</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a269t-e8ffae265dbe698f2bc96a52aa60349cb482083eedf4b7f56f9d2cf3069d2a563</citedby><cites>FETCH-LOGICAL-a269t-e8ffae265dbe698f2bc96a52aa60349cb482083eedf4b7f56f9d2cf3069d2a563</cites><orcidid>0000-0003-3393-7505</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://pubs.acs.org/doi/pdf/10.1021/acs.chemrestox.1c00257$$EPDF$$P50$$Gacs$$H</linktopdf><linktohtml>$$Uhttps://pubs.acs.org/doi/10.1021/acs.chemrestox.1c00257$$EHTML$$P50$$Gacs$$H</linktohtml><link.rule.ids>314,780,784,2765,27076,27924,27925,56738,56788</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/35143163$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Jeong, Jaeseong</creatorcontrib><creatorcontrib>Choi, Jinhee</creatorcontrib><title>Advancing the Adverse Outcome Pathway for PPARγ Inactivation Leading to Pulmonary Fibrosis Using Bradford-Hill Consideration and the Comparative Toxicogenomics Database</title><title>Chemical research in toxicology</title><addtitle>Chem. Res. Toxicol</addtitle><description>Pulmonary fibrosis is regulated by transforming growth factor-β (TGF-β) and peroxisome proliferator-activated receptor-gamma (PPARγ). An adverse outcome pathway (AOP) for PPARγ inactivation leading to pulmonary fibrosis has been previously developed. To advance the development of this AOP, the confidence of the overall AOP was assessed using the Bradford-Hill considerations as per the recommendations from the Organisation for Economic Co-operation and Development (OECD) Users’ Handbook. Overall, the essentiality of key events (KEs) and the biological plausibility of key event relationships (KERs) were rated high. In contrast, the empirical support of KERs was found to be moderate. To experimentally evaluate the KERs from the molecular initiating event (MIE) and KE1, PPARγ (MIE) and TGF-β (KE1) inhibitors were used to examine the effects of downstream events following inhibition of their upstream events. PPARγ inhibition (MIE) led to TGF-β activation (KE1), upregulation in vimentin expression (KE3), and an increase in the fibronectin level (KE4). Similarly, activated TGF-β (KE1) led to an increase in vimentin (KE3) and fibronectin expression (KE4). In the database analysis using the Comparative Toxicogenomics Database, 31 genes related to each KE were found to be highly correlated with pulmonary fibrosis, and the top 21 potential stressors were suggested. The AOP for pulmonary fibrosis evaluated in this study will be the basis for the screening of inhaled toxic substances in the environment.</description><subject>Adverse Outcome Pathways</subject><subject>Cell Survival - drug effects</subject><subject>Cells, Cultured</subject><subject>Databases, Factual</subject><subject>Humans</subject><subject>PPAR gamma - agonists</subject><subject>PPAR gamma - antagonists &amp; inhibitors</subject><subject>PPAR gamma - metabolism</subject><subject>Pulmonary Fibrosis - chemically induced</subject><subject>Pulmonary Fibrosis - metabolism</subject><subject>Toxicogenetics</subject><subject>Troglitazone - adverse effects</subject><issn>0893-228X</issn><issn>1520-5010</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkc9uEzEQxi0EoqHwCpWPXDb1n6yzewyhpZUiNUKtxG01a48bV7t2sHdD-0iceY8-E04T4MhpZM_3-0YzHyFnnE05E_wcdJrqDfYR0xAep1wzJsr5KzLhpWBFyTh7TSasqmUhRPXthLxL6YExntn5W3IiSz6TXMkJ-bkwO_Da-Xs6bJDmF8aE9GYcdOiRrmHY_IAnakOk6_Xi6_Mveu1BD24HgwuerhDMCxvoeuz64CE-0UvXxpBcondp3_sUwWTeFFeu6-gy-OQMxgMP3rzMXYZ-C_u_HdLb8Oh0uEcfeqcT_QwDtJDwPXljoUv44VhPyd3lxe3yqljdfLleLlYFCFUPBVbWAgpVmhZVXVnR6lpBKQAUk7Nat7NKsEoiGjtr57ZUtjZCW8lUrlAqeUo-Hny3MXwf83mb3iWNXQcew5gaoUQl6lrOWZaqg1TnfVNE22yj6_MJGs6afUxNjqn5F1NzjCmDZ8cZY9uj-Yv9ySULxEGwN3gIY_R55f-5_gYJ_qkq</recordid><startdate>20220221</startdate><enddate>20220221</enddate><creator>Jeong, Jaeseong</creator><creator>Choi, Jinhee</creator><general>American Chemical Society</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0003-3393-7505</orcidid></search><sort><creationdate>20220221</creationdate><title>Advancing the Adverse Outcome Pathway for PPARγ Inactivation Leading to Pulmonary Fibrosis Using Bradford-Hill Consideration and the Comparative Toxicogenomics Database</title><author>Jeong, Jaeseong ; Choi, Jinhee</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a269t-e8ffae265dbe698f2bc96a52aa60349cb482083eedf4b7f56f9d2cf3069d2a563</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Adverse Outcome Pathways</topic><topic>Cell Survival - drug effects</topic><topic>Cells, Cultured</topic><topic>Databases, Factual</topic><topic>Humans</topic><topic>PPAR gamma - agonists</topic><topic>PPAR gamma - antagonists &amp; inhibitors</topic><topic>PPAR gamma - metabolism</topic><topic>Pulmonary Fibrosis - chemically induced</topic><topic>Pulmonary Fibrosis - metabolism</topic><topic>Toxicogenetics</topic><topic>Troglitazone - adverse effects</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Jeong, Jaeseong</creatorcontrib><creatorcontrib>Choi, Jinhee</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Chemical research in toxicology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Jeong, Jaeseong</au><au>Choi, Jinhee</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Advancing the Adverse Outcome Pathway for PPARγ Inactivation Leading to Pulmonary Fibrosis Using Bradford-Hill Consideration and the Comparative Toxicogenomics Database</atitle><jtitle>Chemical research in toxicology</jtitle><addtitle>Chem. Res. Toxicol</addtitle><date>2022-02-21</date><risdate>2022</risdate><volume>35</volume><issue>2</issue><spage>233</spage><epage>243</epage><pages>233-243</pages><issn>0893-228X</issn><eissn>1520-5010</eissn><abstract>Pulmonary fibrosis is regulated by transforming growth factor-β (TGF-β) and peroxisome proliferator-activated receptor-gamma (PPARγ). An adverse outcome pathway (AOP) for PPARγ inactivation leading to pulmonary fibrosis has been previously developed. To advance the development of this AOP, the confidence of the overall AOP was assessed using the Bradford-Hill considerations as per the recommendations from the Organisation for Economic Co-operation and Development (OECD) Users’ Handbook. Overall, the essentiality of key events (KEs) and the biological plausibility of key event relationships (KERs) were rated high. In contrast, the empirical support of KERs was found to be moderate. To experimentally evaluate the KERs from the molecular initiating event (MIE) and KE1, PPARγ (MIE) and TGF-β (KE1) inhibitors were used to examine the effects of downstream events following inhibition of their upstream events. PPARγ inhibition (MIE) led to TGF-β activation (KE1), upregulation in vimentin expression (KE3), and an increase in the fibronectin level (KE4). Similarly, activated TGF-β (KE1) led to an increase in vimentin (KE3) and fibronectin expression (KE4). In the database analysis using the Comparative Toxicogenomics Database, 31 genes related to each KE were found to be highly correlated with pulmonary fibrosis, and the top 21 potential stressors were suggested. The AOP for pulmonary fibrosis evaluated in this study will be the basis for the screening of inhaled toxic substances in the environment.</abstract><cop>United States</cop><pub>American Chemical Society</pub><pmid>35143163</pmid><doi>10.1021/acs.chemrestox.1c00257</doi><tpages>11</tpages><orcidid>https://orcid.org/0000-0003-3393-7505</orcidid></addata></record>
fulltext fulltext
identifier ISSN: 0893-228X
ispartof Chemical research in toxicology, 2022-02, Vol.35 (2), p.233-243
issn 0893-228X
1520-5010
language eng
recordid cdi_proquest_miscellaneous_2628299370
source MEDLINE; American Chemical Society Journals
subjects Adverse Outcome Pathways
Cell Survival - drug effects
Cells, Cultured
Databases, Factual
Humans
PPAR gamma - agonists
PPAR gamma - antagonists & inhibitors
PPAR gamma - metabolism
Pulmonary Fibrosis - chemically induced
Pulmonary Fibrosis - metabolism
Toxicogenetics
Troglitazone - adverse effects
title Advancing the Adverse Outcome Pathway for PPARγ Inactivation Leading to Pulmonary Fibrosis Using Bradford-Hill Consideration and the Comparative Toxicogenomics Database
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-19T10%3A01%3A42IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Advancing%20the%20Adverse%20Outcome%20Pathway%20for%20PPAR%CE%B3%20Inactivation%20Leading%20to%20Pulmonary%20Fibrosis%20Using%20Bradford-Hill%20Consideration%20and%20the%20Comparative%20Toxicogenomics%20Database&rft.jtitle=Chemical%20research%20in%20toxicology&rft.au=Jeong,%20Jaeseong&rft.date=2022-02-21&rft.volume=35&rft.issue=2&rft.spage=233&rft.epage=243&rft.pages=233-243&rft.issn=0893-228X&rft.eissn=1520-5010&rft_id=info:doi/10.1021/acs.chemrestox.1c00257&rft_dat=%3Cproquest_cross%3E2628299370%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2628299370&rft_id=info:pmid/35143163&rfr_iscdi=true