A chromosome scale tomato genome built from complementary PacBio and Nanopore sequences alone reveals extensive linkage drag during breeding

SUMMARY The assembly and scaffolding of plant crop genomes facilitate the characterization of genetically diverse cultivated and wild germplasm. The cultivated tomato (Solanum lycopersicum) has been improved through the introgression of genetic material from related wild species, including resistanc...

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Veröffentlicht in:	The Plant journal : for cell and molecular biology 2022-04, Vol.110 (2), p.572-588
Hauptverfasser:	Rengs, Willem M. J., Schmidt, Maximilian H.‐W., Effgen, Sieglinde, Le, Duyen Bao, Wang, Yazhong, Zaidan, Mohd Waznul Adly Mohd, Huettel, Bruno, Schouten, Henk J., Usadel, Björn, Underwood, Charles J.
Format:	Artikel
Sprache:	eng
Schlagworte:	Assemblies Assembly Chromosomes Conformation Cultivation Disease resistance Drag Fruit cultivation Gene mapping Gene sequencing genome assembly Genome, Plant - genetics Genomes Germplasm Inbreeding linkage drag Lycopersicon esculentum - genetics Nanopore sequencing Nanopores Oxford Nanopore Technologies PacBio Pandemics Plant Breeding Scaffolding Sequence Analysis, DNA SMRT sequencing Solanum lycopersicum Solanum peruvianum Tobacco tobacco mosaic virus Tomatoes
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