A time series representation of protein sequences for similarity comparison

•We have mapped each amino acid into a vector based on their physicochemical indexes and the Hungarian algorithm.•We have proposed the 11-D time series representation of protein sequences and compare their similarities by DTW algorithm.•The comparison results show the effectiveness of our approach....

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Veröffentlicht in:	Journal of theoretical biology 2022-04, Vol.538, p.111039-111039, Article 111039
Hauptverfasser:	Li, Cancan, Dai, Qi, He, Ping-an
Format:	Artikel
Sprache:	eng
Schlagworte:	Amino Acid Sequence Animals Chiroptera Coronaviruses COVID-19 DTW algorithm Humans Hungarian algorithm Phylogeny SARS-CoV-2 - genetics Substitution matrix Time Factors Time series
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