In vitro and computational insights revealing the potential inhibitory effect of Tanshinone IIA against influenza A virus

Seasonal human influenza is a serious respiratory infection caused by influenza viruses that can be found all over the world. Type A influenza is a contagious viral infection that, if left untreated, can lead to life-threatening consequences. Fortunately, the plant kingdom has many potent medicines...

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Veröffentlicht in:Computers in biology and medicine 2022-02, Vol.141, p.105149-105149, Article 105149
Hauptverfasser: Elebeedy, Dalia, Badawy, Ingy, Elmaaty, Ayman Abo, Saleh, Moustafa M., Kandeil, Ahmed, Ghanem, Aml, Kutkat, Omnia, Alnajjar, Radwan, Abd El Maksoud, Ahmed I., Al-karmalawy, Ahmed A.
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container_title Computers in biology and medicine
container_volume 141
creator Elebeedy, Dalia
Badawy, Ingy
Elmaaty, Ayman Abo
Saleh, Moustafa M.
Kandeil, Ahmed
Ghanem, Aml
Kutkat, Omnia
Alnajjar, Radwan
Abd El Maksoud, Ahmed I.
Al-karmalawy, Ahmed A.
description Seasonal human influenza is a serious respiratory infection caused by influenza viruses that can be found all over the world. Type A influenza is a contagious viral infection that, if left untreated, can lead to life-threatening consequences. Fortunately, the plant kingdom has many potent medicines with broad-spectrum antiviral activity. Herein, six plant constituents, namely Tanshinone IIA 1, Carnosic acid 2, Rosmarinic acid 3, Glycyrrhetinic acid 4, Baicalein 5, and Salvianolic acid B 6, were screened for their antiviral activities against H1N1 virus using in vitro and in silico approaches. Hence, their anti-influenza activities were tested in vitro to determine inhibitory concentration 50 (IC50) values after measuring their CC50 values using MTT assay on MDCK cells. Interestingly, Tanshinone IIA (TAN) 1 was the most promising member with CC50 = 9.678 μg/ml. Moreover, the plaque reduction assay carried on TAN 1 revealed promising viral inhibition percentages of 97.9%, 95.8%, 94.4%, and 91.7% using concentrations 0.05 μg/μl, 0.025 μg/μl, 0.0125 μg/μl, and 0.006 μg/μl, respectively. Furthermore, in silico molecular docking disclosed the superior affinities of Salvianolic acid B (SAL) 6 towards both surface glycoproteins of influenza A virus (namely, hemagglutinin (HA) and neuraminidase (NA)). The docked complexes of both SAL and TAN inside HA and NA receptor pockets were selected for 100 ns MD simulations followed by MM-GBSA binding free energy calculation to confirm the docking results and give more insights regarding the stability of both compounds inside influenza mentioned receptors, respectively. The selection criteria of the previously mentioned complexes were based on the fact that SAL showed the highest docking scores on both viral HA and NA glycoproteins whereas TAN achieved the best inhibitory activity on the other hand. Finally, we urge more advanced preclinical and clinical research, particularly for TAN, which could be used to treat the human influenza A virus effectively. [Display omitted] •Tanshinone IIA, Carnosic acid, Rosmarinic acid, Glycyrrhetinic acid, Baicalein, and Salvianolic acid B were screened for their antiviral activities against H1N1 virus using in vitro and in silico approaches.•Tanshinone IIA revealed promising viral inhibitions of 97.9, 95.8, 94.4, and 91.7% at concentrations 0.05, 0.025, 0.0125, and 0.006 μg/μl, respectively.•In silico molecular docking and dynamics disclosed the superior affinities of Salvianolic acid B to
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Type A influenza is a contagious viral infection that, if left untreated, can lead to life-threatening consequences. Fortunately, the plant kingdom has many potent medicines with broad-spectrum antiviral activity. Herein, six plant constituents, namely Tanshinone IIA 1, Carnosic acid 2, Rosmarinic acid 3, Glycyrrhetinic acid 4, Baicalein 5, and Salvianolic acid B 6, were screened for their antiviral activities against H1N1 virus using in vitro and in silico approaches. Hence, their anti-influenza activities were tested in vitro to determine inhibitory concentration 50 (IC50) values after measuring their CC50 values using MTT assay on MDCK cells. Interestingly, Tanshinone IIA (TAN) 1 was the most promising member with CC50 = 9.678 μg/ml. Moreover, the plaque reduction assay carried on TAN 1 revealed promising viral inhibition percentages of 97.9%, 95.8%, 94.4%, and 91.7% using concentrations 0.05 μg/μl, 0.025 μg/μl, 0.0125 μg/μl, and 0.006 μg/μl, respectively. Furthermore, in silico molecular docking disclosed the superior affinities of Salvianolic acid B (SAL) 6 towards both surface glycoproteins of influenza A virus (namely, hemagglutinin (HA) and neuraminidase (NA)). The docked complexes of both SAL and TAN inside HA and NA receptor pockets were selected for 100 ns MD simulations followed by MM-GBSA binding free energy calculation to confirm the docking results and give more insights regarding the stability of both compounds inside influenza mentioned receptors, respectively. The selection criteria of the previously mentioned complexes were based on the fact that SAL showed the highest docking scores on both viral HA and NA glycoproteins whereas TAN achieved the best inhibitory activity on the other hand. Finally, we urge more advanced preclinical and clinical research, particularly for TAN, which could be used to treat the human influenza A virus effectively. [Display omitted] •Tanshinone IIA, Carnosic acid, Rosmarinic acid, Glycyrrhetinic acid, Baicalein, and Salvianolic acid B were screened for their antiviral activities against H1N1 virus using in vitro and in silico approaches.•Tanshinone IIA revealed promising viral inhibitions of 97.9, 95.8, 94.4, and 91.7% at concentrations 0.05, 0.025, 0.0125, and 0.006 μg/μl, respectively.•In silico molecular docking and dynamics disclosed the superior affinities of Salvianolic acid B towards both surface glycoproteins of influenza A virus (namely, hemagglutinin (HA) and neuraminidase (NA)).</description><identifier>ISSN: 0010-4825</identifier><identifier>EISSN: 1879-0534</identifier><identifier>DOI: 10.1016/j.compbiomed.2021.105149</identifier><identifier>PMID: 34953359</identifier><language>eng</language><publisher>United States: Elsevier Ltd</publisher><subject>Abietanes ; Acids ; Antiviral ; Antiviral activity ; Antiviral drugs ; Chronic obstructive pulmonary disease ; Computational studies ; Computer applications ; Cytokines ; Cytotoxicity ; Drug resistance ; Exo-a-sialidase ; Free energy ; Glycoproteins ; H1N1 ; Hemagglutinins ; Humans ; Infections ; Influenza ; Influenza A ; Influenza A virus - metabolism ; Influenza A Virus, H1N1 Subtype - metabolism ; Medicinal plants ; Molecular docking ; Molecular Docking Simulation ; Neuraminidase - metabolism ; Neuraminidase - pharmacology ; Pandemics ; Receptors ; Respiratory syncytial virus ; Rosmarinic acid ; Swine flu ; Tanshinone IIA ; Tanshinones ; Viruses</subject><ispartof>Computers in biology and medicine, 2022-02, Vol.141, p.105149-105149, Article 105149</ispartof><rights>2021 Elsevier Ltd</rights><rights>Copyright © 2021 Elsevier Ltd. 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Elsevier Ltd</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c402t-2c17e45cf0e310c3f9b0d52cd2cc64c0c4a6878c9d2ee65d9835fde94d7a8053</citedby><cites>FETCH-LOGICAL-c402t-2c17e45cf0e310c3f9b0d52cd2cc64c0c4a6878c9d2ee65d9835fde94d7a8053</cites><orcidid>0000-0002-4634-3039 ; 0000-0003-3253-6961</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.proquest.com/docview/2623599132?pq-origsite=primo$$EHTML$$P50$$Gproquest$$H</linktohtml><link.rule.ids>314,780,784,3549,27923,27924,45994,64384,64386,64388,72340</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/34953359$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Elebeedy, Dalia</creatorcontrib><creatorcontrib>Badawy, Ingy</creatorcontrib><creatorcontrib>Elmaaty, Ayman Abo</creatorcontrib><creatorcontrib>Saleh, Moustafa M.</creatorcontrib><creatorcontrib>Kandeil, Ahmed</creatorcontrib><creatorcontrib>Ghanem, Aml</creatorcontrib><creatorcontrib>Kutkat, Omnia</creatorcontrib><creatorcontrib>Alnajjar, Radwan</creatorcontrib><creatorcontrib>Abd El Maksoud, Ahmed I.</creatorcontrib><creatorcontrib>Al-karmalawy, Ahmed A.</creatorcontrib><title>In vitro and computational insights revealing the potential inhibitory effect of Tanshinone IIA against influenza A virus</title><title>Computers in biology and medicine</title><addtitle>Comput Biol Med</addtitle><description>Seasonal human influenza is a serious respiratory infection caused by influenza viruses that can be found all over the world. Type A influenza is a contagious viral infection that, if left untreated, can lead to life-threatening consequences. Fortunately, the plant kingdom has many potent medicines with broad-spectrum antiviral activity. Herein, six plant constituents, namely Tanshinone IIA 1, Carnosic acid 2, Rosmarinic acid 3, Glycyrrhetinic acid 4, Baicalein 5, and Salvianolic acid B 6, were screened for their antiviral activities against H1N1 virus using in vitro and in silico approaches. Hence, their anti-influenza activities were tested in vitro to determine inhibitory concentration 50 (IC50) values after measuring their CC50 values using MTT assay on MDCK cells. Interestingly, Tanshinone IIA (TAN) 1 was the most promising member with CC50 = 9.678 μg/ml. Moreover, the plaque reduction assay carried on TAN 1 revealed promising viral inhibition percentages of 97.9%, 95.8%, 94.4%, and 91.7% using concentrations 0.05 μg/μl, 0.025 μg/μl, 0.0125 μg/μl, and 0.006 μg/μl, respectively. Furthermore, in silico molecular docking disclosed the superior affinities of Salvianolic acid B (SAL) 6 towards both surface glycoproteins of influenza A virus (namely, hemagglutinin (HA) and neuraminidase (NA)). The docked complexes of both SAL and TAN inside HA and NA receptor pockets were selected for 100 ns MD simulations followed by MM-GBSA binding free energy calculation to confirm the docking results and give more insights regarding the stability of both compounds inside influenza mentioned receptors, respectively. The selection criteria of the previously mentioned complexes were based on the fact that SAL showed the highest docking scores on both viral HA and NA glycoproteins whereas TAN achieved the best inhibitory activity on the other hand. Finally, we urge more advanced preclinical and clinical research, particularly for TAN, which could be used to treat the human influenza A virus effectively. [Display omitted] •Tanshinone IIA, Carnosic acid, Rosmarinic acid, Glycyrrhetinic acid, Baicalein, and Salvianolic acid B were screened for their antiviral activities against H1N1 virus using in vitro and in silico approaches.•Tanshinone IIA revealed promising viral inhibitions of 97.9, 95.8, 94.4, and 91.7% at concentrations 0.05, 0.025, 0.0125, and 0.006 μg/μl, respectively.•In silico molecular docking and dynamics disclosed the superior affinities of Salvianolic acid B towards both surface glycoproteins of influenza A virus (namely, hemagglutinin (HA) and neuraminidase (NA)).</description><subject>Abietanes</subject><subject>Acids</subject><subject>Antiviral</subject><subject>Antiviral activity</subject><subject>Antiviral drugs</subject><subject>Chronic obstructive pulmonary disease</subject><subject>Computational studies</subject><subject>Computer applications</subject><subject>Cytokines</subject><subject>Cytotoxicity</subject><subject>Drug resistance</subject><subject>Exo-a-sialidase</subject><subject>Free energy</subject><subject>Glycoproteins</subject><subject>H1N1</subject><subject>Hemagglutinins</subject><subject>Humans</subject><subject>Infections</subject><subject>Influenza</subject><subject>Influenza A</subject><subject>Influenza A virus - metabolism</subject><subject>Influenza A Virus, H1N1 Subtype - metabolism</subject><subject>Medicinal plants</subject><subject>Molecular docking</subject><subject>Molecular Docking Simulation</subject><subject>Neuraminidase - metabolism</subject><subject>Neuraminidase - pharmacology</subject><subject>Pandemics</subject><subject>Receptors</subject><subject>Respiratory syncytial virus</subject><subject>Rosmarinic acid</subject><subject>Swine flu</subject><subject>Tanshinone IIA</subject><subject>Tanshinones</subject><subject>Viruses</subject><issn>0010-4825</issn><issn>1879-0534</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNqFkc2LUzEUxYMoTh39FyTgxs2r-Xx9WdbBj8KAm-5Dmty0Ka9JTfIK9a83z84guHF14d7fPQfOQQhTsqSE9p-OS5tO511IJ3BLRhhta0mFeoEWdFipjkguXqIFIZR0YmDyDr0p5UgIEYST1-iOCyU5l2qBrpuIL6HmhE10eFadqqkhRTPiEEvYH2rBGS5gxhD3uB4An1OFWMMf4BB2oaZ8xeA92IqTx1sTyyHEFAFvNmts9qbp1Mb6cYL4y-B1M8xTeYteeTMWePc079H265ftw_fu8ce3zcP6sbOCsNoxS1cgpPUEOCWWe7UjTjLrmLW9sMQK0w-rwSrHAHrp1MCld6CEW5mh5XCPPt5kzzn9nKBUfQrFwjiaCGkqmvVUMD4oKhr64R_0mKbckpgp1uJSlLNGDTfK5lRKBq_POZxMvmpK9NyOPuq_7ei5HX1rp72-fzKYdvPt-fG5jgZ8vgHQArkEyLrYANGCC7nFq10K_3f5DQNvp0k</recordid><startdate>202202</startdate><enddate>202202</enddate><creator>Elebeedy, Dalia</creator><creator>Badawy, Ingy</creator><creator>Elmaaty, Ayman Abo</creator><creator>Saleh, Moustafa M.</creator><creator>Kandeil, Ahmed</creator><creator>Ghanem, Aml</creator><creator>Kutkat, Omnia</creator><creator>Alnajjar, Radwan</creator><creator>Abd El Maksoud, Ahmed I.</creator><creator>Al-karmalawy, Ahmed A.</creator><general>Elsevier Ltd</general><general>Elsevier Limited</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7RV</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AL</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>HCIFZ</scope><scope>JQ2</scope><scope>K7-</scope><scope>K9.</scope><scope>KB0</scope><scope>LK8</scope><scope>M0N</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M7P</scope><scope>M7Z</scope><scope>MBDVC</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-4634-3039</orcidid><orcidid>https://orcid.org/0000-0003-3253-6961</orcidid></search><sort><creationdate>202202</creationdate><title>In vitro and computational insights revealing the potential inhibitory effect of Tanshinone IIA against influenza A virus</title><author>Elebeedy, Dalia ; Badawy, Ingy ; Elmaaty, Ayman Abo ; Saleh, Moustafa M. ; Kandeil, Ahmed ; Ghanem, Aml ; Kutkat, Omnia ; Alnajjar, Radwan ; Abd El Maksoud, Ahmed I. ; Al-karmalawy, Ahmed A.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c402t-2c17e45cf0e310c3f9b0d52cd2cc64c0c4a6878c9d2ee65d9835fde94d7a8053</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Abietanes</topic><topic>Acids</topic><topic>Antiviral</topic><topic>Antiviral activity</topic><topic>Antiviral drugs</topic><topic>Chronic obstructive pulmonary disease</topic><topic>Computational studies</topic><topic>Computer applications</topic><topic>Cytokines</topic><topic>Cytotoxicity</topic><topic>Drug resistance</topic><topic>Exo-a-sialidase</topic><topic>Free energy</topic><topic>Glycoproteins</topic><topic>H1N1</topic><topic>Hemagglutinins</topic><topic>Humans</topic><topic>Infections</topic><topic>Influenza</topic><topic>Influenza A</topic><topic>Influenza A virus - metabolism</topic><topic>Influenza A Virus, H1N1 Subtype - metabolism</topic><topic>Medicinal plants</topic><topic>Molecular docking</topic><topic>Molecular Docking Simulation</topic><topic>Neuraminidase - metabolism</topic><topic>Neuraminidase - pharmacology</topic><topic>Pandemics</topic><topic>Receptors</topic><topic>Respiratory syncytial virus</topic><topic>Rosmarinic acid</topic><topic>Swine flu</topic><topic>Tanshinone IIA</topic><topic>Tanshinones</topic><topic>Viruses</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Elebeedy, Dalia</creatorcontrib><creatorcontrib>Badawy, Ingy</creatorcontrib><creatorcontrib>Elmaaty, Ayman Abo</creatorcontrib><creatorcontrib>Saleh, Moustafa M.</creatorcontrib><creatorcontrib>Kandeil, Ahmed</creatorcontrib><creatorcontrib>Ghanem, Aml</creatorcontrib><creatorcontrib>Kutkat, Omnia</creatorcontrib><creatorcontrib>Alnajjar, Radwan</creatorcontrib><creatorcontrib>Abd El Maksoud, Ahmed I.</creatorcontrib><creatorcontrib>Al-karmalawy, Ahmed A.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Nursing &amp; 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Type A influenza is a contagious viral infection that, if left untreated, can lead to life-threatening consequences. Fortunately, the plant kingdom has many potent medicines with broad-spectrum antiviral activity. Herein, six plant constituents, namely Tanshinone IIA 1, Carnosic acid 2, Rosmarinic acid 3, Glycyrrhetinic acid 4, Baicalein 5, and Salvianolic acid B 6, were screened for their antiviral activities against H1N1 virus using in vitro and in silico approaches. Hence, their anti-influenza activities were tested in vitro to determine inhibitory concentration 50 (IC50) values after measuring their CC50 values using MTT assay on MDCK cells. Interestingly, Tanshinone IIA (TAN) 1 was the most promising member with CC50 = 9.678 μg/ml. Moreover, the plaque reduction assay carried on TAN 1 revealed promising viral inhibition percentages of 97.9%, 95.8%, 94.4%, and 91.7% using concentrations 0.05 μg/μl, 0.025 μg/μl, 0.0125 μg/μl, and 0.006 μg/μl, respectively. Furthermore, in silico molecular docking disclosed the superior affinities of Salvianolic acid B (SAL) 6 towards both surface glycoproteins of influenza A virus (namely, hemagglutinin (HA) and neuraminidase (NA)). The docked complexes of both SAL and TAN inside HA and NA receptor pockets were selected for 100 ns MD simulations followed by MM-GBSA binding free energy calculation to confirm the docking results and give more insights regarding the stability of both compounds inside influenza mentioned receptors, respectively. The selection criteria of the previously mentioned complexes were based on the fact that SAL showed the highest docking scores on both viral HA and NA glycoproteins whereas TAN achieved the best inhibitory activity on the other hand. Finally, we urge more advanced preclinical and clinical research, particularly for TAN, which could be used to treat the human influenza A virus effectively. [Display omitted] •Tanshinone IIA, Carnosic acid, Rosmarinic acid, Glycyrrhetinic acid, Baicalein, and Salvianolic acid B were screened for their antiviral activities against H1N1 virus using in vitro and in silico approaches.•Tanshinone IIA revealed promising viral inhibitions of 97.9, 95.8, 94.4, and 91.7% at concentrations 0.05, 0.025, 0.0125, and 0.006 μg/μl, respectively.•In silico molecular docking and dynamics disclosed the superior affinities of Salvianolic acid B towards both surface glycoproteins of influenza A virus (namely, hemagglutinin (HA) and neuraminidase (NA)).</abstract><cop>United States</cop><pub>Elsevier Ltd</pub><pmid>34953359</pmid><doi>10.1016/j.compbiomed.2021.105149</doi><tpages>1</tpages><orcidid>https://orcid.org/0000-0002-4634-3039</orcidid><orcidid>https://orcid.org/0000-0003-3253-6961</orcidid></addata></record>
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source MEDLINE; ScienceDirect Journals (5 years ago - present); ProQuest Central UK/Ireland
subjects Abietanes
Acids
Antiviral
Antiviral activity
Antiviral drugs
Chronic obstructive pulmonary disease
Computational studies
Computer applications
Cytokines
Cytotoxicity
Drug resistance
Exo-a-sialidase
Free energy
Glycoproteins
H1N1
Hemagglutinins
Humans
Infections
Influenza
Influenza A
Influenza A virus - metabolism
Influenza A Virus, H1N1 Subtype - metabolism
Medicinal plants
Molecular docking
Molecular Docking Simulation
Neuraminidase - metabolism
Neuraminidase - pharmacology
Pandemics
Receptors
Respiratory syncytial virus
Rosmarinic acid
Swine flu
Tanshinone IIA
Tanshinones
Viruses
title In vitro and computational insights revealing the potential inhibitory effect of Tanshinone IIA against influenza A virus
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