Fusibacter ferrireducens sp. nov., an anaerobic, Fe(Ⅲ)- and sulphur-reducing bacterium isolated from mangrove sediment
An anaerobic, alkaliphilic, halotolerant, Gram-stain-positive and rod-shaped bacterium, designated Q10-2 , was isolated from mangrove sediment sampled at the Jiulong river estuary, PR China. The cells of strain Q10-2 were motile and 0.5×2-4 µm in size. Strain Q10-2 grew at 8-45 °C (optimum, 32 °C),...
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| creator | Qiu, Donghua Zeng, Xiang Zeng, Lingyu Li, Guangyu Shao, Zongze |
| description | An anaerobic, alkaliphilic, halotolerant, Gram-stain-positive and rod-shaped bacterium, designated Q10-2
, was isolated from mangrove sediment sampled at the Jiulong river estuary, PR China. The cells of strain Q10-2
were motile and 0.5×2-4 µm in size. Strain Q10-2
grew at 8-45 °C (optimum, 32 °C), at pH 7.0-10.5 (optimum, pH 8.5) and in the presence of 0-6 % (w/v) NaCl (optimum, 3 %). It could use complex organic compounds and carbohydrates including d-fructose, d-galactose, d-glucose, d-mannitol, d-xylose, trehalose, lactose, maltose, sucrose and starch as carbon sources and electron donors. It could reduce sulphate, thiosulphate and elemental sulphur to sulphide, but not sulphite. Fe (Ⅲ) citrate, ferrihydrite, haematite and goethite in the presence of glucose as the electron donor were also reduced. Acetate, butyrate, ethanol, CO
and H
were end products of glucose fermentation. The predominant cellular fatty acids were composed of C
, C
and summed features containing C
ω7
and/or iso-C
2-OH and iso-C
and/or anteiso-C
B. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the novel strain was most closely related to
DSM 12116
(95.5 % sequence similarity). The genome size of strain Q10-2
was 5.0 Mb, with a G+C content of 37.4 mol%. The average nucleotide identity and digital DNA-DNA hybridization values between strain Q10-2
and
DSM 12116
were 69.1 and 21.8 %, respectively. The combined genotypic and phenotypic data showed that strain Q10-2
represents a novel species of the genus
, for which the name
sp. nov. is proposed. The type strain is Q10-2
(=MCCC 1A16257
=KCTC 15906
). |
| doi_str_mv | 10.1099/ijsem.0.004952 |
| format | Article |
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, was isolated from mangrove sediment sampled at the Jiulong river estuary, PR China. The cells of strain Q10-2
were motile and 0.5×2-4 µm in size. Strain Q10-2
grew at 8-45 °C (optimum, 32 °C), at pH 7.0-10.5 (optimum, pH 8.5) and in the presence of 0-6 % (w/v) NaCl (optimum, 3 %). It could use complex organic compounds and carbohydrates including d-fructose, d-galactose, d-glucose, d-mannitol, d-xylose, trehalose, lactose, maltose, sucrose and starch as carbon sources and electron donors. It could reduce sulphate, thiosulphate and elemental sulphur to sulphide, but not sulphite. Fe (Ⅲ) citrate, ferrihydrite, haematite and goethite in the presence of glucose as the electron donor were also reduced. Acetate, butyrate, ethanol, CO
and H
were end products of glucose fermentation. The predominant cellular fatty acids were composed of C
, C
and summed features containing C
ω7
and/or iso-C
2-OH and iso-C
and/or anteiso-C
B. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the novel strain was most closely related to
DSM 12116
(95.5 % sequence similarity). The genome size of strain Q10-2
was 5.0 Mb, with a G+C content of 37.4 mol%. The average nucleotide identity and digital DNA-DNA hybridization values between strain Q10-2
and
DSM 12116
were 69.1 and 21.8 %, respectively. The combined genotypic and phenotypic data showed that strain Q10-2
represents a novel species of the genus
, for which the name
sp. nov. is proposed. The type strain is Q10-2
(=MCCC 1A16257
=KCTC 15906
).</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijsem.0.004952</identifier><identifier>PMID: 34739363</identifier><language>eng</language><publisher>England</publisher><subject>Anaerobiosis ; Bacterial Typing Techniques ; Base Composition ; China ; Clostridiales - classification ; Clostridiales - isolation & purification ; DNA, Bacterial - genetics ; Fatty Acids - chemistry ; Ferric Compounds ; Geologic Sediments - microbiology ; Nucleic Acid Hybridization ; Phospholipids - chemistry ; Phylogeny ; RNA, Ribosomal, 16S - genetics ; Sequence Analysis, DNA ; Sulfur ; Sulfur-Reducing Bacteria - classification ; Sulfur-Reducing Bacteria - isolation & purification ; Wetlands</subject><ispartof>International journal of systematic and evolutionary microbiology, 2021-11, Vol.71 (11)</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c295t-ab7f7d7d145f9487e5eb0fc7c302b4ef97978cc3e1ac79162b9f9e82687f0b293</citedby><cites>FETCH-LOGICAL-c295t-ab7f7d7d145f9487e5eb0fc7c302b4ef97978cc3e1ac79162b9f9e82687f0b293</cites><orcidid>0000-0002-6066-7013</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,3746,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/34739363$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Qiu, Donghua</creatorcontrib><creatorcontrib>Zeng, Xiang</creatorcontrib><creatorcontrib>Zeng, Lingyu</creatorcontrib><creatorcontrib>Li, Guangyu</creatorcontrib><creatorcontrib>Shao, Zongze</creatorcontrib><title>Fusibacter ferrireducens sp. nov., an anaerobic, Fe(Ⅲ)- and sulphur-reducing bacterium isolated from mangrove sediment</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>An anaerobic, alkaliphilic, halotolerant, Gram-stain-positive and rod-shaped bacterium, designated Q10-2
, was isolated from mangrove sediment sampled at the Jiulong river estuary, PR China. The cells of strain Q10-2
were motile and 0.5×2-4 µm in size. Strain Q10-2
grew at 8-45 °C (optimum, 32 °C), at pH 7.0-10.5 (optimum, pH 8.5) and in the presence of 0-6 % (w/v) NaCl (optimum, 3 %). It could use complex organic compounds and carbohydrates including d-fructose, d-galactose, d-glucose, d-mannitol, d-xylose, trehalose, lactose, maltose, sucrose and starch as carbon sources and electron donors. It could reduce sulphate, thiosulphate and elemental sulphur to sulphide, but not sulphite. Fe (Ⅲ) citrate, ferrihydrite, haematite and goethite in the presence of glucose as the electron donor were also reduced. Acetate, butyrate, ethanol, CO
and H
were end products of glucose fermentation. The predominant cellular fatty acids were composed of C
, C
and summed features containing C
ω7
and/or iso-C
2-OH and iso-C
and/or anteiso-C
B. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the novel strain was most closely related to
DSM 12116
(95.5 % sequence similarity). The genome size of strain Q10-2
was 5.0 Mb, with a G+C content of 37.4 mol%. The average nucleotide identity and digital DNA-DNA hybridization values between strain Q10-2
and
DSM 12116
were 69.1 and 21.8 %, respectively. The combined genotypic and phenotypic data showed that strain Q10-2
represents a novel species of the genus
, for which the name
sp. nov. is proposed. The type strain is Q10-2
(=MCCC 1A16257
=KCTC 15906
).</description><subject>Anaerobiosis</subject><subject>Bacterial Typing Techniques</subject><subject>Base Composition</subject><subject>China</subject><subject>Clostridiales - classification</subject><subject>Clostridiales - isolation & purification</subject><subject>DNA, Bacterial - genetics</subject><subject>Fatty Acids - chemistry</subject><subject>Ferric Compounds</subject><subject>Geologic Sediments - microbiology</subject><subject>Nucleic Acid Hybridization</subject><subject>Phospholipids - chemistry</subject><subject>Phylogeny</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Sequence Analysis, DNA</subject><subject>Sulfur</subject><subject>Sulfur-Reducing Bacteria - classification</subject><subject>Sulfur-Reducing Bacteria - isolation & purification</subject><subject>Wetlands</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNo9kE1OwzAUhC0EoqWwZYm8LFITHNuJ4yWqKCBVYgPryHGei6v8YScVHICLcDROQmig0pPmaTQziw-hy4iEEZHyxm49VCEJCeEypkdoGvEkCWLC-PHhp8kEnXm_JWQwCDlFE8YFkyxhU_S-6r3Nle7AYQPOWQdFr6H22LchrptduMCqHk6Ba3KrF3gF8-_Pr-tg8Ars-7J97V2wb9l6g8cp21fY-qZUHRTYuKbClao3rtkB9lDYCuruHJ0YVXq4-NMZelndPS8fgvXT_ePydh1oKuMuULkwohBFxGMjeSoghpwYLTQjNOdgpJAi1ZpBpLSQUUJzaSSkNEmFITmVbIbm427rmrcefJdV1msoS1VD0_uMxpJTSXnKh2g4RrVrvHdgstbZSrmPLCLZL-1sTzsj2Uh7KFz9bfd5BcUh_o-X_QA7_X4M</recordid><startdate>202111</startdate><enddate>202111</enddate><creator>Qiu, Donghua</creator><creator>Zeng, Xiang</creator><creator>Zeng, Lingyu</creator><creator>Li, Guangyu</creator><creator>Shao, Zongze</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-6066-7013</orcidid></search><sort><creationdate>202111</creationdate><title>Fusibacter ferrireducens sp. nov., an anaerobic, Fe(Ⅲ)- and sulphur-reducing bacterium isolated from mangrove sediment</title><author>Qiu, Donghua ; Zeng, Xiang ; Zeng, Lingyu ; Li, Guangyu ; Shao, Zongze</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c295t-ab7f7d7d145f9487e5eb0fc7c302b4ef97978cc3e1ac79162b9f9e82687f0b293</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Anaerobiosis</topic><topic>Bacterial Typing Techniques</topic><topic>Base Composition</topic><topic>China</topic><topic>Clostridiales - classification</topic><topic>Clostridiales - isolation & purification</topic><topic>DNA, Bacterial - genetics</topic><topic>Fatty Acids - chemistry</topic><topic>Ferric Compounds</topic><topic>Geologic Sediments - microbiology</topic><topic>Nucleic Acid Hybridization</topic><topic>Phospholipids - chemistry</topic><topic>Phylogeny</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Sequence Analysis, DNA</topic><topic>Sulfur</topic><topic>Sulfur-Reducing Bacteria - classification</topic><topic>Sulfur-Reducing Bacteria - isolation & purification</topic><topic>Wetlands</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Qiu, Donghua</creatorcontrib><creatorcontrib>Zeng, Xiang</creatorcontrib><creatorcontrib>Zeng, Lingyu</creatorcontrib><creatorcontrib>Li, Guangyu</creatorcontrib><creatorcontrib>Shao, Zongze</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Qiu, Donghua</au><au>Zeng, Xiang</au><au>Zeng, Lingyu</au><au>Li, Guangyu</au><au>Shao, Zongze</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Fusibacter ferrireducens sp. nov., an anaerobic, Fe(Ⅲ)- and sulphur-reducing bacterium isolated from mangrove sediment</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2021-11</date><risdate>2021</risdate><volume>71</volume><issue>11</issue><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>An anaerobic, alkaliphilic, halotolerant, Gram-stain-positive and rod-shaped bacterium, designated Q10-2
, was isolated from mangrove sediment sampled at the Jiulong river estuary, PR China. The cells of strain Q10-2
were motile and 0.5×2-4 µm in size. Strain Q10-2
grew at 8-45 °C (optimum, 32 °C), at pH 7.0-10.5 (optimum, pH 8.5) and in the presence of 0-6 % (w/v) NaCl (optimum, 3 %). It could use complex organic compounds and carbohydrates including d-fructose, d-galactose, d-glucose, d-mannitol, d-xylose, trehalose, lactose, maltose, sucrose and starch as carbon sources and electron donors. It could reduce sulphate, thiosulphate and elemental sulphur to sulphide, but not sulphite. Fe (Ⅲ) citrate, ferrihydrite, haematite and goethite in the presence of glucose as the electron donor were also reduced. Acetate, butyrate, ethanol, CO
and H
were end products of glucose fermentation. The predominant cellular fatty acids were composed of C
, C
and summed features containing C
ω7
and/or iso-C
2-OH and iso-C
and/or anteiso-C
B. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the novel strain was most closely related to
DSM 12116
(95.5 % sequence similarity). The genome size of strain Q10-2
was 5.0 Mb, with a G+C content of 37.4 mol%. The average nucleotide identity and digital DNA-DNA hybridization values between strain Q10-2
and
DSM 12116
were 69.1 and 21.8 %, respectively. The combined genotypic and phenotypic data showed that strain Q10-2
represents a novel species of the genus
, for which the name
sp. nov. is proposed. The type strain is Q10-2
(=MCCC 1A16257
=KCTC 15906
).</abstract><cop>England</cop><pmid>34739363</pmid><doi>10.1099/ijsem.0.004952</doi><orcidid>https://orcid.org/0000-0002-6066-7013</orcidid></addata></record> |
| fulltext | fulltext |
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| ispartof | International journal of systematic and evolutionary microbiology, 2021-11, Vol.71 (11) |
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| language | eng |
| recordid | cdi_proquest_miscellaneous_2594292484 |
| source | MEDLINE; Microbiology Society; EZB-FREE-00999 freely available EZB journals; Alma/SFX Local Collection |
| subjects | Anaerobiosis Bacterial Typing Techniques Base Composition China Clostridiales - classification Clostridiales - isolation & purification DNA, Bacterial - genetics Fatty Acids - chemistry Ferric Compounds Geologic Sediments - microbiology Nucleic Acid Hybridization Phospholipids - chemistry Phylogeny RNA, Ribosomal, 16S - genetics Sequence Analysis, DNA Sulfur Sulfur-Reducing Bacteria - classification Sulfur-Reducing Bacteria - isolation & purification Wetlands |
| title | Fusibacter ferrireducens sp. nov., an anaerobic, Fe(Ⅲ)- and sulphur-reducing bacterium isolated from mangrove sediment |
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