Development of ultrafast PCR assays for the event-specific detection of eleven approved genetically modified canola events in South Korea
•Ultrafast PCR assays for eleven GM canola events were developed.•The specificities and the detectability of the developed assays were validated.•The developed assays provide rapid and event-specific detection of GM canola events.•The potential quantitative analyses for GM canola events were evaluat...
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Veröffentlicht in: | Food chemistry 2022-03, Vol.373 (Pt A), p.131419-131419, Article 131419 |
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creator | Park, Ji-Eun Lee, Do-Geun Kim, Hong-Rae Kim, Mi-Ju Kim, Hae-Yeong Kim, Hyun-Joong |
description | •Ultrafast PCR assays for eleven GM canola events were developed.•The specificities and the detectability of the developed assays were validated.•The developed assays provide rapid and event-specific detection of GM canola events.•The potential quantitative analyses for GM canola events were evaluated.
In Korea, genetically modified (GM) canola events derived from eleven single events have been authorized for food and feed, but not for cultivation. Therefore, the development of a rapid and accurate on-site detection method is crucial for the management of these approved GM canola events. In this study, ultrafast polymerase chain reaction (PCR) assays for the event-specific detection of eleven GM canola events were developed. The limit of detection (LOD) on DNA-based and powder-based GM canola samples of each primer set using the ultrafast PCR ranged from 0.1% to 0.01%, while the quantitative analysis of these ultrafast PCR assays, indicated that the correlation coefficient (R2) ranged from 0.98 to 0.9903. These results indicate that the developed assays may have sufficient specificity and LOD capacity to detect the eleven specific GM canola events for the attendant management and monitoring, thus preventing GM canola from contaminating the natural environment. |
doi_str_mv | 10.1016/j.foodchem.2021.131419 |
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In Korea, genetically modified (GM) canola events derived from eleven single events have been authorized for food and feed, but not for cultivation. Therefore, the development of a rapid and accurate on-site detection method is crucial for the management of these approved GM canola events. In this study, ultrafast polymerase chain reaction (PCR) assays for the event-specific detection of eleven GM canola events were developed. The limit of detection (LOD) on DNA-based and powder-based GM canola samples of each primer set using the ultrafast PCR ranged from 0.1% to 0.01%, while the quantitative analysis of these ultrafast PCR assays, indicated that the correlation coefficient (R2) ranged from 0.98 to 0.9903. These results indicate that the developed assays may have sufficient specificity and LOD capacity to detect the eleven specific GM canola events for the attendant management and monitoring, thus preventing GM canola from contaminating the natural environment.</description><identifier>ISSN: 0308-8146</identifier><identifier>EISSN: 1873-7072</identifier><identifier>DOI: 10.1016/j.foodchem.2021.131419</identifier><identifier>PMID: 34717087</identifier><language>eng</language><publisher>England: Elsevier Ltd</publisher><subject>Biological Assay ; Brassica napus - genetics ; DNA, Plant - genetics ; Event-specific detection ; Genetically modified canola ; Limit of Detection ; Oilseed rape ; Plants, Genetically Modified - genetics ; Polymerase Chain Reaction ; Ultrafast polymerase chain reaction (PCR)</subject><ispartof>Food chemistry, 2022-03, Vol.373 (Pt A), p.131419-131419, Article 131419</ispartof><rights>2021 Elsevier Ltd</rights><rights>Copyright © 2021 Elsevier Ltd. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c434t-f15ea7b23f4a0c655de547e208cca4bb0e3578c413295960888211a948fc39583</citedby><cites>FETCH-LOGICAL-c434t-f15ea7b23f4a0c655de547e208cca4bb0e3578c413295960888211a948fc39583</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0308814621024250$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65534</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/34717087$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Park, Ji-Eun</creatorcontrib><creatorcontrib>Lee, Do-Geun</creatorcontrib><creatorcontrib>Kim, Hong-Rae</creatorcontrib><creatorcontrib>Kim, Mi-Ju</creatorcontrib><creatorcontrib>Kim, Hae-Yeong</creatorcontrib><creatorcontrib>Kim, Hyun-Joong</creatorcontrib><title>Development of ultrafast PCR assays for the event-specific detection of eleven approved genetically modified canola events in South Korea</title><title>Food chemistry</title><addtitle>Food Chem</addtitle><description>•Ultrafast PCR assays for eleven GM canola events were developed.•The specificities and the detectability of the developed assays were validated.•The developed assays provide rapid and event-specific detection of GM canola events.•The potential quantitative analyses for GM canola events were evaluated.
In Korea, genetically modified (GM) canola events derived from eleven single events have been authorized for food and feed, but not for cultivation. Therefore, the development of a rapid and accurate on-site detection method is crucial for the management of these approved GM canola events. In this study, ultrafast polymerase chain reaction (PCR) assays for the event-specific detection of eleven GM canola events were developed. The limit of detection (LOD) on DNA-based and powder-based GM canola samples of each primer set using the ultrafast PCR ranged from 0.1% to 0.01%, while the quantitative analysis of these ultrafast PCR assays, indicated that the correlation coefficient (R2) ranged from 0.98 to 0.9903. These results indicate that the developed assays may have sufficient specificity and LOD capacity to detect the eleven specific GM canola events for the attendant management and monitoring, thus preventing GM canola from contaminating the natural environment.</description><subject>Biological Assay</subject><subject>Brassica napus - genetics</subject><subject>DNA, Plant - genetics</subject><subject>Event-specific detection</subject><subject>Genetically modified canola</subject><subject>Limit of Detection</subject><subject>Oilseed rape</subject><subject>Plants, Genetically Modified - genetics</subject><subject>Polymerase Chain Reaction</subject><subject>Ultrafast polymerase chain reaction (PCR)</subject><issn>0308-8146</issn><issn>1873-7072</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkcuOFCEUhonROD2jrzBh6aZ6uFVB7TTtNU6i8bImNHWw6VBFCVQn_Qi-tXRqxq0rEvi-cw7nR-iWki0ltLs7bl2Mgz3AuGWE0S3lVND-CdpQJXkjiWRP0YZwohpFRXeFrnM-EkIYoeo5uuJCUkmU3KA_b-EEIc4jTAVHh5dQknEmF_x19w2bnM05YxcTLgfAFZ1Kk2ew3nmLByhgi4_TRYRwecVmnlM8wYB_wQTFWxPCGY9xqEK9tGaKwax1MvYT_h6XcsCfYwLzAj1zJmR4-XDeoJ_v3_3YfWzuv3z4tHtz31jBRWkcbcHIPeNOGGK7th2gFRIYUdYasd8T4K1UVlDO-rbviFKKUWp6oZzlfav4DXq11q2D_l4gFz36bCEEM0FcsmZtT6pFe17RbkVtijkncHpOfjTprCnRlxj0UT_GoC8x6DWGKt4-9Fj2Iwz_tMe9V-D1CkD96clD0tl6mCwMPtWd6iH6__X4C4AQnfA</recordid><startdate>20220330</startdate><enddate>20220330</enddate><creator>Park, Ji-Eun</creator><creator>Lee, Do-Geun</creator><creator>Kim, Hong-Rae</creator><creator>Kim, Mi-Ju</creator><creator>Kim, Hae-Yeong</creator><creator>Kim, Hyun-Joong</creator><general>Elsevier Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20220330</creationdate><title>Development of ultrafast PCR assays for the event-specific detection of eleven approved genetically modified canola events in South Korea</title><author>Park, Ji-Eun ; Lee, Do-Geun ; Kim, Hong-Rae ; Kim, Mi-Ju ; Kim, Hae-Yeong ; Kim, Hyun-Joong</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c434t-f15ea7b23f4a0c655de547e208cca4bb0e3578c413295960888211a948fc39583</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Biological Assay</topic><topic>Brassica napus - genetics</topic><topic>DNA, Plant - genetics</topic><topic>Event-specific detection</topic><topic>Genetically modified canola</topic><topic>Limit of Detection</topic><topic>Oilseed rape</topic><topic>Plants, Genetically Modified - genetics</topic><topic>Polymerase Chain Reaction</topic><topic>Ultrafast polymerase chain reaction (PCR)</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Park, Ji-Eun</creatorcontrib><creatorcontrib>Lee, Do-Geun</creatorcontrib><creatorcontrib>Kim, Hong-Rae</creatorcontrib><creatorcontrib>Kim, Mi-Ju</creatorcontrib><creatorcontrib>Kim, Hae-Yeong</creatorcontrib><creatorcontrib>Kim, Hyun-Joong</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Food chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Park, Ji-Eun</au><au>Lee, Do-Geun</au><au>Kim, Hong-Rae</au><au>Kim, Mi-Ju</au><au>Kim, Hae-Yeong</au><au>Kim, Hyun-Joong</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Development of ultrafast PCR assays for the event-specific detection of eleven approved genetically modified canola events in South Korea</atitle><jtitle>Food chemistry</jtitle><addtitle>Food Chem</addtitle><date>2022-03-30</date><risdate>2022</risdate><volume>373</volume><issue>Pt A</issue><spage>131419</spage><epage>131419</epage><pages>131419-131419</pages><artnum>131419</artnum><issn>0308-8146</issn><eissn>1873-7072</eissn><abstract>•Ultrafast PCR assays for eleven GM canola events were developed.•The specificities and the detectability of the developed assays were validated.•The developed assays provide rapid and event-specific detection of GM canola events.•The potential quantitative analyses for GM canola events were evaluated.
In Korea, genetically modified (GM) canola events derived from eleven single events have been authorized for food and feed, but not for cultivation. Therefore, the development of a rapid and accurate on-site detection method is crucial for the management of these approved GM canola events. In this study, ultrafast polymerase chain reaction (PCR) assays for the event-specific detection of eleven GM canola events were developed. The limit of detection (LOD) on DNA-based and powder-based GM canola samples of each primer set using the ultrafast PCR ranged from 0.1% to 0.01%, while the quantitative analysis of these ultrafast PCR assays, indicated that the correlation coefficient (R2) ranged from 0.98 to 0.9903. These results indicate that the developed assays may have sufficient specificity and LOD capacity to detect the eleven specific GM canola events for the attendant management and monitoring, thus preventing GM canola from contaminating the natural environment.</abstract><cop>England</cop><pub>Elsevier Ltd</pub><pmid>34717087</pmid><doi>10.1016/j.foodchem.2021.131419</doi><tpages>1</tpages></addata></record> |
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subjects | Biological Assay Brassica napus - genetics DNA, Plant - genetics Event-specific detection Genetically modified canola Limit of Detection Oilseed rape Plants, Genetically Modified - genetics Polymerase Chain Reaction Ultrafast polymerase chain reaction (PCR) |
title | Development of ultrafast PCR assays for the event-specific detection of eleven approved genetically modified canola events in South Korea |
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