Transition and regulation mechanism of bacterial biota in Kishu saba-narezushi (mackerel narezushi) during its fermentation step
The transition of the bacterial biota of Kishu saba-narezushi (mackerel-narezushi) in the Hidaka region of Wakayama prefecture, Japan, was analyzed using amplicon sequencing based on the V3–V4 variable region of the 16S rRNA gene. In the non-fermented sample (0 day), the major genus with the highest...
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Veröffentlicht in: | Journal of bioscience and bioengineering 2021-12, Vol.132 (6), p.606-612 |
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container_title | Journal of bioscience and bioengineering |
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creator | Doi, Ryohei Wu, Yunga Kawai, Yusuke Wang, Lun Zendo, Takeshi Nakamura, Kohei Suzuki, Tohru Shimada, Masaya Hayakawa, Takashi Nakagawa, Tomoyuki |
description | The transition of the bacterial biota of Kishu saba-narezushi (mackerel-narezushi) in the Hidaka region of Wakayama prefecture, Japan, was analyzed using amplicon sequencing based on the V3–V4 variable region of the 16S rRNA gene. In the non-fermented sample (0 day), the major genus with the highest abundance ratio was Staphylococcus. In the early stage (fermentation for 2 days), however, the genus Lactococcus became a dominant species, and in the later stage (fermentation for 5 days), the abundance ratio of the genus Lactobacillus increased significantly. Lactococcus lactis strains isolated from the narezushi samples had the ability to suppress the growth of not only Staphylococcus genera but also Lactobacillus. Moreover, the isolates produced a bacteriocin, which was identified as nisin Z. On the basis of these results, it is concluded that L. lactis plays an important role in preparing the fermentation conditions of Kishu saba-narezushi in the early stage by suppressing unwanted microorganisms using lactic acid and nisin Z. |
doi_str_mv | 10.1016/j.jbiosc.2021.09.002 |
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In the non-fermented sample (0 day), the major genus with the highest abundance ratio was Staphylococcus. In the early stage (fermentation for 2 days), however, the genus Lactococcus became a dominant species, and in the later stage (fermentation for 5 days), the abundance ratio of the genus Lactobacillus increased significantly. Lactococcus lactis strains isolated from the narezushi samples had the ability to suppress the growth of not only Staphylococcus genera but also Lactobacillus. Moreover, the isolates produced a bacteriocin, which was identified as nisin Z. On the basis of these results, it is concluded that L. lactis plays an important role in preparing the fermentation conditions of Kishu saba-narezushi in the early stage by suppressing unwanted microorganisms using lactic acid and nisin Z.</description><identifier>ISSN: 1389-1723</identifier><identifier>EISSN: 1347-4421</identifier><identifier>DOI: 10.1016/j.jbiosc.2021.09.002</identifier><language>eng</language><publisher>Elsevier B.V</publisher><subject>Kishu saba-narezushi ; Lactiplantibacillus plantarum ; Lactococcus lactis ; Microbiota ; Nisin Z</subject><ispartof>Journal of bioscience and bioengineering, 2021-12, Vol.132 (6), p.606-612</ispartof><rights>2021 The Society for Biotechnology, Japan</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c522t-748f53d9bdc04ff3741620f284903b213378025ed54e732e0d85d9f0c6feaa483</citedby><cites>FETCH-LOGICAL-c522t-748f53d9bdc04ff3741620f284903b213378025ed54e732e0d85d9f0c6feaa483</cites><orcidid>0000-0003-0112-0349</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S1389172321002346$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids></links><search><creatorcontrib>Doi, Ryohei</creatorcontrib><creatorcontrib>Wu, Yunga</creatorcontrib><creatorcontrib>Kawai, Yusuke</creatorcontrib><creatorcontrib>Wang, Lun</creatorcontrib><creatorcontrib>Zendo, Takeshi</creatorcontrib><creatorcontrib>Nakamura, Kohei</creatorcontrib><creatorcontrib>Suzuki, Tohru</creatorcontrib><creatorcontrib>Shimada, Masaya</creatorcontrib><creatorcontrib>Hayakawa, Takashi</creatorcontrib><creatorcontrib>Nakagawa, Tomoyuki</creatorcontrib><title>Transition and regulation mechanism of bacterial biota in Kishu saba-narezushi (mackerel narezushi) during its fermentation step</title><title>Journal of bioscience and bioengineering</title><description>The transition of the bacterial biota of Kishu saba-narezushi (mackerel-narezushi) in the Hidaka region of Wakayama prefecture, Japan, was analyzed using amplicon sequencing based on the V3–V4 variable region of the 16S rRNA gene. In the non-fermented sample (0 day), the major genus with the highest abundance ratio was Staphylococcus. In the early stage (fermentation for 2 days), however, the genus Lactococcus became a dominant species, and in the later stage (fermentation for 5 days), the abundance ratio of the genus Lactobacillus increased significantly. Lactococcus lactis strains isolated from the narezushi samples had the ability to suppress the growth of not only Staphylococcus genera but also Lactobacillus. Moreover, the isolates produced a bacteriocin, which was identified as nisin Z. On the basis of these results, it is concluded that L. lactis plays an important role in preparing the fermentation conditions of Kishu saba-narezushi in the early stage by suppressing unwanted microorganisms using lactic acid and nisin Z.</description><subject>Kishu saba-narezushi</subject><subject>Lactiplantibacillus plantarum</subject><subject>Lactococcus lactis</subject><subject>Microbiota</subject><subject>Nisin Z</subject><issn>1389-1723</issn><issn>1347-4421</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><recordid>eNp9kEtv1TAQhSNEJUrLP2DhZVkkHT9ynWyQUEWhohKbsrYce9zrS-JcPA4SXfWnk0sQS1bz0DlzNF9VveXQcOC760NzGOJMrhEgeAN9AyBeVOdcKl0rJfjLU9_1NddCvqpeEx0AuAbNz6vnh2wTxRLnxGzyLOPjMto_44Rub1Okic2BDdYVzNGObE0qlsXEvkTaL4zsYOtkMz4ttI_sarLuO2Yc2b_dO-aXHNMji4VYwDxhKlsCFTxeVmfBjoRv_taL6tvtx4ebz_X91093Nx_ua9cKUWqtutBK3w_egQpBasV3AoLoVA9yEFxK3YFo0bcKtRQIvmt9H8DtAlqrOnlRXW13j3n-sSAVM0VyOI424byQEa3e9VxoIVap2qQuz0QZgznmONn8y3AwJ-DmYDbg5gTcQG9W4Kvt_WbD9Y2fEbMhFzE59DGjK8bP8f8HfgN_eo15</recordid><startdate>20211201</startdate><enddate>20211201</enddate><creator>Doi, Ryohei</creator><creator>Wu, Yunga</creator><creator>Kawai, Yusuke</creator><creator>Wang, Lun</creator><creator>Zendo, Takeshi</creator><creator>Nakamura, Kohei</creator><creator>Suzuki, Tohru</creator><creator>Shimada, Masaya</creator><creator>Hayakawa, Takashi</creator><creator>Nakagawa, Tomoyuki</creator><general>Elsevier B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0003-0112-0349</orcidid></search><sort><creationdate>20211201</creationdate><title>Transition and regulation mechanism of bacterial biota in Kishu saba-narezushi (mackerel narezushi) during its fermentation step</title><author>Doi, Ryohei ; Wu, Yunga ; Kawai, Yusuke ; Wang, Lun ; Zendo, Takeshi ; Nakamura, Kohei ; Suzuki, Tohru ; Shimada, Masaya ; Hayakawa, Takashi ; Nakagawa, Tomoyuki</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c522t-748f53d9bdc04ff3741620f284903b213378025ed54e732e0d85d9f0c6feaa483</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Kishu saba-narezushi</topic><topic>Lactiplantibacillus plantarum</topic><topic>Lactococcus lactis</topic><topic>Microbiota</topic><topic>Nisin Z</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Doi, Ryohei</creatorcontrib><creatorcontrib>Wu, Yunga</creatorcontrib><creatorcontrib>Kawai, Yusuke</creatorcontrib><creatorcontrib>Wang, Lun</creatorcontrib><creatorcontrib>Zendo, Takeshi</creatorcontrib><creatorcontrib>Nakamura, Kohei</creatorcontrib><creatorcontrib>Suzuki, Tohru</creatorcontrib><creatorcontrib>Shimada, Masaya</creatorcontrib><creatorcontrib>Hayakawa, Takashi</creatorcontrib><creatorcontrib>Nakagawa, Tomoyuki</creatorcontrib><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of bioscience and bioengineering</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Doi, Ryohei</au><au>Wu, Yunga</au><au>Kawai, Yusuke</au><au>Wang, Lun</au><au>Zendo, Takeshi</au><au>Nakamura, Kohei</au><au>Suzuki, Tohru</au><au>Shimada, Masaya</au><au>Hayakawa, Takashi</au><au>Nakagawa, Tomoyuki</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Transition and regulation mechanism of bacterial biota in Kishu saba-narezushi (mackerel narezushi) during its fermentation step</atitle><jtitle>Journal of bioscience and bioengineering</jtitle><date>2021-12-01</date><risdate>2021</risdate><volume>132</volume><issue>6</issue><spage>606</spage><epage>612</epage><pages>606-612</pages><issn>1389-1723</issn><eissn>1347-4421</eissn><abstract>The transition of the bacterial biota of Kishu saba-narezushi (mackerel-narezushi) in the Hidaka region of Wakayama prefecture, Japan, was analyzed using amplicon sequencing based on the V3–V4 variable region of the 16S rRNA gene. In the non-fermented sample (0 day), the major genus with the highest abundance ratio was Staphylococcus. In the early stage (fermentation for 2 days), however, the genus Lactococcus became a dominant species, and in the later stage (fermentation for 5 days), the abundance ratio of the genus Lactobacillus increased significantly. Lactococcus lactis strains isolated from the narezushi samples had the ability to suppress the growth of not only Staphylococcus genera but also Lactobacillus. Moreover, the isolates produced a bacteriocin, which was identified as nisin Z. 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subjects | Kishu saba-narezushi Lactiplantibacillus plantarum Lactococcus lactis Microbiota Nisin Z |
title | Transition and regulation mechanism of bacterial biota in Kishu saba-narezushi (mackerel narezushi) during its fermentation step |
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