Comparative Study of Oral Bacteria and Fungi Microbiota in Tibetan and Chinese Han Living at Different Altitude
Knowledge about the impact of altitude and ethnicity on human oral microbiota is currently limited. To obtain the baseline of normal salivary microbiota, we analyzed the bacteria and fungi composition in Tibetan (HY group) and Han population (CD group) living at different altitudes by using next-gen...
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Veröffentlicht in: | The Tohoku Journal of Experimental Medicine 2021, Vol.254(2), pp.129-139 |
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creator | Dong, Ke Wu, Kunpeng Zheng, Tianli Yue, Ji Wang, Weipeng Luo, Ruocheng You, Lan He, Xun Li, Jingjing Hong, Zehui Zuo, Haojiang Pei, Xiaofang |
description | Knowledge about the impact of altitude and ethnicity on human oral microbiota is currently limited. To obtain the baseline of normal salivary microbiota, we analyzed the bacteria and fungi composition in Tibetan (HY group) and Han population (CD group) living at different altitudes by using next-generation sequencing (NGS) technology combined with PICRUSt and FUNGuild analyses. There were significant differences in oral microbiota composition between the two groups at phylum and genus levels. At the phylum level, the HY group had higher relative abundances of Firmicutes and Ascomycota, whereas the Bacteroidetes and Basidiomycota in the CD group were richer. These changes at the phylum level reflected different dominant genus compositions. Compared with the Han population, Candida, Fusarium, Zopfiella, Streptococcus, Veillonella and Rothia in Tibetan were higher. Surprisingly, the Zopfiella was found almost exclusively in the Tibetan. The PICRUSt and FUNGuild analysis also indicated that the function of the bacterial and fungal communities was altered between the two groups. In conclusion, our results suggest that there are significant differences in oral microbial structure and metabolic characteristics and trophic modes among Tibetan and Han population living at different altitudes. We first established the oral microbiota framework and represented a critical step for determining the diversity of oral microbiota in the Tibetan and Han population. |
doi_str_mv | 10.1620/tjem.254.129 |
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To obtain the baseline of normal salivary microbiota, we analyzed the bacteria and fungi composition in Tibetan (HY group) and Han population (CD group) living at different altitudes by using next-generation sequencing (NGS) technology combined with PICRUSt and FUNGuild analyses. There were significant differences in oral microbiota composition between the two groups at phylum and genus levels. At the phylum level, the HY group had higher relative abundances of Firmicutes and Ascomycota, whereas the Bacteroidetes and Basidiomycota in the CD group were richer. These changes at the phylum level reflected different dominant genus compositions. Compared with the Han population, Candida, Fusarium, Zopfiella, Streptococcus, Veillonella and Rothia in Tibetan were higher. Surprisingly, the Zopfiella was found almost exclusively in the Tibetan. The PICRUSt and FUNGuild analysis also indicated that the function of the bacterial and fungal communities was altered between the two groups. In conclusion, our results suggest that there are significant differences in oral microbial structure and metabolic characteristics and trophic modes among Tibetan and Han population living at different altitudes. We first established the oral microbiota framework and represented a critical step for determining the diversity of oral microbiota in the Tibetan and Han population.</description><identifier>ISSN: 0040-8727</identifier><identifier>EISSN: 1349-3329</identifier><identifier>DOI: 10.1620/tjem.254.129</identifier><language>eng</language><publisher>Tohoku University Medical Press</publisher><subject>16S rRNA gene sequencing ; Internal Transcribed Spacer 1 (ITS1) ; oral microbiota ; plateau environment ; saliva</subject><ispartof>The Tohoku Journal of Experimental Medicine, 2021, Vol.254(2), pp.129-139</ispartof><rights>2021 Tohoku University Medical Press</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c554t-3f2ec32acc389b79dbc1123c175233ee323d0cb85a528889317eaaa0913785233</citedby><cites>FETCH-LOGICAL-c554t-3f2ec32acc389b79dbc1123c175233ee323d0cb85a528889317eaaa0913785233</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,1883,4024,27923,27924,27925</link.rule.ids></links><search><creatorcontrib>Dong, Ke</creatorcontrib><creatorcontrib>Wu, Kunpeng</creatorcontrib><creatorcontrib>Zheng, Tianli</creatorcontrib><creatorcontrib>Yue, Ji</creatorcontrib><creatorcontrib>Wang, Weipeng</creatorcontrib><creatorcontrib>Luo, Ruocheng</creatorcontrib><creatorcontrib>You, Lan</creatorcontrib><creatorcontrib>He, Xun</creatorcontrib><creatorcontrib>Li, Jingjing</creatorcontrib><creatorcontrib>Hong, Zehui</creatorcontrib><creatorcontrib>Zuo, Haojiang</creatorcontrib><creatorcontrib>Pei, Xiaofang</creatorcontrib><title>Comparative Study of Oral Bacteria and Fungi Microbiota in Tibetan and Chinese Han Living at Different Altitude</title><title>The Tohoku Journal of Experimental Medicine</title><addtitle>Tohoku J. Exp. Med.</addtitle><description>Knowledge about the impact of altitude and ethnicity on human oral microbiota is currently limited. To obtain the baseline of normal salivary microbiota, we analyzed the bacteria and fungi composition in Tibetan (HY group) and Han population (CD group) living at different altitudes by using next-generation sequencing (NGS) technology combined with PICRUSt and FUNGuild analyses. There were significant differences in oral microbiota composition between the two groups at phylum and genus levels. At the phylum level, the HY group had higher relative abundances of Firmicutes and Ascomycota, whereas the Bacteroidetes and Basidiomycota in the CD group were richer. These changes at the phylum level reflected different dominant genus compositions. Compared with the Han population, Candida, Fusarium, Zopfiella, Streptococcus, Veillonella and Rothia in Tibetan were higher. Surprisingly, the Zopfiella was found almost exclusively in the Tibetan. The PICRUSt and FUNGuild analysis also indicated that the function of the bacterial and fungal communities was altered between the two groups. In conclusion, our results suggest that there are significant differences in oral microbial structure and metabolic characteristics and trophic modes among Tibetan and Han population living at different altitudes. We first established the oral microbiota framework and represented a critical step for determining the diversity of oral microbiota in the Tibetan and Han population.</description><subject>16S rRNA gene sequencing</subject><subject>Internal Transcribed Spacer 1 (ITS1)</subject><subject>oral microbiota</subject><subject>plateau environment</subject><subject>saliva</subject><issn>0040-8727</issn><issn>1349-3329</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><recordid>eNpFkE1PwkAQhjdGExG9-QP26MHifrR0exNRxATDQTw302UKS8oWd7ck_HtbUTxNJvO8bzIPIbecDfhQsIewwe1AJPGAi-yM9LiMs0hKkZ2THmMxi1Qq0kty5f2GMRmzdNgj9bje7sBBMHukH6FZHmhd0rmDij6BDugMULBLOmnsytB3o11dmDoANZYuTIEB7M99vDYWPdJpu8_M3tgVhUCfTVmiQxvoqAqmbcdrclFC5fHmd_bJ5-RlMZ5Gs_nr23g0i3SSxCGSpUAtBWgtVVak2bLQnAupeZoIKRGlkEumC5VAIpRSmeQpAgDLuExVh_TJ3bF35-qvBn3It8ZrrCqwWDc-by2liUyU6tD7I9r-5r3DMt85swV3yDnLO69557VL5K3XFn884hsfYIUnGFwwusJ_WPxFTie9Bpejld_r3IKV</recordid><startdate>2021</startdate><enddate>2021</enddate><creator>Dong, Ke</creator><creator>Wu, Kunpeng</creator><creator>Zheng, Tianli</creator><creator>Yue, Ji</creator><creator>Wang, Weipeng</creator><creator>Luo, Ruocheng</creator><creator>You, Lan</creator><creator>He, Xun</creator><creator>Li, Jingjing</creator><creator>Hong, Zehui</creator><creator>Zuo, Haojiang</creator><creator>Pei, Xiaofang</creator><general>Tohoku University Medical Press</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>2021</creationdate><title>Comparative Study of Oral Bacteria and Fungi Microbiota in Tibetan and Chinese Han Living at Different Altitude</title><author>Dong, Ke ; Wu, Kunpeng ; Zheng, Tianli ; Yue, Ji ; Wang, Weipeng ; Luo, Ruocheng ; You, Lan ; He, Xun ; Li, Jingjing ; Hong, Zehui ; Zuo, Haojiang ; Pei, Xiaofang</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c554t-3f2ec32acc389b79dbc1123c175233ee323d0cb85a528889317eaaa0913785233</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>16S rRNA gene sequencing</topic><topic>Internal Transcribed Spacer 1 (ITS1)</topic><topic>oral microbiota</topic><topic>plateau environment</topic><topic>saliva</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Dong, Ke</creatorcontrib><creatorcontrib>Wu, Kunpeng</creatorcontrib><creatorcontrib>Zheng, Tianli</creatorcontrib><creatorcontrib>Yue, Ji</creatorcontrib><creatorcontrib>Wang, Weipeng</creatorcontrib><creatorcontrib>Luo, Ruocheng</creatorcontrib><creatorcontrib>You, Lan</creatorcontrib><creatorcontrib>He, Xun</creatorcontrib><creatorcontrib>Li, Jingjing</creatorcontrib><creatorcontrib>Hong, Zehui</creatorcontrib><creatorcontrib>Zuo, Haojiang</creatorcontrib><creatorcontrib>Pei, Xiaofang</creatorcontrib><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>The Tohoku Journal of Experimental Medicine</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Dong, Ke</au><au>Wu, Kunpeng</au><au>Zheng, Tianli</au><au>Yue, Ji</au><au>Wang, Weipeng</au><au>Luo, Ruocheng</au><au>You, Lan</au><au>He, Xun</au><au>Li, Jingjing</au><au>Hong, Zehui</au><au>Zuo, Haojiang</au><au>Pei, Xiaofang</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Comparative Study of Oral Bacteria and Fungi Microbiota in Tibetan and Chinese Han Living at Different Altitude</atitle><jtitle>The Tohoku Journal of Experimental Medicine</jtitle><addtitle>Tohoku J. Exp. Med.</addtitle><date>2021</date><risdate>2021</risdate><volume>254</volume><issue>2</issue><spage>129</spage><epage>139</epage><pages>129-139</pages><issn>0040-8727</issn><eissn>1349-3329</eissn><abstract>Knowledge about the impact of altitude and ethnicity on human oral microbiota is currently limited. To obtain the baseline of normal salivary microbiota, we analyzed the bacteria and fungi composition in Tibetan (HY group) and Han population (CD group) living at different altitudes by using next-generation sequencing (NGS) technology combined with PICRUSt and FUNGuild analyses. There were significant differences in oral microbiota composition between the two groups at phylum and genus levels. At the phylum level, the HY group had higher relative abundances of Firmicutes and Ascomycota, whereas the Bacteroidetes and Basidiomycota in the CD group were richer. These changes at the phylum level reflected different dominant genus compositions. 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subjects | 16S rRNA gene sequencing Internal Transcribed Spacer 1 (ITS1) oral microbiota plateau environment saliva |
title | Comparative Study of Oral Bacteria and Fungi Microbiota in Tibetan and Chinese Han Living at Different Altitude |
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