Frequency of frontotemporal dementia-related gene variants in Turkey

•GRN mutation frequency is higher than the other FTD related genes in Turkish cases•VCP, TARDBP, CHMP2B and FUS can be observed in FTD cases based on clinical evidence•FTD-related genes sequencing is useful in determining genetic etiology, new variants Just as its clinical heterogeneity, genetic bas...

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Veröffentlicht in:Neurobiology of aging 2021-10, Vol.106, p.332.e1-332.e11
Hauptverfasser: Artan, Sevilhan, Erzurumluoglu Gokalp, Ebru, Samanci, Bedia, Ozbabalik Adapinar, Demet, Bas, Hasan, Tepgec, Fatih, Qomi Ekenel, Emilia, Cilingir, Oguz, Bilgic, Basar, Gurvit, Hakan, Hanagasi, Hasmet Ayhan, Kocagil, Sinem, Durak Aras, Beyhan, Uyguner, Oya, Emre, Murat
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container_end_page 332.e11
container_issue
container_start_page 332.e1
container_title Neurobiology of aging
container_volume 106
creator Artan, Sevilhan
Erzurumluoglu Gokalp, Ebru
Samanci, Bedia
Ozbabalik Adapinar, Demet
Bas, Hasan
Tepgec, Fatih
Qomi Ekenel, Emilia
Cilingir, Oguz
Bilgic, Basar
Gurvit, Hakan
Hanagasi, Hasmet Ayhan
Kocagil, Sinem
Durak Aras, Beyhan
Uyguner, Oya
Emre, Murat
description •GRN mutation frequency is higher than the other FTD related genes in Turkish cases•VCP, TARDBP, CHMP2B and FUS can be observed in FTD cases based on clinical evidence•FTD-related genes sequencing is useful in determining genetic etiology, new variants Just as its clinical heterogeneity, genetic basis of Frontotemporal dementia (FTD) is also diverse and multiple molecular pathways are thought to be involved in disease pathogenesis. In the present study, FTD- related genes were evaluated in a Turkish cohort of 175 index FTD patients with a gene panel including GRN, MAPT, TARDBP, FUS, CHMP2B and VCP genes. Potential genetic associations were prospected in 16 patients (9.1%); five variants (p.(Gly35Glufs) and p.(Cys253Ter) in GRN; p.(Arg95Cys) in VCP; p.(Met405Val) in TARDBP and p.(Pro636Leu) in MAPT) were classified as pathogenic (P) or likely pathogenic (LP), in four familial and one sporadic patients. Three novel variants in MAPT, CHMP2B and FUS were also identified in familial cases. The most common pathogenic variants were observed in the GRN gene with a frequency of 1.14% (2/175) and this rate was 4.57% (8/175), including variants of uncertain significance (VUS). In this study with the largest cohort of Turkish FTD patients, GRN and MAPT variants were identified as the most common genetic associations; and rare causes like VCP, TARDBP, CHMP2B and FUS variants are recommended to be considered in patients with compatible clinical findings.
doi_str_mv 10.1016/j.neurobiolaging.2021.05.007
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In the present study, FTD- related genes were evaluated in a Turkish cohort of 175 index FTD patients with a gene panel including GRN, MAPT, TARDBP, FUS, CHMP2B and VCP genes. Potential genetic associations were prospected in 16 patients (9.1%); five variants (p.(Gly35Glufs) and p.(Cys253Ter) in GRN; p.(Arg95Cys) in VCP; p.(Met405Val) in TARDBP and p.(Pro636Leu) in MAPT) were classified as pathogenic (P) or likely pathogenic (LP), in four familial and one sporadic patients. Three novel variants in MAPT, CHMP2B and FUS were also identified in familial cases. The most common pathogenic variants were observed in the GRN gene with a frequency of 1.14% (2/175) and this rate was 4.57% (8/175), including variants of uncertain significance (VUS). 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In the present study, FTD- related genes were evaluated in a Turkish cohort of 175 index FTD patients with a gene panel including GRN, MAPT, TARDBP, FUS, CHMP2B and VCP genes. Potential genetic associations were prospected in 16 patients (9.1%); five variants (p.(Gly35Glufs) and p.(Cys253Ter) in GRN; p.(Arg95Cys) in VCP; p.(Met405Val) in TARDBP and p.(Pro636Leu) in MAPT) were classified as pathogenic (P) or likely pathogenic (LP), in four familial and one sporadic patients. Three novel variants in MAPT, CHMP2B and FUS were also identified in familial cases. The most common pathogenic variants were observed in the GRN gene with a frequency of 1.14% (2/175) and this rate was 4.57% (8/175), including variants of uncertain significance (VUS). In this study with the largest cohort of Turkish FTD patients, GRN and MAPT variants were identified as the most common genetic associations; and rare causes like VCP, TARDBP, CHMP2B and FUS variants are recommended to be considered in patients with compatible clinical findings.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>34162492</pmid><doi>10.1016/j.neurobiolaging.2021.05.007</doi><orcidid>https://orcid.org/0000-0002-1275-5174</orcidid><orcidid>https://orcid.org/0000-0001-6032-0856</orcidid><orcidid>https://orcid.org/0000-0001-7658-6309</orcidid><orcidid>https://orcid.org/0000-0003-2595-3919</orcidid><orcidid>https://orcid.org/0000-0003-3475-564X</orcidid><orcidid>https://orcid.org/0000-0002-4624-4428</orcidid></addata></record>
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subjects Aged
Cohort Studies
DNA-Binding Proteins - genetics
Endosomal Sorting Complexes Required for Transport - genetics
Female
Frontotemporal dementia
Frontotemporal Dementia - epidemiology
Frontotemporal Dementia - genetics
Gene Frequency - genetics
Genetic Association Studies - methods
Genetic Variation - genetics
High-Throughput Nucleotide Sequencing - methods
Humans
Male
Middle Aged
Next generation sequencing
Progranulins - genetics
RNA-Binding Protein FUS - genetics
tau Proteins - genetics
Turkey
Turkey - epidemiology
Valosin Containing Protein - genetics
title Frequency of frontotemporal dementia-related gene variants in Turkey
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