Polyhydroxybutyrate (PHB) Production Using an Arabinose-Inducible Expression System in Comparison With Cold Shock Inducible Expression System in Escherichia coli

strain A-04 has shown 16S rRNA gene identity to the well-known industrial strain H16. Nevertheless, the cell characteristics and polyhydroxyalkanoate (PHA) production ability of strain A-04 were different from those of H16. This study aimed to express PHA biosynthesis genes of strain A-04 in via an...

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Veröffentlicht in:Frontiers in bioengineering and biotechnology 2021-05, Vol.9, p.661096-661096
Hauptverfasser: Napathorn, Suchada Chanprateep, Visetkoop, Sirirat, Pinyakong, Onruthai, Okano, Kenji, Honda, Kohsuke
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Okano, Kenji
Honda, Kohsuke
description strain A-04 has shown 16S rRNA gene identity to the well-known industrial strain H16. Nevertheless, the cell characteristics and polyhydroxyalkanoate (PHA) production ability of strain A-04 were different from those of H16. This study aimed to express PHA biosynthesis genes of strain A-04 in via an arabinose-inducible expression system. In this study, the PHA biosynthesis operon of strain A-04, consisting of three genes encoding acetyl-CoA acetyltransferase ( , 1182 bp, 40.6 kDa), acetoacetyl-CoA reductase ( , 741 bp, 26.4 kDa) and PHB synthase Class I ( , 1770 bp), was identified. Sequence analysis of the , , and phaC genes revealed that was 99% similar to from H16. The difference in amino acid residue situated at position 122 of was proline, whereas that of H16 was leucine. The intact operon was cloned into the arabinose-inducible araBAD promoter and transformed into strains Top 10, JM109 and XL-1 blue. The results showed that optimal conditions obtained from shaken flask experiments yielded 6.1 ± 1.1 g/L cell dry mass (CDM), a PHB content of 93.3 ± 0.9% (w/w) and a productivity of 0.24 g/(L⋅h), whereas the wild-type strain A-04 accumulated 78% (w/w) PHB with a productivity of 0.09 g/(L⋅h). Finally, for the scaled-up studies, fed-batch cultivations by pH-stat control in a 5-L fermenter of strains XL1-Blue harboring pBAD/Thio-TOPO- and pColdTF- in MR or LB medium, leading to a PHB production of 31.4 ± 0.9 g/L at 54 h with a PHB content of 83.0 ± 3.8% (w/w), a CDM of 37.8 ± 1.2 g/L, a Y value of 0.39 g PHB/g glucose and a productivity of 0.6 g PHB/(L⋅h) using pColdTF- in MR medium. In addition, PHB production was 29.0 ± 1.1 g/L with 60.2 ± 2.3% PHB content in the CDM of 53.1 ± 1.0 g/L, a Y value of 0.21 g PHB/g glucose and a productivity of 0.4 g PHB/(L⋅h) using pBAD/Thio-TOPO- in LB medium. Thus, a relatively high PHB concentration and productivity were achieved, which demonstrated the possibility of industrial production of PHB.
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Nevertheless, the cell characteristics and polyhydroxyalkanoate (PHA) production ability of strain A-04 were different from those of H16. This study aimed to express PHA biosynthesis genes of strain A-04 in via an arabinose-inducible expression system. In this study, the PHA biosynthesis operon of strain A-04, consisting of three genes encoding acetyl-CoA acetyltransferase ( , 1182 bp, 40.6 kDa), acetoacetyl-CoA reductase ( , 741 bp, 26.4 kDa) and PHB synthase Class I ( , 1770 bp), was identified. Sequence analysis of the , , and phaC genes revealed that was 99% similar to from H16. The difference in amino acid residue situated at position 122 of was proline, whereas that of H16 was leucine. The intact operon was cloned into the arabinose-inducible araBAD promoter and transformed into strains Top 10, JM109 and XL-1 blue. The results showed that optimal conditions obtained from shaken flask experiments yielded 6.1 ± 1.1 g/L cell dry mass (CDM), a PHB content of 93.3 ± 0.9% (w/w) and a productivity of 0.24 g/(L⋅h), whereas the wild-type strain A-04 accumulated 78% (w/w) PHB with a productivity of 0.09 g/(L⋅h). Finally, for the scaled-up studies, fed-batch cultivations by pH-stat control in a 5-L fermenter of strains XL1-Blue harboring pBAD/Thio-TOPO- and pColdTF- in MR or LB medium, leading to a PHB production of 31.4 ± 0.9 g/L at 54 h with a PHB content of 83.0 ± 3.8% (w/w), a CDM of 37.8 ± 1.2 g/L, a Y value of 0.39 g PHB/g glucose and a productivity of 0.6 g PHB/(L⋅h) using pColdTF- in MR medium. In addition, PHB production was 29.0 ± 1.1 g/L with 60.2 ± 2.3% PHB content in the CDM of 53.1 ± 1.0 g/L, a Y value of 0.21 g PHB/g glucose and a productivity of 0.4 g PHB/(L⋅h) using pBAD/Thio-TOPO- in LB medium. 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Nevertheless, the cell characteristics and polyhydroxyalkanoate (PHA) production ability of strain A-04 were different from those of H16. This study aimed to express PHA biosynthesis genes of strain A-04 in via an arabinose-inducible expression system. In this study, the PHA biosynthesis operon of strain A-04, consisting of three genes encoding acetyl-CoA acetyltransferase ( , 1182 bp, 40.6 kDa), acetoacetyl-CoA reductase ( , 741 bp, 26.4 kDa) and PHB synthase Class I ( , 1770 bp), was identified. Sequence analysis of the , , and phaC genes revealed that was 99% similar to from H16. The difference in amino acid residue situated at position 122 of was proline, whereas that of H16 was leucine. The intact operon was cloned into the arabinose-inducible araBAD promoter and transformed into strains Top 10, JM109 and XL-1 blue. The results showed that optimal conditions obtained from shaken flask experiments yielded 6.1 ± 1.1 g/L cell dry mass (CDM), a PHB content of 93.3 ± 0.9% (w/w) and a productivity of 0.24 g/(L⋅h), whereas the wild-type strain A-04 accumulated 78% (w/w) PHB with a productivity of 0.09 g/(L⋅h). Finally, for the scaled-up studies, fed-batch cultivations by pH-stat control in a 5-L fermenter of strains XL1-Blue harboring pBAD/Thio-TOPO- and pColdTF- in MR or LB medium, leading to a PHB production of 31.4 ± 0.9 g/L at 54 h with a PHB content of 83.0 ± 3.8% (w/w), a CDM of 37.8 ± 1.2 g/L, a Y value of 0.39 g PHB/g glucose and a productivity of 0.6 g PHB/(L⋅h) using pColdTF- in MR medium. In addition, PHB production was 29.0 ± 1.1 g/L with 60.2 ± 2.3% PHB content in the CDM of 53.1 ± 1.0 g/L, a Y value of 0.21 g PHB/g glucose and a productivity of 0.4 g PHB/(L⋅h) using pBAD/Thio-TOPO- in LB medium. Thus, a relatively high PHB concentration and productivity were achieved, which demonstrated the possibility of industrial production of PHB.</description><subject>araBAD promoter</subject><subject>Bioengineering and Biotechnology</subject><subject>Cupriavidus necator</subject><subject>pH stat feeding strategy</subject><subject>polyhydroxybutyrate</subject><subject>recombinant E. coli</subject><issn>2296-4185</issn><issn>2296-4185</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>DOA</sourceid><recordid>eNqFks1u1DAUhSMEolXpA7BBXpZFBv8n2SCV0dCOVImRSsXSsp2biUsSD3ZSNY_Dm9bTKVW7YmXfe8_5bF2dLPtI8IKxsvrSGOdhQTElCykJruSb7JjSSuaclOLti_tRdhrjLcaYUFGIkr7PjhhPRSWK4-zvxndzO9fB389mGuegR0Bnm8tvn9Em-Hqyo_MDuolu2CI9oPOgjRt8hHw9pKEzHaDV_S5AjHvd9RxH6JEb0NL3Ox1cTM1fbmxT3dXouvX2N_qPcxVtC8HZ1mlkfec-ZO8a3UU4fTpPspvvq5_Ly_zqx8V6eX6VWy7FmDNeC8YKI-sCMLNYSNnIkkgoMDUlS8vglvFCGFbrsmxASiOA80ZqCYZbyk6y9YFbe32rdsH1OszKa6ceGz5slQ6jsx0ozQyhJTFV2iOvmNUMcKNrWRhaECxtYn09sHaT6aG2MIxBd6-gryeDa9XW36mSUCkFToCzJ0DwfyaIo-pdtNB1egA_RUUFrSpepiAkKTlIbfAxBmienyFY7ZOiHpOi9klRh6Qkz6eX_3t2_MsFewAYIL28</recordid><startdate>20210503</startdate><enddate>20210503</enddate><creator>Napathorn, Suchada Chanprateep</creator><creator>Visetkoop, Sirirat</creator><creator>Pinyakong, Onruthai</creator><creator>Okano, Kenji</creator><creator>Honda, Kohsuke</creator><general>Frontiers Media S.A</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20210503</creationdate><title>Polyhydroxybutyrate (PHB) Production Using an Arabinose-Inducible Expression System in Comparison With Cold Shock Inducible Expression System in Escherichia coli</title><author>Napathorn, Suchada Chanprateep ; Visetkoop, Sirirat ; Pinyakong, Onruthai ; Okano, Kenji ; Honda, Kohsuke</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c465t-34d5337b6d7e03c0566f6816e702b832964c3475b3da88fe66b5e44f6a6eb4c23</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>araBAD promoter</topic><topic>Bioengineering and Biotechnology</topic><topic>Cupriavidus necator</topic><topic>pH stat feeding strategy</topic><topic>polyhydroxybutyrate</topic><topic>recombinant E. coli</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Napathorn, Suchada Chanprateep</creatorcontrib><creatorcontrib>Visetkoop, Sirirat</creatorcontrib><creatorcontrib>Pinyakong, Onruthai</creatorcontrib><creatorcontrib>Okano, Kenji</creatorcontrib><creatorcontrib>Honda, Kohsuke</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Frontiers in bioengineering and biotechnology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Napathorn, Suchada Chanprateep</au><au>Visetkoop, Sirirat</au><au>Pinyakong, Onruthai</au><au>Okano, Kenji</au><au>Honda, Kohsuke</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Polyhydroxybutyrate (PHB) Production Using an Arabinose-Inducible Expression System in Comparison With Cold Shock Inducible Expression System in Escherichia coli</atitle><jtitle>Frontiers in bioengineering and biotechnology</jtitle><addtitle>Front Bioeng Biotechnol</addtitle><date>2021-05-03</date><risdate>2021</risdate><volume>9</volume><spage>661096</spage><epage>661096</epage><pages>661096-661096</pages><issn>2296-4185</issn><eissn>2296-4185</eissn><abstract>strain A-04 has shown 16S rRNA gene identity to the well-known industrial strain H16. Nevertheless, the cell characteristics and polyhydroxyalkanoate (PHA) production ability of strain A-04 were different from those of H16. This study aimed to express PHA biosynthesis genes of strain A-04 in via an arabinose-inducible expression system. In this study, the PHA biosynthesis operon of strain A-04, consisting of three genes encoding acetyl-CoA acetyltransferase ( , 1182 bp, 40.6 kDa), acetoacetyl-CoA reductase ( , 741 bp, 26.4 kDa) and PHB synthase Class I ( , 1770 bp), was identified. Sequence analysis of the , , and phaC genes revealed that was 99% similar to from H16. The difference in amino acid residue situated at position 122 of was proline, whereas that of H16 was leucine. The intact operon was cloned into the arabinose-inducible araBAD promoter and transformed into strains Top 10, JM109 and XL-1 blue. The results showed that optimal conditions obtained from shaken flask experiments yielded 6.1 ± 1.1 g/L cell dry mass (CDM), a PHB content of 93.3 ± 0.9% (w/w) and a productivity of 0.24 g/(L⋅h), whereas the wild-type strain A-04 accumulated 78% (w/w) PHB with a productivity of 0.09 g/(L⋅h). Finally, for the scaled-up studies, fed-batch cultivations by pH-stat control in a 5-L fermenter of strains XL1-Blue harboring pBAD/Thio-TOPO- and pColdTF- in MR or LB medium, leading to a PHB production of 31.4 ± 0.9 g/L at 54 h with a PHB content of 83.0 ± 3.8% (w/w), a CDM of 37.8 ± 1.2 g/L, a Y value of 0.39 g PHB/g glucose and a productivity of 0.6 g PHB/(L⋅h) using pColdTF- in MR medium. In addition, PHB production was 29.0 ± 1.1 g/L with 60.2 ± 2.3% PHB content in the CDM of 53.1 ± 1.0 g/L, a Y value of 0.21 g PHB/g glucose and a productivity of 0.4 g PHB/(L⋅h) using pBAD/Thio-TOPO- in LB medium. Thus, a relatively high PHB concentration and productivity were achieved, which demonstrated the possibility of industrial production of PHB.</abstract><cop>Switzerland</cop><pub>Frontiers Media S.A</pub><pmid>34012957</pmid><doi>10.3389/fbioe.2021.661096</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record>
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subjects araBAD promoter
Bioengineering and Biotechnology
Cupriavidus necator
pH stat feeding strategy
polyhydroxybutyrate
recombinant E. coli
title Polyhydroxybutyrate (PHB) Production Using an Arabinose-Inducible Expression System in Comparison With Cold Shock Inducible Expression System in Escherichia coli
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