Polyhydroxybutyrate (PHB) Production Using an Arabinose-Inducible Expression System in Comparison With Cold Shock Inducible Expression System in Escherichia coli
strain A-04 has shown 16S rRNA gene identity to the well-known industrial strain H16. Nevertheless, the cell characteristics and polyhydroxyalkanoate (PHA) production ability of strain A-04 were different from those of H16. This study aimed to express PHA biosynthesis genes of strain A-04 in via an...
Gespeichert in:
Veröffentlicht in: | Frontiers in bioengineering and biotechnology 2021-05, Vol.9, p.661096-661096 |
---|---|
Hauptverfasser: | , , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 661096 |
---|---|
container_issue | |
container_start_page | 661096 |
container_title | Frontiers in bioengineering and biotechnology |
container_volume | 9 |
creator | Napathorn, Suchada Chanprateep Visetkoop, Sirirat Pinyakong, Onruthai Okano, Kenji Honda, Kohsuke |
description | strain A-04 has shown 16S rRNA gene identity to the well-known industrial strain
H16. Nevertheless, the cell characteristics and polyhydroxyalkanoate (PHA) production ability of
strain A-04 were different from those of
H16. This study aimed to express PHA biosynthesis genes of
strain A-04 in
via an arabinose-inducible expression system. In this study, the PHA biosynthesis operon of
strain A-04, consisting of three genes encoding acetyl-CoA acetyltransferase (
, 1182 bp, 40.6 kDa), acetoacetyl-CoA reductase (
, 741 bp, 26.4 kDa) and PHB synthase Class I (
, 1770 bp), was identified. Sequence analysis of the
,
, and phaC
genes revealed that
was 99% similar to
from
H16. The difference in amino acid residue situated at position 122 of
was proline, whereas that of
H16 was leucine. The intact
operon was cloned into the arabinose-inducible araBAD promoter and transformed into
strains Top 10, JM109 and XL-1 blue. The results showed that optimal conditions obtained from shaken flask experiments yielded 6.1 ± 1.1 g/L cell dry mass (CDM), a PHB content of 93.3 ± 0.9% (w/w) and a productivity of 0.24 g/(L⋅h), whereas the wild-type
strain A-04 accumulated 78% (w/w) PHB with a productivity of 0.09 g/(L⋅h). Finally, for the scaled-up studies, fed-batch cultivations by pH-stat control in a 5-L fermenter of
strains XL1-Blue harboring pBAD/Thio-TOPO-
and pColdTF-
in MR or LB medium, leading to a PHB production of 31.4 ± 0.9 g/L at 54 h with a PHB content of 83.0 ± 3.8% (w/w), a CDM of 37.8 ± 1.2 g/L, a Y
value of 0.39 g PHB/g glucose and a productivity of 0.6 g PHB/(L⋅h) using pColdTF-
in MR medium. In addition, PHB production was 29.0 ± 1.1 g/L with 60.2 ± 2.3% PHB content in the CDM of 53.1 ± 1.0 g/L, a Y
value of 0.21 g PHB/g glucose and a productivity of 0.4 g PHB/(L⋅h) using pBAD/Thio-TOPO-
in LB medium. Thus, a relatively high PHB concentration and productivity were achieved, which demonstrated the possibility of industrial production of PHB. |
doi_str_mv | 10.3389/fbioe.2021.661096 |
format | Article |
fullrecord | <record><control><sourceid>proquest_doaj_</sourceid><recordid>TN_cdi_proquest_miscellaneous_2529948338</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><doaj_id>oai_doaj_org_article_a3b1281b9340493ca3e0fad67b27106c</doaj_id><sourcerecordid>2529948338</sourcerecordid><originalsourceid>FETCH-LOGICAL-c465t-34d5337b6d7e03c0566f6816e702b832964c3475b3da88fe66b5e44f6a6eb4c23</originalsourceid><addsrcrecordid>eNqFks1u1DAUhSMEolXpA7BBXpZFBv8n2SCV0dCOVImRSsXSsp2biUsSD3ZSNY_Dm9bTKVW7YmXfe8_5bF2dLPtI8IKxsvrSGOdhQTElCykJruSb7JjSSuaclOLti_tRdhrjLcaYUFGIkr7PjhhPRSWK4-zvxndzO9fB389mGuegR0Bnm8tvn9Em-Hqyo_MDuolu2CI9oPOgjRt8hHw9pKEzHaDV_S5AjHvd9RxH6JEb0NL3Ox1cTM1fbmxT3dXouvX2N_qPcxVtC8HZ1mlkfec-ZO8a3UU4fTpPspvvq5_Ly_zqx8V6eX6VWy7FmDNeC8YKI-sCMLNYSNnIkkgoMDUlS8vglvFCGFbrsmxASiOA80ZqCYZbyk6y9YFbe32rdsH1OszKa6ceGz5slQ6jsx0ozQyhJTFV2iOvmNUMcKNrWRhaECxtYn09sHaT6aG2MIxBd6-gryeDa9XW36mSUCkFToCzJ0DwfyaIo-pdtNB1egA_RUUFrSpepiAkKTlIbfAxBmienyFY7ZOiHpOi9klRh6Qkz6eX_3t2_MsFewAYIL28</addsrcrecordid><sourcetype>Open Website</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2529948338</pqid></control><display><type>article</type><title>Polyhydroxybutyrate (PHB) Production Using an Arabinose-Inducible Expression System in Comparison With Cold Shock Inducible Expression System in Escherichia coli</title><source>DOAJ Directory of Open Access Journals</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>PubMed Central</source><source>PubMed Central Open Access</source><creator>Napathorn, Suchada Chanprateep ; Visetkoop, Sirirat ; Pinyakong, Onruthai ; Okano, Kenji ; Honda, Kohsuke</creator><creatorcontrib>Napathorn, Suchada Chanprateep ; Visetkoop, Sirirat ; Pinyakong, Onruthai ; Okano, Kenji ; Honda, Kohsuke</creatorcontrib><description>strain A-04 has shown 16S rRNA gene identity to the well-known industrial strain
H16. Nevertheless, the cell characteristics and polyhydroxyalkanoate (PHA) production ability of
strain A-04 were different from those of
H16. This study aimed to express PHA biosynthesis genes of
strain A-04 in
via an arabinose-inducible expression system. In this study, the PHA biosynthesis operon of
strain A-04, consisting of three genes encoding acetyl-CoA acetyltransferase (
, 1182 bp, 40.6 kDa), acetoacetyl-CoA reductase (
, 741 bp, 26.4 kDa) and PHB synthase Class I (
, 1770 bp), was identified. Sequence analysis of the
,
, and phaC
genes revealed that
was 99% similar to
from
H16. The difference in amino acid residue situated at position 122 of
was proline, whereas that of
H16 was leucine. The intact
operon was cloned into the arabinose-inducible araBAD promoter and transformed into
strains Top 10, JM109 and XL-1 blue. The results showed that optimal conditions obtained from shaken flask experiments yielded 6.1 ± 1.1 g/L cell dry mass (CDM), a PHB content of 93.3 ± 0.9% (w/w) and a productivity of 0.24 g/(L⋅h), whereas the wild-type
strain A-04 accumulated 78% (w/w) PHB with a productivity of 0.09 g/(L⋅h). Finally, for the scaled-up studies, fed-batch cultivations by pH-stat control in a 5-L fermenter of
strains XL1-Blue harboring pBAD/Thio-TOPO-
and pColdTF-
in MR or LB medium, leading to a PHB production of 31.4 ± 0.9 g/L at 54 h with a PHB content of 83.0 ± 3.8% (w/w), a CDM of 37.8 ± 1.2 g/L, a Y
value of 0.39 g PHB/g glucose and a productivity of 0.6 g PHB/(L⋅h) using pColdTF-
in MR medium. In addition, PHB production was 29.0 ± 1.1 g/L with 60.2 ± 2.3% PHB content in the CDM of 53.1 ± 1.0 g/L, a Y
value of 0.21 g PHB/g glucose and a productivity of 0.4 g PHB/(L⋅h) using pBAD/Thio-TOPO-
in LB medium. Thus, a relatively high PHB concentration and productivity were achieved, which demonstrated the possibility of industrial production of PHB.</description><identifier>ISSN: 2296-4185</identifier><identifier>EISSN: 2296-4185</identifier><identifier>DOI: 10.3389/fbioe.2021.661096</identifier><identifier>PMID: 34012957</identifier><language>eng</language><publisher>Switzerland: Frontiers Media S.A</publisher><subject>araBAD promoter ; Bioengineering and Biotechnology ; Cupriavidus necator ; pH stat feeding strategy ; polyhydroxybutyrate ; recombinant E. coli</subject><ispartof>Frontiers in bioengineering and biotechnology, 2021-05, Vol.9, p.661096-661096</ispartof><rights>Copyright © 2021 Napathorn, Visetkoop, Pinyakong, Okano and Honda.</rights><rights>Copyright © 2021 Napathorn, Visetkoop, Pinyakong, Okano and Honda. 2021 Napathorn, Visetkoop, Pinyakong, Okano and Honda</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c465t-34d5337b6d7e03c0566f6816e702b832964c3475b3da88fe66b5e44f6a6eb4c23</citedby><cites>FETCH-LOGICAL-c465t-34d5337b6d7e03c0566f6816e702b832964c3475b3da88fe66b5e44f6a6eb4c23</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC8126650/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC8126650/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,2096,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/34012957$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Napathorn, Suchada Chanprateep</creatorcontrib><creatorcontrib>Visetkoop, Sirirat</creatorcontrib><creatorcontrib>Pinyakong, Onruthai</creatorcontrib><creatorcontrib>Okano, Kenji</creatorcontrib><creatorcontrib>Honda, Kohsuke</creatorcontrib><title>Polyhydroxybutyrate (PHB) Production Using an Arabinose-Inducible Expression System in Comparison With Cold Shock Inducible Expression System in Escherichia coli</title><title>Frontiers in bioengineering and biotechnology</title><addtitle>Front Bioeng Biotechnol</addtitle><description>strain A-04 has shown 16S rRNA gene identity to the well-known industrial strain
H16. Nevertheless, the cell characteristics and polyhydroxyalkanoate (PHA) production ability of
strain A-04 were different from those of
H16. This study aimed to express PHA biosynthesis genes of
strain A-04 in
via an arabinose-inducible expression system. In this study, the PHA biosynthesis operon of
strain A-04, consisting of three genes encoding acetyl-CoA acetyltransferase (
, 1182 bp, 40.6 kDa), acetoacetyl-CoA reductase (
, 741 bp, 26.4 kDa) and PHB synthase Class I (
, 1770 bp), was identified. Sequence analysis of the
,
, and phaC
genes revealed that
was 99% similar to
from
H16. The difference in amino acid residue situated at position 122 of
was proline, whereas that of
H16 was leucine. The intact
operon was cloned into the arabinose-inducible araBAD promoter and transformed into
strains Top 10, JM109 and XL-1 blue. The results showed that optimal conditions obtained from shaken flask experiments yielded 6.1 ± 1.1 g/L cell dry mass (CDM), a PHB content of 93.3 ± 0.9% (w/w) and a productivity of 0.24 g/(L⋅h), whereas the wild-type
strain A-04 accumulated 78% (w/w) PHB with a productivity of 0.09 g/(L⋅h). Finally, for the scaled-up studies, fed-batch cultivations by pH-stat control in a 5-L fermenter of
strains XL1-Blue harboring pBAD/Thio-TOPO-
and pColdTF-
in MR or LB medium, leading to a PHB production of 31.4 ± 0.9 g/L at 54 h with a PHB content of 83.0 ± 3.8% (w/w), a CDM of 37.8 ± 1.2 g/L, a Y
value of 0.39 g PHB/g glucose and a productivity of 0.6 g PHB/(L⋅h) using pColdTF-
in MR medium. In addition, PHB production was 29.0 ± 1.1 g/L with 60.2 ± 2.3% PHB content in the CDM of 53.1 ± 1.0 g/L, a Y
value of 0.21 g PHB/g glucose and a productivity of 0.4 g PHB/(L⋅h) using pBAD/Thio-TOPO-
in LB medium. Thus, a relatively high PHB concentration and productivity were achieved, which demonstrated the possibility of industrial production of PHB.</description><subject>araBAD promoter</subject><subject>Bioengineering and Biotechnology</subject><subject>Cupriavidus necator</subject><subject>pH stat feeding strategy</subject><subject>polyhydroxybutyrate</subject><subject>recombinant E. coli</subject><issn>2296-4185</issn><issn>2296-4185</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>DOA</sourceid><recordid>eNqFks1u1DAUhSMEolXpA7BBXpZFBv8n2SCV0dCOVImRSsXSsp2biUsSD3ZSNY_Dm9bTKVW7YmXfe8_5bF2dLPtI8IKxsvrSGOdhQTElCykJruSb7JjSSuaclOLti_tRdhrjLcaYUFGIkr7PjhhPRSWK4-zvxndzO9fB389mGuegR0Bnm8tvn9Em-Hqyo_MDuolu2CI9oPOgjRt8hHw9pKEzHaDV_S5AjHvd9RxH6JEb0NL3Ox1cTM1fbmxT3dXouvX2N_qPcxVtC8HZ1mlkfec-ZO8a3UU4fTpPspvvq5_Ly_zqx8V6eX6VWy7FmDNeC8YKI-sCMLNYSNnIkkgoMDUlS8vglvFCGFbrsmxASiOA80ZqCYZbyk6y9YFbe32rdsH1OszKa6ceGz5slQ6jsx0ozQyhJTFV2iOvmNUMcKNrWRhaECxtYn09sHaT6aG2MIxBd6-gryeDa9XW36mSUCkFToCzJ0DwfyaIo-pdtNB1egA_RUUFrSpepiAkKTlIbfAxBmienyFY7ZOiHpOi9klRh6Qkz6eX_3t2_MsFewAYIL28</recordid><startdate>20210503</startdate><enddate>20210503</enddate><creator>Napathorn, Suchada Chanprateep</creator><creator>Visetkoop, Sirirat</creator><creator>Pinyakong, Onruthai</creator><creator>Okano, Kenji</creator><creator>Honda, Kohsuke</creator><general>Frontiers Media S.A</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20210503</creationdate><title>Polyhydroxybutyrate (PHB) Production Using an Arabinose-Inducible Expression System in Comparison With Cold Shock Inducible Expression System in Escherichia coli</title><author>Napathorn, Suchada Chanprateep ; Visetkoop, Sirirat ; Pinyakong, Onruthai ; Okano, Kenji ; Honda, Kohsuke</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c465t-34d5337b6d7e03c0566f6816e702b832964c3475b3da88fe66b5e44f6a6eb4c23</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>araBAD promoter</topic><topic>Bioengineering and Biotechnology</topic><topic>Cupriavidus necator</topic><topic>pH stat feeding strategy</topic><topic>polyhydroxybutyrate</topic><topic>recombinant E. coli</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Napathorn, Suchada Chanprateep</creatorcontrib><creatorcontrib>Visetkoop, Sirirat</creatorcontrib><creatorcontrib>Pinyakong, Onruthai</creatorcontrib><creatorcontrib>Okano, Kenji</creatorcontrib><creatorcontrib>Honda, Kohsuke</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Frontiers in bioengineering and biotechnology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Napathorn, Suchada Chanprateep</au><au>Visetkoop, Sirirat</au><au>Pinyakong, Onruthai</au><au>Okano, Kenji</au><au>Honda, Kohsuke</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Polyhydroxybutyrate (PHB) Production Using an Arabinose-Inducible Expression System in Comparison With Cold Shock Inducible Expression System in Escherichia coli</atitle><jtitle>Frontiers in bioengineering and biotechnology</jtitle><addtitle>Front Bioeng Biotechnol</addtitle><date>2021-05-03</date><risdate>2021</risdate><volume>9</volume><spage>661096</spage><epage>661096</epage><pages>661096-661096</pages><issn>2296-4185</issn><eissn>2296-4185</eissn><abstract>strain A-04 has shown 16S rRNA gene identity to the well-known industrial strain
H16. Nevertheless, the cell characteristics and polyhydroxyalkanoate (PHA) production ability of
strain A-04 were different from those of
H16. This study aimed to express PHA biosynthesis genes of
strain A-04 in
via an arabinose-inducible expression system. In this study, the PHA biosynthesis operon of
strain A-04, consisting of three genes encoding acetyl-CoA acetyltransferase (
, 1182 bp, 40.6 kDa), acetoacetyl-CoA reductase (
, 741 bp, 26.4 kDa) and PHB synthase Class I (
, 1770 bp), was identified. Sequence analysis of the
,
, and phaC
genes revealed that
was 99% similar to
from
H16. The difference in amino acid residue situated at position 122 of
was proline, whereas that of
H16 was leucine. The intact
operon was cloned into the arabinose-inducible araBAD promoter and transformed into
strains Top 10, JM109 and XL-1 blue. The results showed that optimal conditions obtained from shaken flask experiments yielded 6.1 ± 1.1 g/L cell dry mass (CDM), a PHB content of 93.3 ± 0.9% (w/w) and a productivity of 0.24 g/(L⋅h), whereas the wild-type
strain A-04 accumulated 78% (w/w) PHB with a productivity of 0.09 g/(L⋅h). Finally, for the scaled-up studies, fed-batch cultivations by pH-stat control in a 5-L fermenter of
strains XL1-Blue harboring pBAD/Thio-TOPO-
and pColdTF-
in MR or LB medium, leading to a PHB production of 31.4 ± 0.9 g/L at 54 h with a PHB content of 83.0 ± 3.8% (w/w), a CDM of 37.8 ± 1.2 g/L, a Y
value of 0.39 g PHB/g glucose and a productivity of 0.6 g PHB/(L⋅h) using pColdTF-
in MR medium. In addition, PHB production was 29.0 ± 1.1 g/L with 60.2 ± 2.3% PHB content in the CDM of 53.1 ± 1.0 g/L, a Y
value of 0.21 g PHB/g glucose and a productivity of 0.4 g PHB/(L⋅h) using pBAD/Thio-TOPO-
in LB medium. Thus, a relatively high PHB concentration and productivity were achieved, which demonstrated the possibility of industrial production of PHB.</abstract><cop>Switzerland</cop><pub>Frontiers Media S.A</pub><pmid>34012957</pmid><doi>10.3389/fbioe.2021.661096</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 2296-4185 |
ispartof | Frontiers in bioengineering and biotechnology, 2021-05, Vol.9, p.661096-661096 |
issn | 2296-4185 2296-4185 |
language | eng |
recordid | cdi_proquest_miscellaneous_2529948338 |
source | DOAJ Directory of Open Access Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central; PubMed Central Open Access |
subjects | araBAD promoter Bioengineering and Biotechnology Cupriavidus necator pH stat feeding strategy polyhydroxybutyrate recombinant E. coli |
title | Polyhydroxybutyrate (PHB) Production Using an Arabinose-Inducible Expression System in Comparison With Cold Shock Inducible Expression System in Escherichia coli |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-31T17%3A12%3A41IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_doaj_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Polyhydroxybutyrate%20(PHB)%20Production%20Using%20an%20Arabinose-Inducible%20Expression%20System%20in%20Comparison%20With%20Cold%20Shock%20Inducible%20Expression%20System%20in%20Escherichia%20coli&rft.jtitle=Frontiers%20in%20bioengineering%20and%20biotechnology&rft.au=Napathorn,%20Suchada%20Chanprateep&rft.date=2021-05-03&rft.volume=9&rft.spage=661096&rft.epage=661096&rft.pages=661096-661096&rft.issn=2296-4185&rft.eissn=2296-4185&rft_id=info:doi/10.3389/fbioe.2021.661096&rft_dat=%3Cproquest_doaj_%3E2529948338%3C/proquest_doaj_%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2529948338&rft_id=info:pmid/34012957&rft_doaj_id=oai_doaj_org_article_a3b1281b9340493ca3e0fad67b27106c&rfr_iscdi=true |