Morphological and molecular characterization of Eustrongylides excisus larvae (Nematoda: Dioctophymatidae) in Sander lucioperca (L.) from Northern Turkey
The genus Eustrongylides Jägerskiöld, 1909 includes parasitic nematodes (Dioctophymatidae) affecting various fish species and piscivorous birds of freshwater ecosystems. Currently, there is little information on the molecular characterization of E. excisus based on nuclear ribosomal internal transcr...
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| Veröffentlicht in: | Parasitology research (1987) 2021-06, Vol.120 (6), p.2269-2274 |
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| creator | Pekmezci, Gokmen Zafer Bolukbas, Cenk Soner |
| description | The genus
Eustrongylides
Jägerskiöld, 1909 includes parasitic nematodes (Dioctophymatidae) affecting various fish species and piscivorous birds of freshwater ecosystems. Currently, there is little information on the molecular characterization of
E. excisus
based on nuclear ribosomal internal transcribed spacer (ITS) rDNA regions. However, before the present study, there had been no reports of characterizing the
E. excisus
using nuclear small subunit ribosomal RNA (SSU rRNA) and mitochondrial cytochrome
c
oxidase subunit I (COI) genes sequences. In the present study,
Eustrongylides
spp. larvae were collected from pike-perch
Sander lucioperca
(L.) in Northern Turkey, and characterized by sequencing of ITS regions, SSU rRNA, and COI markers. Larvae herein morphologically identified as the fourth stage of
Eustrongylides
spp. were genetically identified as
E. excisus
based on the ITS sequence analysis. This study is the first record of SSU rRNA and COI sequences for
E. excisus
in GenBank. This is also a molecular characterization of
E. excisus
for the first time in Turkey. The ITS, SSU rRNA, and COI sequences of
E. excisus
can be used to establish the phylogenetic relationships of
Eustrongylides
species from Turkey and worldwide for further studies. |
| doi_str_mv | 10.1007/s00436-021-07187-8 |
| format | Article |
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Eustrongylides
Jägerskiöld, 1909 includes parasitic nematodes (Dioctophymatidae) affecting various fish species and piscivorous birds of freshwater ecosystems. Currently, there is little information on the molecular characterization of
E. excisus
based on nuclear ribosomal internal transcribed spacer (ITS) rDNA regions. However, before the present study, there had been no reports of characterizing the
E. excisus
using nuclear small subunit ribosomal RNA (SSU rRNA) and mitochondrial cytochrome
c
oxidase subunit I (COI) genes sequences. In the present study,
Eustrongylides
spp. larvae were collected from pike-perch
Sander lucioperca
(L.) in Northern Turkey, and characterized by sequencing of ITS regions, SSU rRNA, and COI markers. Larvae herein morphologically identified as the fourth stage of
Eustrongylides
spp. were genetically identified as
E. excisus
based on the ITS sequence analysis. This study is the first record of SSU rRNA and COI sequences for
E. excisus
in GenBank. This is also a molecular characterization of
E. excisus
for the first time in Turkey. The ITS, SSU rRNA, and COI sequences of
E. excisus
can be used to establish the phylogenetic relationships of
Eustrongylides
species from Turkey and worldwide for further studies.</description><identifier>ISSN: 0932-0113</identifier><identifier>EISSN: 1432-1955</identifier><identifier>DOI: 10.1007/s00436-021-07187-8</identifier><identifier>PMID: 34002260</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Biomedical and Life Sciences ; Biomedicine ; Cytochrome-c oxidase ; Dioctophymatidae ; Eustrongylides ; Fish Parasitology - Short Communication ; Freshwater ecosystems ; Immunology ; Larvae ; Medical Microbiology ; Microbiology ; Mitochondria ; Phylogeny ; Protozoa ; rRNA ; Sander lucioperca ; Sequence analysis</subject><ispartof>Parasitology research (1987), 2021-06, Vol.120 (6), p.2269-2274</ispartof><rights>The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature 2021</rights><rights>The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature 2021.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c375t-f8b1b74f354a7233e7a71239a4a50ca2442c7bd79b549ab579e7ab51036e7b6a3</citedby><cites>FETCH-LOGICAL-c375t-f8b1b74f354a7233e7a71239a4a50ca2442c7bd79b549ab579e7ab51036e7b6a3</cites><orcidid>0000-0002-4863-696X ; 0000-0002-7791-1959</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00436-021-07187-8$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00436-021-07187-8$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/34002260$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Pekmezci, Gokmen Zafer</creatorcontrib><creatorcontrib>Bolukbas, Cenk Soner</creatorcontrib><title>Morphological and molecular characterization of Eustrongylides excisus larvae (Nematoda: Dioctophymatidae) in Sander lucioperca (L.) from Northern Turkey</title><title>Parasitology research (1987)</title><addtitle>Parasitol Res</addtitle><addtitle>Parasitol Res</addtitle><description>The genus
Eustrongylides
Jägerskiöld, 1909 includes parasitic nematodes (Dioctophymatidae) affecting various fish species and piscivorous birds of freshwater ecosystems. Currently, there is little information on the molecular characterization of
E. excisus
based on nuclear ribosomal internal transcribed spacer (ITS) rDNA regions. However, before the present study, there had been no reports of characterizing the
E. excisus
using nuclear small subunit ribosomal RNA (SSU rRNA) and mitochondrial cytochrome
c
oxidase subunit I (COI) genes sequences. In the present study,
Eustrongylides
spp. larvae were collected from pike-perch
Sander lucioperca
(L.) in Northern Turkey, and characterized by sequencing of ITS regions, SSU rRNA, and COI markers. Larvae herein morphologically identified as the fourth stage of
Eustrongylides
spp. were genetically identified as
E. excisus
based on the ITS sequence analysis. This study is the first record of SSU rRNA and COI sequences for
E. excisus
in GenBank. This is also a molecular characterization of
E. excisus
for the first time in Turkey. The ITS, SSU rRNA, and COI sequences of
E. excisus
can be used to establish the phylogenetic relationships of
Eustrongylides
species from Turkey and worldwide for further studies.</description><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>Cytochrome-c oxidase</subject><subject>Dioctophymatidae</subject><subject>Eustrongylides</subject><subject>Fish Parasitology - Short Communication</subject><subject>Freshwater ecosystems</subject><subject>Immunology</subject><subject>Larvae</subject><subject>Medical Microbiology</subject><subject>Microbiology</subject><subject>Mitochondria</subject><subject>Phylogeny</subject><subject>Protozoa</subject><subject>rRNA</subject><subject>Sander lucioperca</subject><subject>Sequence analysis</subject><issn>0932-0113</issn><issn>1432-1955</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><recordid>eNp9kU1v1DAQhi0EotvCH-CALHHZHlL8GSfcUCkf0lIOlHM0cSa7Lkmc2jFi-0_4t7hsAYkDJ488z7wz0kPIM87OOGPmZWRMybJgghfM8MoU1QOy4kqKgtdaPyQrVueacS6PyHGM14xxUyr1mBxJxZgQJVuRHx99mHd-8FtnYaAwdXT0A9o0QKB2BwHsgsHdwuL8RH1PL1Jcgp-2-8F1GCl-ty6mSDP-DZCuL3GExXfwir5x3i5-3u3zh-sAT6mb6Oe8AAMdknV-xmCBrjdnp7QPfqSXPiw7DBO9SuEr7p-QRz0MEZ_evyfky9uLq_P3xebTuw_nrzeFlUYvRV-1vDWql1qBEVKiAcOFrEGBZhaEUsKatjN1q1UNrTZ1JlrNmSzRtCXIE7I-5M7B3ySMSzO6aHEYYEKfYiO0qCquhZYZffEPeu1TmPJ1mZKVFJyrKlPiQNngYwzYN3NwI4R9w1lzJ645iGuyuOaXuOZu6Pl9dGpH7P6M_DaVAXkAYm5NWwx_d_8n9ic1B6Un</recordid><startdate>20210601</startdate><enddate>20210601</enddate><creator>Pekmezci, Gokmen Zafer</creator><creator>Bolukbas, Cenk Soner</creator><general>Springer Berlin Heidelberg</general><general>Springer Nature B.V</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-4863-696X</orcidid><orcidid>https://orcid.org/0000-0002-7791-1959</orcidid></search><sort><creationdate>20210601</creationdate><title>Morphological and molecular characterization of Eustrongylides excisus larvae (Nematoda: Dioctophymatidae) in Sander lucioperca (L.) from Northern Turkey</title><author>Pekmezci, Gokmen Zafer ; Bolukbas, Cenk Soner</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c375t-f8b1b74f354a7233e7a71239a4a50ca2442c7bd79b549ab579e7ab51036e7b6a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Biomedical and Life Sciences</topic><topic>Biomedicine</topic><topic>Cytochrome-c oxidase</topic><topic>Dioctophymatidae</topic><topic>Eustrongylides</topic><topic>Fish Parasitology - Short Communication</topic><topic>Freshwater ecosystems</topic><topic>Immunology</topic><topic>Larvae</topic><topic>Medical Microbiology</topic><topic>Microbiology</topic><topic>Mitochondria</topic><topic>Phylogeny</topic><topic>Protozoa</topic><topic>rRNA</topic><topic>Sander lucioperca</topic><topic>Sequence analysis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Pekmezci, Gokmen Zafer</creatorcontrib><creatorcontrib>Bolukbas, Cenk Soner</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Parasitology research (1987)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Pekmezci, Gokmen Zafer</au><au>Bolukbas, Cenk Soner</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Morphological and molecular characterization of Eustrongylides excisus larvae (Nematoda: Dioctophymatidae) in Sander lucioperca (L.) from Northern Turkey</atitle><jtitle>Parasitology research (1987)</jtitle><stitle>Parasitol Res</stitle><addtitle>Parasitol Res</addtitle><date>2021-06-01</date><risdate>2021</risdate><volume>120</volume><issue>6</issue><spage>2269</spage><epage>2274</epage><pages>2269-2274</pages><issn>0932-0113</issn><eissn>1432-1955</eissn><abstract>The genus
Eustrongylides
Jägerskiöld, 1909 includes parasitic nematodes (Dioctophymatidae) affecting various fish species and piscivorous birds of freshwater ecosystems. Currently, there is little information on the molecular characterization of
E. excisus
based on nuclear ribosomal internal transcribed spacer (ITS) rDNA regions. However, before the present study, there had been no reports of characterizing the
E. excisus
using nuclear small subunit ribosomal RNA (SSU rRNA) and mitochondrial cytochrome
c
oxidase subunit I (COI) genes sequences. In the present study,
Eustrongylides
spp. larvae were collected from pike-perch
Sander lucioperca
(L.) in Northern Turkey, and characterized by sequencing of ITS regions, SSU rRNA, and COI markers. Larvae herein morphologically identified as the fourth stage of
Eustrongylides
spp. were genetically identified as
E. excisus
based on the ITS sequence analysis. This study is the first record of SSU rRNA and COI sequences for
E. excisus
in GenBank. This is also a molecular characterization of
E. excisus
for the first time in Turkey. The ITS, SSU rRNA, and COI sequences of
E. excisus
can be used to establish the phylogenetic relationships of
Eustrongylides
species from Turkey and worldwide for further studies.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>34002260</pmid><doi>10.1007/s00436-021-07187-8</doi><tpages>6</tpages><orcidid>https://orcid.org/0000-0002-4863-696X</orcidid><orcidid>https://orcid.org/0000-0002-7791-1959</orcidid></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 0932-0113 |
| ispartof | Parasitology research (1987), 2021-06, Vol.120 (6), p.2269-2274 |
| issn | 0932-0113 1432-1955 |
| language | eng |
| recordid | cdi_proquest_miscellaneous_2528815253 |
| source | SpringerLink Journals |
| subjects | Biomedical and Life Sciences Biomedicine Cytochrome-c oxidase Dioctophymatidae Eustrongylides Fish Parasitology - Short Communication Freshwater ecosystems Immunology Larvae Medical Microbiology Microbiology Mitochondria Phylogeny Protozoa rRNA Sander lucioperca Sequence analysis |
| title | Morphological and molecular characterization of Eustrongylides excisus larvae (Nematoda: Dioctophymatidae) in Sander lucioperca (L.) from Northern Turkey |
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