Structural studies of hemoglobin from two flightless birds, ostrich and turkey: insights into their differing oxygen‐binding properties

Crystal structures of hemoglobin (Hb) from two flightless birds, ostrich (Struthio camelus) and turkey (Meleagris gallopova), were determined. The ostrich Hb structure was solved to a resolution of 2.22 Å, whereas two forms of turkey Hb were solved to resolutions of 1.66 Å (turkey monoclinic structu...

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Veröffentlicht in:Acta crystallographica. Section D, Biological crystallography. Biological crystallography., 2021-05, Vol.77 (5), p.690-702
Hauptverfasser: Ramesh, Pandian, Sundaresan, Selvarajan Sigamani, Shobana, Nagaraj, Vinuchakkaravarthy, Thangaraj, Sivakumar, Kandasamy, Yasien, Sayed, Ponnuswamy, Mondikalipudur Nanjappa Gounder
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container_issue 5
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container_title Acta crystallographica. Section D, Biological crystallography.
container_volume 77
creator Ramesh, Pandian
Sundaresan, Selvarajan Sigamani
Shobana, Nagaraj
Vinuchakkaravarthy, Thangaraj
Sivakumar, Kandasamy
Yasien, Sayed
Ponnuswamy, Mondikalipudur Nanjappa Gounder
description Crystal structures of hemoglobin (Hb) from two flightless birds, ostrich (Struthio camelus) and turkey (Meleagris gallopova), were determined. The ostrich Hb structure was solved to a resolution of 2.22 Å, whereas two forms of turkey Hb were solved to resolutions of 1.66 Å (turkey monoclinic structure; TMS) and 1.39 Å (turkey orthorhombic structure; TOS). Comparison of the amino‐acid sequences of ostrich and turkey Hb with those from other avian species revealed no difference in the number of charged residues, but variations were observed in the numbers of hydrophobic and polar residues. Amino‐acid‐composition‐based computation of various physical parameters, in particular their lower inverse transition temperatures and higher average hydrophobicities, indicated that the structures of ostrich and turkey Hb are likely to be highly ordered when compared with other avian Hbs. From the crystal structure analysis, the liganded state of ostrich Hb was confirmed by the presence of an oxygen molecule between the Fe atom and the proximal histidine residue in all four heme regions. In turkey Hb (both TMS and TOS), a water molecule was bound instead of an oxygen molecule in all four heme regions, thus confirming that they assumed the aqua‐met form. Analysis of tertiary‐ and quaternary‐structural features led to the conclusion that ostrich oxy Hb and turkey aqua‐met Hb adopt the R‐/RH‐state conformation. The crystal structures of hemoglobin from two flightless birds, ostrich at 2.22 Å resolution and turkey in a monoclinic form at 1.66 Å resolution and in an orthorhombic form at 1.39 Å resolution, are reported and their sequential and structural features are interpreted.
doi_str_mv 10.1107/S2059798321003417
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Section D, Biological crystallography.</jtitle><addtitle>Acta Crystallogr D Struct Biol</addtitle><date>2021-05</date><risdate>2021</risdate><volume>77</volume><issue>5</issue><spage>690</spage><epage>702</epage><pages>690-702</pages><issn>2059-7983</issn><issn>0907-4449</issn><eissn>2059-7983</eissn><eissn>1399-0047</eissn><abstract>Crystal structures of hemoglobin (Hb) from two flightless birds, ostrich (Struthio camelus) and turkey (Meleagris gallopova), were determined. The ostrich Hb structure was solved to a resolution of 2.22 Å, whereas two forms of turkey Hb were solved to resolutions of 1.66 Å (turkey monoclinic structure; TMS) and 1.39 Å (turkey orthorhombic structure; TOS). Comparison of the amino‐acid sequences of ostrich and turkey Hb with those from other avian species revealed no difference in the number of charged residues, but variations were observed in the numbers of hydrophobic and polar residues. Amino‐acid‐composition‐based computation of various physical parameters, in particular their lower inverse transition temperatures and higher average hydrophobicities, indicated that the structures of ostrich and turkey Hb are likely to be highly ordered when compared with other avian Hbs. From the crystal structure analysis, the liganded state of ostrich Hb was confirmed by the presence of an oxygen molecule between the Fe atom and the proximal histidine residue in all four heme regions. In turkey Hb (both TMS and TOS), a water molecule was bound instead of an oxygen molecule in all four heme regions, thus confirming that they assumed the aqua‐met form. Analysis of tertiary‐ and quaternary‐structural features led to the conclusion that ostrich oxy Hb and turkey aqua‐met Hb adopt the R‐/RH‐state conformation. The crystal structures of hemoglobin from two flightless birds, ostrich at 2.22 Å resolution and turkey in a monoclinic form at 1.66 Å resolution and in an orthorhombic form at 1.39 Å resolution, are reported and their sequential and structural features are interpreted.</abstract><cop>5 Abbey Square, Chester, Cheshire CH1 2HU, England</cop><pub>International Union of Crystallography</pub><pmid>33950023</pmid><doi>10.1107/S2059798321003417</doi><tpages>13</tpages><orcidid>https://orcid.org/0000-0001-9060-6337</orcidid><orcidid>https://orcid.org/0000-0002-1781-2115</orcidid><orcidid>https://orcid.org/0000-0001-8871-1082</orcidid><orcidid>https://orcid.org/0000-0002-4947-7243</orcidid><orcidid>https://orcid.org/0000-0002-9848-0123</orcidid><orcidid>https://orcid.org/0000-0003-1220-2999</orcidid></addata></record>
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source Wiley Online Library Journals Frontfile Complete; Alma/SFX Local Collection
subjects Conformation
Crystal structure
flightless birds
Heme
Hemoglobin
Histidine
Hydrophobicity
ostrich
Oxygen
oxygen affinity
Physical properties
Residues
Structural analysis
turkey
Turkeys
Water chemistry
title Structural studies of hemoglobin from two flightless birds, ostrich and turkey: insights into their differing oxygen‐binding properties
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