Benchmark ab initio proton affinity of glycine
A systematic conformational search reveals three N- (amino) and eight O- (carbonyl) protonated glycine conformers with benchmark equilibrium(adiabatic) relative energies in the 0.00-7.51(0.00-7.37) and 25.91-31.61(24.45-30.28) kcal mol-1 ranges, respectively. Benchmark ab initio structures of the gl...
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Veröffentlicht in: | Physical chemistry chemical physics : PCCP 2021-04, Vol.23 (16), p.9663-9671 |
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description | A systematic conformational search reveals three N- (amino) and eight O- (carbonyl) protonated glycine conformers with benchmark equilibrium(adiabatic) relative energies in the 0.00-7.51(0.00-7.37) and 25.91-31.61(24.45-30.28) kcal mol-1 ranges, respectively. Benchmark ab initio structures of the glycine conformers and its protonated species are obtained at the CCSD(T)-F12b/aug-cc-pVTZ level of theory and the relative energy computations consider basis-set effects up to aug-cc-pVQZ with CCSD(T)-F12b, electron correlation up to CCSDT(Q), core correlation corrections, scalar relativistic effects, and zero-point energy contributions. The best predictions for Boltzmann-averaged 0(298.15) K proton affinities and [298.15 K gas-phase basicities] of glycine are 211.00(212.43)[204.75] and 186.38(187.64)[180.21] kcal mol-1 for N- and O-protonation, respectively, in excellent agreement with experiments. |
doi_str_mv | 10.1039/d1cp00376c |
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Benchmark ab initio structures of the glycine conformers and its protonated species are obtained at the CCSD(T)-F12b/aug-cc-pVTZ level of theory and the relative energy computations consider basis-set effects up to aug-cc-pVQZ with CCSD(T)-F12b, electron correlation up to CCSDT(Q), core correlation corrections, scalar relativistic effects, and zero-point energy contributions. The best predictions for Boltzmann-averaged 0(298.15) K proton affinities and [298.15 K gas-phase basicities] of glycine are 211.00(212.43)[204.75] and 186.38(187.64)[180.21] kcal mol-1 for N- and O-protonation, respectively, in excellent agreement with experiments.</description><identifier>ISSN: 1463-9076</identifier><identifier>EISSN: 1463-9084</identifier><identifier>DOI: 10.1039/d1cp00376c</identifier><identifier>PMID: 33908507</identifier><language>eng</language><publisher>England: Royal Society of Chemistry</publisher><subject>Affinity ; Benchmarks ; Carbonyls ; Glycine ; Protonation ; Protons ; Relativistic effects ; Zero point energy</subject><ispartof>Physical chemistry chemical physics : PCCP, 2021-04, Vol.23 (16), p.9663-9671</ispartof><rights>Copyright Royal Society of Chemistry 2021</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c318t-954a7326d7d22fcc0d4a4358aa4b84d4dd0a34b86c1454efe3350dd7732a8dab3</citedby><cites>FETCH-LOGICAL-c318t-954a7326d7d22fcc0d4a4358aa4b84d4dd0a34b86c1454efe3350dd7732a8dab3</cites><orcidid>0000-0001-5136-4777</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33908507$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Nacsa, András B</creatorcontrib><creatorcontrib>Czakó, Gábor</creatorcontrib><title>Benchmark ab initio proton affinity of glycine</title><title>Physical chemistry chemical physics : PCCP</title><addtitle>Phys Chem Chem Phys</addtitle><description>A systematic conformational search reveals three N- (amino) and eight O- (carbonyl) protonated glycine conformers with benchmark equilibrium(adiabatic) relative energies in the 0.00-7.51(0.00-7.37) and 25.91-31.61(24.45-30.28) kcal mol-1 ranges, respectively. Benchmark ab initio structures of the glycine conformers and its protonated species are obtained at the CCSD(T)-F12b/aug-cc-pVTZ level of theory and the relative energy computations consider basis-set effects up to aug-cc-pVQZ with CCSD(T)-F12b, electron correlation up to CCSDT(Q), core correlation corrections, scalar relativistic effects, and zero-point energy contributions. The best predictions for Boltzmann-averaged 0(298.15) K proton affinities and [298.15 K gas-phase basicities] of glycine are 211.00(212.43)[204.75] and 186.38(187.64)[180.21] kcal mol-1 for N- and O-protonation, respectively, in excellent agreement with experiments.</description><subject>Affinity</subject><subject>Benchmarks</subject><subject>Carbonyls</subject><subject>Glycine</subject><subject>Protonation</subject><subject>Protons</subject><subject>Relativistic effects</subject><subject>Zero point energy</subject><issn>1463-9076</issn><issn>1463-9084</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><recordid>eNpdkElPwzAQhS0EoqVw4QegSFwQUsrYY2c5QlilSnCAc-R4gZQ0LnFy6L_HXeiB0zyNvnl68wg5pzClgPmNpmoJgGmiDsiY8gTjHDJ-uNdpMiIn3s8BgAqKx2SEGAgB6ZhM70yrvhay-45kFdVt3dcuWnaud20krV0vVpGz0WezUnVrTsmRlY03Z7s5IR-PD-_Fczx7fXopbmexQpr1cS64TJElOtWMWaVAc8lRZFLyKuOaaw0Sg0wU5YIbaxAFaJ2GG5lpWeGEXG19Q5Sfwfi-XNRemaaRrXGDL5mgOVLGWBLQy3_o3A1dG9JtKMYFgzxQ11tKdc77zthy2dXh7VVJoVy3WN7T4m3TYhHgi53lUC2M3qN_teEvHORqsQ</recordid><startdate>20210428</startdate><enddate>20210428</enddate><creator>Nacsa, András B</creator><creator>Czakó, Gábor</creator><general>Royal Society of Chemistry</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SR</scope><scope>7U5</scope><scope>8BQ</scope><scope>8FD</scope><scope>JG9</scope><scope>L7M</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0001-5136-4777</orcidid></search><sort><creationdate>20210428</creationdate><title>Benchmark ab initio proton affinity of glycine</title><author>Nacsa, András B ; Czakó, Gábor</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c318t-954a7326d7d22fcc0d4a4358aa4b84d4dd0a34b86c1454efe3350dd7732a8dab3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Affinity</topic><topic>Benchmarks</topic><topic>Carbonyls</topic><topic>Glycine</topic><topic>Protonation</topic><topic>Protons</topic><topic>Relativistic effects</topic><topic>Zero point energy</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Nacsa, András B</creatorcontrib><creatorcontrib>Czakó, Gábor</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Engineered Materials Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Materials Research Database</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>MEDLINE - Academic</collection><jtitle>Physical chemistry chemical physics : PCCP</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Nacsa, András B</au><au>Czakó, Gábor</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Benchmark ab initio proton affinity of glycine</atitle><jtitle>Physical chemistry chemical physics : PCCP</jtitle><addtitle>Phys Chem Chem Phys</addtitle><date>2021-04-28</date><risdate>2021</risdate><volume>23</volume><issue>16</issue><spage>9663</spage><epage>9671</epage><pages>9663-9671</pages><issn>1463-9076</issn><eissn>1463-9084</eissn><abstract>A systematic conformational search reveals three N- (amino) and eight O- (carbonyl) protonated glycine conformers with benchmark equilibrium(adiabatic) relative energies in the 0.00-7.51(0.00-7.37) and 25.91-31.61(24.45-30.28) kcal mol-1 ranges, respectively. Benchmark ab initio structures of the glycine conformers and its protonated species are obtained at the CCSD(T)-F12b/aug-cc-pVTZ level of theory and the relative energy computations consider basis-set effects up to aug-cc-pVQZ with CCSD(T)-F12b, electron correlation up to CCSDT(Q), core correlation corrections, scalar relativistic effects, and zero-point energy contributions. The best predictions for Boltzmann-averaged 0(298.15) K proton affinities and [298.15 K gas-phase basicities] of glycine are 211.00(212.43)[204.75] and 186.38(187.64)[180.21] kcal mol-1 for N- and O-protonation, respectively, in excellent agreement with experiments.</abstract><cop>England</cop><pub>Royal Society of Chemistry</pub><pmid>33908507</pmid><doi>10.1039/d1cp00376c</doi><tpages>9</tpages><orcidid>https://orcid.org/0000-0001-5136-4777</orcidid><oa>free_for_read</oa></addata></record> |
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source | Royal Society Of Chemistry Journals 2008-; Alma/SFX Local Collection |
subjects | Affinity Benchmarks Carbonyls Glycine Protonation Protons Relativistic effects Zero point energy |
title | Benchmark ab initio proton affinity of glycine |
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