The role of melanocytes in the human choroidal microenvironment and inflammation: Insights from the transcriptome

The choroid within the human eye contains a rich milieu of cells including melanocytes. Human choroidal melanocytes (HCMs) absorb light, regulate free radical production, and were recently shown to modulate inflammation. This study aimed to identify key genes and pathways involved in the inflammator...

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Veröffentlicht in:Pigment cell and melanoma research 2021-09, Vol.34 (5), p.928-945
Hauptverfasser: Cioanca, Adrian V., Wu, Chieh‐Lin (Stanley), Natoli, Riccardo, Conway, R. Max, McCluskey, Peter J., Jager, Martine J, Sitiwin, Ephrem I., Eamegdool, Steven S., Madigan, Michele C.
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container_issue 5
container_start_page 928
container_title Pigment cell and melanoma research
container_volume 34
creator Cioanca, Adrian V.
Wu, Chieh‐Lin (Stanley)
Natoli, Riccardo
Conway, R. Max
McCluskey, Peter J.
Jager, Martine J
Sitiwin, Ephrem I.
Eamegdool, Steven S.
Madigan, Michele C.
description The choroid within the human eye contains a rich milieu of cells including melanocytes. Human choroidal melanocytes (HCMs) absorb light, regulate free radical production, and were recently shown to modulate inflammation. This study aimed to identify key genes and pathways involved in the inflammatory response of HCMs through the use of RNA‐seq. Primary HCMs were cultured from donor choroids, RNA was extracted from control and lipopolysaccharide (LPS)‐treated HCMs, and mRNA was sequenced. Functional annotation and pathway analysis were performed using gene ontology and gene set enrichment analyses. Representative RNA‐seq results were verified with RT‐qPCR and protein measurements. We detected 100 differentially expressed genes including an array of CCL and CXCL cytokines and mediators of cell–cell and cell–matrix adhesion, such as ICAM1, CLDN1, CCN3, ITGA1 and ITGA11. Functional annotation showed that these gene sets control inflammatory pathways, immune cell trafficking, cell–cell adhesion, interactions with the extracellular matrix and blood vessels, angiogenesis and epithelial‐to‐mesenchymal transitions. Our study provides insights into the transcriptional regulation of primary HCMs in response to inflammatory stimuli and identifies novel melanocyte‐driven mechanisms potentially involved in choroidal homeostasis and inflammation.
doi_str_mv 10.1111/pcmr.12972
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Representative RNA‐seq results were verified with RT‐qPCR and protein measurements. We detected 100 differentially expressed genes including an array of CCL and CXCL cytokines and mediators of cell–cell and cell–matrix adhesion, such as ICAM1, CLDN1, CCN3, ITGA1 and ITGA11. Functional annotation showed that these gene sets control inflammatory pathways, immune cell trafficking, cell–cell adhesion, interactions with the extracellular matrix and blood vessels, angiogenesis and epithelial‐to‐mesenchymal transitions. 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source MEDLINE; Wiley Online Library Journals Frontfile Complete
subjects Adhesion
Angiogenesis
Annotations
Blood vessels
Cell adhesion
Cellular Microenvironment
choroid
Choroid - cytology
Choroid - metabolism
Cytokines
Extracellular matrix
Free radicals
Gene regulation
Genes
Homeostasis
Humans
Immune system
Inflammation
Inflammatory response
Intercellular adhesion molecule 1
Knowledge representation
Lipopolysaccharides
melanocortin receptor 1
Melanocytes
Melanocytes - cytology
Melanocytes - metabolism
Mesenchyme
Microenvironments
Ribonucleic acid
RNA
RNA-Seq
Transcription
Transcriptome
Transcriptomes
vasculature
title The role of melanocytes in the human choroidal microenvironment and inflammation: Insights from the transcriptome
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